RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 NDUFA11Q86Y39 141 aa10.37□□□□□ -0.75
SSB-203ENST00000413002 GVQW1Q8N7I0 195 aa10.37□□□□□ -0.75
SSB-203ENST00000413002 R3HDM4Q96D70 268 aa10.37□□□□□ -0.75
SSB-203ENST00000413002 C5orf30Q96GV9 206 aa10.37□□□□□ -0.75
SSB-203ENST00000413002 GINS4Q9BRT9 223 aa10.37□□□□□ -0.75
SSB-203ENST00000413002 OR2D2Q9H210 308 aa10.37□□□□□ -0.75
SSB-203ENST00000413002 LIN7CQ9NUP9 197 aaKnown RBP10.37□□□□□ -0.75
SSB-203ENST00000413002 SPATA2Q9UM82 520 aa10.37□□□□□ -0.75
SSB-203ENST00000413002 CMYA5Q8N3K9 4069 aa10.36□□□□□ -0.75
SSB-203ENST00000413002 MEIS3P1A6NDR6 274 aa10.36□□□□□ -0.75
SSB-203ENST00000413002 NFYAP23511 347 aaPredicted RBP10.36□□□□□ -0.75
SSB-203ENST00000413002 DTYMKP23919 212 aa10.36□□□□□ -0.75
SSB-203ENST00000413002 SOX6P35712 828 aa10.36□□□□□ -0.75
SSB-203ENST00000413002 GPR107Q5VW38 600 aa10.36□□□□□ -0.75
SSB-203ENST00000413002 LCNL1Q6ZST4 164 aa10.36□□□□□ -0.75
SSB-203ENST00000413002 C1QL4Q86Z23 238 aa10.36□□□□□ -0.75
SSB-203ENST00000413002 STPG2Q8N412 459 aa10.36□□□□□ -0.75
SSB-203ENST00000413002 SAMD12Q8N8I0 201 aa10.36□□□□□ -0.75
SSB-203ENST00000413002 ZNF383Q8NA42 475 aa10.36□□□□□ -0.75
SSB-203ENST00000413002 OR4X2Q8NGF9 303 aa10.36□□□□□ -0.75
SSB-203ENST00000413002 OR8H1Q8NGG4 311 aa10.36□□□□□ -0.75
SSB-203ENST00000413002 AUNIPQ9H7T9 357 aa10.36□□□□□ -0.75
SSB-203ENST00000413002 DIABLOQ9NR28 239 aa10.36□□□□□ -0.75
SSB-203ENST00000413002 RBM7Q9Y580 266 aaKnown RBP10.36□□□□□ -0.75
SSB-203ENST00000413002 NOTCH1P46531 2555 aa10.36□□□□□ -0.75
SSB-203ENST00000413002 NBR2O15453 112 aa10.35□□□□□ -0.75
SSB-203ENST00000413002 SCGNO76038 276 aa10.35□□□□□ -0.75
SSB-203ENST00000413002 SCAND1P57086 179 aa10.35□□□□□ -0.75
SSB-203ENST00000413002 PNLIPRP3Q17RR3 467 aa10.35□□□□□ -0.75
SSB-203ENST00000413002 FAM71F2Q6NXP2 309 aa10.35□□□□□ -0.75
SSB-203ENST00000413002 Q6ZS49 121 aa10.35□□□□□ -0.75
SSB-203ENST00000413002 C18orf65Q6ZTR6 163 aa10.35□□□□□ -0.75
SSB-203ENST00000413002 FOXRED2Q8IWF2 684 aa10.35□□□□□ -0.75
SSB-203ENST00000413002 H1FOOQ8IZA3 346 aaPredicted RBP10.35□□□□□ -0.75
SSB-203ENST00000413002 SLC25A46Q96AG3 418 aa10.35□□□□□ -0.75
SSB-203ENST00000413002 CLCC1Q96S66 551 aa10.35□□□□□ -0.75
SSB-203ENST00000413002 TOLLIPQ9H0E2 274 aa10.35□□□□□ -0.75
SSB-203ENST00000413002 FBXL15Q9H469 300 aa10.35□□□□□ -0.75
SSB-203ENST00000413002 SDHAF2Q9NX18 166 aa10.35□□□□□ -0.75
SSB-203ENST00000413002 COMMD3Q9UBI1 195 aa10.35□□□□□ -0.75
SSB-203ENST00000413002 ZNF107Q9UII5 783 aaPredicted RBP10.35□□□□□ -0.75
SSB-203ENST00000413002 WSB1Q9Y6I7 421 aa10.35□□□□□ -0.75
SSB-203ENST00000413002 OR5H14A6NHG9 310 aa10.34□□□□□ -0.75
SSB-203ENST00000413002 AP4M1O00189 453 aa10.34□□□□□ -0.75
SSB-203ENST00000413002 FCN1O00602 326 aa10.34□□□□□ -0.75
SSB-203ENST00000413002 IGKV1-16P04430 117 aa10.34□□□□□ -0.75
SSB-203ENST00000413002 TFAP2AP05549 437 aa10.34□□□□□ -0.75
SSB-203ENST00000413002 PITPNAQ00169 270 aa10.34□□□□□ -0.75
SSB-203ENST00000413002 CTF1Q16619 201 aa10.34□□□□□ -0.75
SSB-203ENST00000413002 SRSF7Q16629 238 aaKnown RBP eCLIP10.34□□□□□ -0.75
SSB-203ENST00000413002 C5orf64Q2M2E5 130 aa10.34□□□□□ -0.75
SSB-203ENST00000413002 CROCCP3Q8IVE0 287 aa10.34□□□□□ -0.75
SSB-203ENST00000413002 OR5AN1Q8NGI8 311 aa10.34□□□□□ -0.75
SSB-203ENST00000413002 CHPT1Q8WUD6 406 aa10.34□□□□□ -0.75
SSB-203ENST00000413002 MRPS26Q9BYN8 205 aaKnown RBP10.34□□□□□ -0.75
SSB-203ENST00000413002 DCSTAMPQ9H295 470 aa10.34□□□□□ -0.75
SSB-203ENST00000413002 GHITMQ9H3K2 345 aa10.34□□□□□ -0.75
SSB-203ENST00000413002 ANXA10Q9UJ72 324 aa10.34□□□□□ -0.75
SSB-203ENST00000413002 WASHC3Q9Y3C0 194 aa10.34□□□□□ -0.75
SSB-203ENST00000413002 EIF4EP06730 217 aaKnown RBP10.33□□□□□ -0.76
SSB-203ENST00000413002 MC5RP33032 325 aa10.33□□□□□ -0.76
SSB-203ENST00000413002 RPS16P62249 146 aaKnown RBP10.33□□□□□ -0.76
SSB-203ENST00000413002 PLGLAQ15195 96 aa10.33□□□□□ -0.76
SSB-203ENST00000413002 UBE2NLQ5JXB2 153 aa10.33□□□□□ -0.76
SSB-203ENST00000413002 LIN54Q6MZP7 749 aa10.33□□□□□ -0.76
SSB-203ENST00000413002 CNIH2Q6PI25 160 aa10.33□□□□□ -0.76
SSB-203ENST00000413002 ANKRD13BQ86YJ7 626 aa10.33□□□□□ -0.76
SSB-203ENST00000413002 BEST4Q8NFU0 473 aa10.33□□□□□ -0.76
SSB-203ENST00000413002 NPBQ8NG41 125 aa10.33□□□□□ -0.76
SSB-203ENST00000413002 S100A16Q96FQ6 103 aaKnown RBP10.33□□□□□ -0.76
SSB-203ENST00000413002 PARP11Q9NR21 331 aa10.33□□□□□ -0.76
SSB-203ENST00000413002 SLC35D1Q9NTN3 355 aa10.33□□□□□ -0.76
SSB-203ENST00000413002 KIAA1456Q9P272 454 aa10.33□□□□□ -0.76
SSB-203ENST00000413002 TSSC4Q9Y5U2 329 aaPredicted RBP10.33□□□□□ -0.76
SSB-203ENST00000413002 A0A0A6YYH2 397 aa10.32□□□□□ -0.76
SSB-203ENST00000413002 IGHV7-81A0A0B4J1V7 117 aa10.32□□□□□ -0.76
SSB-203ENST00000413002 IGKV1D-13A0A0B4J2D9 117 aa10.32□□□□□ -0.76
SSB-203ENST00000413002 A6NJ64 397 aa10.32□□□□□ -0.76
SSB-203ENST00000413002 G3V318 75 aa10.32□□□□□ -0.76
SSB-203ENST00000413002 RRHO14718 337 aa10.32□□□□□ -0.76
SSB-203ENST00000413002 ATP6V0E1O15342 81 aa10.32□□□□□ -0.76
SSB-203ENST00000413002 KCNAB3O43448 404 aa10.32□□□□□ -0.76
SSB-203ENST00000413002 XRCC3O43542 346 aa10.32□□□□□ -0.76
SSB-203ENST00000413002 GABARAPO95166 117 aa10.32□□□□□ -0.76
SSB-203ENST00000413002 NDUFA3O95167 84 aa10.32□□□□□ -0.76
SSB-203ENST00000413002 OPN1MWP04001 364 aa10.32□□□□□ -0.76
SSB-203ENST00000413002 RPLP1P05386 114 aaKnown RBP10.32□□□□□ -0.76
SSB-203ENST00000413002 OPN1MW2P0DN77 364 aa10.32□□□□□ -0.76
SSB-203ENST00000413002 OPN1MW3P0DN78 364 aa10.32□□□□□ -0.76
SSB-203ENST00000413002 IGKV1-13P0DP09 117 aa10.32□□□□□ -0.76
SSB-203ENST00000413002 PF4V1P10720 104 aa10.32□□□□□ -0.76
SSB-203ENST00000413002 ALDH3B2P48448 385 aa10.32□□□□□ -0.76
SSB-203ENST00000413002 TAS2R20P59543 309 aa10.32□□□□□ -0.76
SSB-203ENST00000413002 SLC35B1P78383 322 aa10.32□□□□□ -0.76
SSB-203ENST00000413002 NDPQ00604 133 aa10.32□□□□□ -0.76
SSB-203ENST00000413002 DEFA6Q01524 100 aa10.32□□□□□ -0.76
SSB-203ENST00000413002 PSG5Q15238 335 aa10.32□□□□□ -0.76
SSB-203ENST00000413002 TMEM69Q5SWH9 247 aa10.32□□□□□ -0.76
SSB-203ENST00000413002 GPR141Q7Z602 305 aa10.32□□□□□ -0.76
SSB-203ENST00000413002 HOGA1Q86XE5 327 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms