RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 CT45A6P0DMU7 189 aa11.39□□□□□ -0.59
NIF3L1-205ENST00000409588 CT45A5P0DMU8 189 aa11.39□□□□□ -0.59
NIF3L1-205ENST00000409588 CT45A7P0DMV0 189 aa11.39□□□□□ -0.59
NIF3L1-205ENST00000409588 RAB3BP20337 219 aa11.39□□□□□ -0.59
NIF3L1-205ENST00000409588 PPIFP30405 207 aaKnown RBP11.39□□□□□ -0.59
NIF3L1-205ENST00000409588 FGF9P31371 208 aaPredicted RBP11.39□□□□□ -0.59
NIF3L1-205ENST00000409588 SSX1Q16384 188 aa11.39□□□□□ -0.59
NIF3L1-205ENST00000409588 UBE2UQ5VVX9 321 aa11.39□□□□□ -0.59
NIF3L1-205ENST00000409588 ETV3LQ6ZN32 361 aa11.39□□□□□ -0.59
NIF3L1-205ENST00000409588 TPRA1Q86W33 373 aa11.39□□□□□ -0.59
NIF3L1-205ENST00000409588 HSPB9Q9BQS6 159 aa11.39□□□□□ -0.59
NIF3L1-205ENST00000409588 RNF150Q9ULK6 438 aa11.39□□□□□ -0.59
NIF3L1-205ENST00000409588 WASHC3Q9Y3C0 194 aa11.39□□□□□ -0.59
NIF3L1-205ENST00000409588 TMEM272A0A1B0GTI8 110 aa11.38□□□□□ -0.59
NIF3L1-205ENST00000409588 RAMP3O60896 148 aa11.38□□□□□ -0.59
NIF3L1-205ENST00000409588 ATP6V1G2O95670 118 aa11.38□□□□□ -0.59
NIF3L1-205ENST00000409588 IGLV1-40P01703 118 aa11.38□□□□□ -0.59
NIF3L1-205ENST00000409588 SCTP09683 121 aa11.38□□□□□ -0.59
NIF3L1-205ENST00000409588 CLDN12P56749 244 aa11.38□□□□□ -0.59
NIF3L1-205ENST00000409588 PLAC9Q5JTB6 97 aa11.38□□□□□ -0.59
NIF3L1-205ENST00000409588 OR5M8Q8NGP6 311 aa11.38□□□□□ -0.59
NIF3L1-205ENST00000409588 OR10R2Q8NGX6 335 aa11.38□□□□□ -0.59
NIF3L1-205ENST00000409588 C4orf3Q8WVX3 66 aa11.38□□□□□ -0.59
NIF3L1-205ENST00000409588 KCNK15Q9H427 330 aa11.38□□□□□ -0.59
NIF3L1-205ENST00000409588 IGHV7-81A0A0B4J1V7 117 aa11.37□□□□□ -0.59
NIF3L1-205ENST00000409588 TRAV41A0A0B4J266 112 aa11.37□□□□□ -0.59
NIF3L1-205ENST00000409588 H0YJW9 148 aa11.37□□□□□ -0.59
NIF3L1-205ENST00000409588 H7C2Y5 167 aa11.37□□□□□ -0.59
NIF3L1-205ENST00000409588 RRHO14718 337 aa11.37□□□□□ -0.59
NIF3L1-205ENST00000409588 SCGNO76038 276 aa11.37□□□□□ -0.59
NIF3L1-205ENST00000409588 PRB2P02812 416 aaPredicted RBP11.37□□□□□ -0.59
NIF3L1-205ENST00000409588 SLC2A2P11168 524 aaPredicted RBP11.37□□□□□ -0.59
NIF3L1-205ENST00000409588 CD40LGP29965 261 aa11.37□□□□□ -0.59
NIF3L1-205ENST00000409588 CRIP2P52943 208 aaPredicted RBP11.37□□□□□ -0.59
NIF3L1-205ENST00000409588 RUNX1Q01196 453 aa11.37□□□□□ -0.59
NIF3L1-205ENST00000409588 HES5Q5TA89 166 aa11.37□□□□□ -0.59
NIF3L1-205ENST00000409588 PYHIN1Q6K0P9 492 aa11.37□□□□□ -0.59
NIF3L1-205ENST00000409588 ZNF562Q6V9R5 426 aa11.37□□□□□ -0.59
NIF3L1-205ENST00000409588 Q6ZS49 121 aa11.37□□□□□ -0.59
NIF3L1-205ENST00000409588 LCNL1Q6ZST4 164 aa11.37□□□□□ -0.59
NIF3L1-205ENST00000409588 C5orf24Q7Z6I8 188 aa11.37□□□□□ -0.59
NIF3L1-205ENST00000409588 MINDY2Q8NBR6 621 aa11.37□□□□□ -0.59
NIF3L1-205ENST00000409588 OR10J5Q8NHC4 309 aa11.37□□□□□ -0.59
NIF3L1-205ENST00000409588 MYOZ3Q8TDC0 251 aa11.37□□□□□ -0.59
NIF3L1-205ENST00000409588 RAX2Q96IS3 184 aa11.37□□□□□ -0.59
NIF3L1-205ENST00000409588 RITA1Q96K30 269 aa11.37□□□□□ -0.59
NIF3L1-205ENST00000409588 TSNAXQ99598 290 aaKnown RBP11.37□□□□□ -0.59
NIF3L1-205ENST00000409588 VSIG4Q9Y279 399 aa11.37□□□□□ -0.59
NIF3L1-205ENST00000409588 RAB27BO00194 218 aa11.36□□□□□ -0.59
NIF3L1-205ENST00000409588 FABP7O15540 132 aa11.36□□□□□ -0.59
NIF3L1-205ENST00000409588 SPDEFO95238 335 aa11.36□□□□□ -0.59
NIF3L1-205ENST00000409588 TFAP2AP05549 437 aa11.36□□□□□ -0.59
NIF3L1-205ENST00000409588 TALDO1P37837 337 aa11.36□□□□□ -0.59
NIF3L1-205ENST00000409588 LGALS7P47929 136 aa11.36□□□□□ -0.59
NIF3L1-205ENST00000409588 RAB9AP51151 201 aa11.36□□□□□ -0.59
NIF3L1-205ENST00000409588 INSL3P51460 131 aa11.36□□□□□ -0.59
NIF3L1-205ENST00000409588 AKIRIN2Q53H80 203 aa11.36□□□□□ -0.59
NIF3L1-205ENST00000409588 RPL39P5Q59GN2 51 aa11.36□□□□□ -0.59
NIF3L1-205ENST00000409588 FAM131AQ6UXB0 335 aa11.36□□□□□ -0.59
NIF3L1-205ENST00000409588 PDPNQ86YL7 162 aa11.36□□□□□ -0.59
NIF3L1-205ENST00000409588 SPARTQ8N0X7 666 aa11.36□□□□□ -0.59
NIF3L1-205ENST00000409588 ABHD14BQ96IU4 210 aa11.36□□□□□ -0.59
NIF3L1-205ENST00000409588 HDHD3Q9BSH5 251 aaPredicted RBP11.36□□□□□ -0.59
NIF3L1-205ENST00000409588 RDH8Q9NYR8 311 aa11.36□□□□□ -0.59
NIF3L1-205ENST00000409588 KCNK7Q9Y2U2 307 aa11.36□□□□□ -0.59
NIF3L1-205ENST00000409588 TRBV6-7A0A0A0MS04 114 aa11.35□□□□□ -0.59
NIF3L1-205ENST00000409588 NOTOA8MTQ0 251 aa11.35□□□□□ -0.59
NIF3L1-205ENST00000409588 ARPC1BO15143 372 aaKnown RBP11.35□□□□□ -0.59
NIF3L1-205ENST00000409588 TMEM127O75204 238 aa11.35□□□□□ -0.59
NIF3L1-205ENST00000409588 APOA2P02652 100 aa11.35□□□□□ -0.59
NIF3L1-205ENST00000409588 CTXN2P0C2S0 81 aa11.35□□□□□ -0.59
NIF3L1-205ENST00000409588 HIST1H1DP16402 221 aaKnown RBP11.35□□□□□ -0.59
NIF3L1-205ENST00000409588 PITPNAQ00169 270 aa11.35□□□□□ -0.59
NIF3L1-205ENST00000409588 PLGLAQ15195 96 aa11.35□□□□□ -0.59
NIF3L1-205ENST00000409588 C9orf66Q5T8R8 295 aa11.35□□□□□ -0.59
NIF3L1-205ENST00000409588 ZNF491Q8N8L2 437 aa11.35□□□□□ -0.59
NIF3L1-205ENST00000409588 FLYWCH2Q96CP2 140 aaKnown RBP11.35□□□□□ -0.59
NIF3L1-205ENST00000409588 CYYR1Q96J86 154 aa11.35□□□□□ -0.59
NIF3L1-205ENST00000409588 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.35□□□□□ -0.59
NIF3L1-205ENST00000409588 PARP11Q9NR21 331 aa11.35□□□□□ -0.59
NIF3L1-205ENST00000409588 OR1A1Q9P1Q5 309 aa11.35□□□□□ -0.59
NIF3L1-205ENST00000409588 STUB1Q9UNE7 303 aa11.35□□□□□ -0.59
NIF3L1-205ENST00000409588 SSR3Q9UNL2 185 aa11.35□□□□□ -0.59
NIF3L1-205ENST00000409588 NUBP2Q9Y5Y2 271 aa11.35□□□□□ -0.59
NIF3L1-205ENST00000409588 ATP6V0E1O15342 81 aa11.34□□□□□ -0.59
NIF3L1-205ENST00000409588 PROP1O75360 226 aa11.34□□□□□ -0.59
NIF3L1-205ENST00000409588 FCGR3AP08637 254 aa11.34□□□□□ -0.59
NIF3L1-205ENST00000409588 OR8U8P0C7N1 319 aa11.34□□□□□ -0.59
NIF3L1-205ENST00000409588 RRASP10301 218 aa11.34□□□□□ -0.59
NIF3L1-205ENST00000409588 CNTFRP26992 372 aa11.34□□□□□ -0.59
NIF3L1-205ENST00000409588 SCAND1P57086 179 aa11.34□□□□□ -0.59
NIF3L1-205ENST00000409588 KRTAP10-11P60412 298 aa11.34□□□□□ -0.59
NIF3L1-205ENST00000409588 CX3CL1P78423 397 aa11.34□□□□□ -0.59
NIF3L1-205ENST00000409588 DGCR2P98153 550 aa11.34□□□□□ -0.59
NIF3L1-205ENST00000409588 FHL3Q13643 280 aa11.34□□□□□ -0.59
NIF3L1-205ENST00000409588 DEFB121Q5J5C9 76 aa11.34□□□□□ -0.59
NIF3L1-205ENST00000409588 C22orf42Q6IC83 251 aa11.34□□□□□ -0.59
NIF3L1-205ENST00000409588 C18orf65Q6ZTR6 163 aa11.34□□□□□ -0.59
NIF3L1-205ENST00000409588 OR11H1Q8NG94 326 aa11.34□□□□□ -0.59
NIF3L1-205ENST00000409588 TMEM68Q96MH6 324 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms