RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 ZNF726P1Q15940 193 aa14.06□□□□□ -0.16
NUP50-203ENST00000407019 TMEM41BQ5BJD5 291 aa14.06□□□□□ -0.16
NUP50-203ENST00000407019 OR8G2PQ6IF36 304 aa14.06□□□□□ -0.16
NUP50-203ENST00000407019 TAF15Q92804 592 aaKnown RBP eCLIP14.06□□□□□ -0.16
NUP50-203ENST00000407019 URB1O60287 2271 aaKnown RBP14.06□□□□□ -0.16
NUP50-203ENST00000407019 CACNA1GO43497 2377 aa14.06□□□□□ -0.16
NUP50-203ENST00000407019 C15orf65H3BRN8 121 aa14.06□□□□□ -0.16
NUP50-203ENST00000407019 RAB29O14966 203 aa14.06□□□□□ -0.16
NUP50-203ENST00000407019 ST8SIA5O15466 376 aa14.06□□□□□ -0.16
NUP50-203ENST00000407019 ADH4P08319 380 aa14.06□□□□□ -0.16
NUP50-203ENST00000407019 EGR1P18146 543 aa14.06□□□□□ -0.16
NUP50-203ENST00000407019 HTD2P86397 168 aa14.06□□□□□ -0.16
NUP50-203ENST00000407019 Q3ZCU0 254 aa14.06□□□□□ -0.16
NUP50-203ENST00000407019 LCN15Q6UWW0 184 aa14.06□□□□□ -0.16
NUP50-203ENST00000407019 OR10G4Q8NGN3 311 aa14.06□□□□□ -0.16
NUP50-203ENST00000407019 RFESDQ8TAC1 157 aa14.06□□□□□ -0.16
NUP50-203ENST00000407019 PINX1Q96BK5 328 aaKnown RBP14.06□□□□□ -0.16
NUP50-203ENST00000407019 RCC1LQ96I51 464 aaKnown RBP14.06□□□□□ -0.16
NUP50-203ENST00000407019 HSD17B10Q99714 261 aaKnown RBP14.06□□□□□ -0.16
NUP50-203ENST00000407019 PSG11Q9UQ72 335 aa14.06□□□□□ -0.16
NUP50-203ENST00000407019 LAMP3Q9UQV4 416 aa14.06□□□□□ -0.16
NUP50-203ENST00000407019 MAS1LP35410 378 aa14.05□□□□□ -0.16
NUP50-203ENST00000407019 TAGLN2P37802 199 aaKnown RBP14.05□□□□□ -0.16
NUP50-203ENST00000407019 ZNF83P51522 516 aa14.05□□□□□ -0.16
NUP50-203ENST00000407019 H2BFWTQ7Z2G1 175 aa14.05□□□□□ -0.16
NUP50-203ENST00000407019 MALSU1Q96EH3 234 aa14.05□□□□□ -0.16
NUP50-203ENST00000407019 TVP23CQ96ET8 276 aa14.05□□□□□ -0.16
NUP50-203ENST00000407019 NIPSNAP3BQ9BS92 247 aa14.05□□□□□ -0.16
NUP50-203ENST00000407019 ZNF665Q9H7R5 613 aa14.05□□□□□ -0.16
NUP50-203ENST00000407019 CISD1Q9NZ45 108 aaKnown RBP14.05□□□□□ -0.16
NUP50-203ENST00000407019 CLN8Q9UBY8 286 aa14.05□□□□□ -0.16
NUP50-203ENST00000407019 DUSP13Q9UII6 198 aa14.05□□□□□ -0.16
NUP50-203ENST00000407019 WASF3Q9UPY6 502 aa14.05□□□□□ -0.16
NUP50-203ENST00000407019 KIAA2026Q5HYC2 2103 aa14.05□□□□□ -0.16
NUP50-203ENST00000407019 DEFB108AA8MXU0 73 aa14.05□□□□□ -0.16
NUP50-203ENST00000407019 SRRM5B3KS81 715 aa14.05□□□□□ -0.16
NUP50-203ENST00000407019 ZNF737O75373 536 aa14.05□□□□□ -0.16
NUP50-203ENST00000407019 BCL2P10415 239 aa14.05□□□□□ -0.16
NUP50-203ENST00000407019 SNRPEP62304 92 aaKnown RBP14.05□□□□□ -0.16
NUP50-203ENST00000407019 DLK1P80370 383 aa14.05□□□□□ -0.16
NUP50-203ENST00000407019 MSMPQ1L6U9 139 aa14.05□□□□□ -0.16
NUP50-203ENST00000407019 SSX7Q7RTT5 188 aa14.05□□□□□ -0.16
NUP50-203ENST00000407019 FAM90A1Q86YD7 464 aa14.05□□□□□ -0.16
NUP50-203ENST00000407019 DCTN5Q9BTE1 182 aa14.05□□□□□ -0.16
NUP50-203ENST00000407019 TIMM9Q9Y5J7 89 aa14.05□□□□□ -0.16
NUP50-203ENST00000407019 A0A087WWC5 75 aa14.04□□□□□ -0.16
NUP50-203ENST00000407019 ZNF98A6NK75 572 aa14.04□□□□□ -0.16
NUP50-203ENST00000407019 ZFP92A6NM28 416 aa14.04□□□□□ -0.16
NUP50-203ENST00000407019 LINC00473A8K010 186 aa14.04□□□□□ -0.16
NUP50-203ENST00000407019 M0R1B8 84 aa14.04□□□□□ -0.16
NUP50-203ENST00000407019 S100A6P06703 90 aa14.04□□□□□ -0.16
NUP50-203ENST00000407019 ELLP55199 621 aaPredicted RBP14.04□□□□□ -0.16
NUP50-203ENST00000407019 ATP6V1FQ16864 119 aa14.04□□□□□ -0.16
NUP50-203ENST00000407019 ALKBH2Q6NS38 261 aa14.04□□□□□ -0.16
NUP50-203ENST00000407019 SLC35E3Q7Z769 313 aa14.04□□□□□ -0.16
NUP50-203ENST00000407019 LRP11Q86VZ4 500 aa14.04□□□□□ -0.16
NUP50-203ENST00000407019 DTD1Q8TEA8 209 aa14.04□□□□□ -0.16
NUP50-203ENST00000407019 MUCL1Q96DR8 90 aa14.04□□□□□ -0.16
NUP50-203ENST00000407019 YPEL4Q96NS1 127 aa14.04□□□□□ -0.16
NUP50-203ENST00000407019 GTF3C1Q12789 2109 aa14.04□□□□□ -0.16
NUP50-203ENST00000407019 IGKV1D-17A0A075B6S4 117 aa14.03□□□□□ -0.16
NUP50-203ENST00000407019 FGF8P55075 233 aaPredicted RBP14.03□□□□□ -0.16
NUP50-203ENST00000407019 LTC4SQ16873 150 aa14.03□□□□□ -0.16
NUP50-203ENST00000407019 EIF2S3LQ2VIR3 472 aaKnown RBP14.03□□□□□ -0.16
NUP50-203ENST00000407019 TIMM23BQ5SRD1 257 aa14.03□□□□□ -0.16
NUP50-203ENST00000407019 IGFL3Q6UXB1 125 aa14.03□□□□□ -0.16
NUP50-203ENST00000407019 PPP1R35Q8TAP8 253 aa14.03□□□□□ -0.16
NUP50-203ENST00000407019 EDARADDQ8WWZ3 215 aa14.03□□□□□ -0.16
NUP50-203ENST00000407019 S100PBPQ96BU1 408 aa14.03□□□□□ -0.16
NUP50-203ENST00000407019 CIB3Q96Q77 187 aaPredicted RBP14.03□□□□□ -0.16
NUP50-203ENST00000407019 TMEM147Q9BVK8 224 aa14.03□□□□□ -0.16
NUP50-203ENST00000407019 MAP1LC3B2A6NCE7 125 aa14.03□□□□□ -0.16
NUP50-203ENST00000407019 ZG16O60844 167 aa14.03□□□□□ -0.16
NUP50-203ENST00000407019 CFHR2P36980 270 aa14.03□□□□□ -0.16
NUP50-203ENST00000407019 ADAM5Q6NVV9 412 aa14.03□□□□□ -0.16
NUP50-203ENST00000407019 FAM180AQ6UWF9 173 aa14.03□□□□□ -0.16
NUP50-203ENST00000407019 AGMATQ9BSE5 352 aa14.03□□□□□ -0.16
NUP50-203ENST00000407019 MRPL37Q9BZE1 423 aaKnown RBP14.03□□□□□ -0.16
NUP50-203ENST00000407019 MAP1LC3BQ9GZQ8 125 aa14.03□□□□□ -0.16
NUP50-203ENST00000407019 FRYQ5TBA9 3013 aa14.03□□□□□ -0.16
NUP50-203ENST00000407019 C5orf52A6NGY3 159 aa14.02□□□□□ -0.16
NUP50-203ENST00000407019 MGST3O14880 152 aa14.02□□□□□ -0.16
NUP50-203ENST00000407019 RBMXL2O75526 392 aaKnown RBP14.02□□□□□ -0.16
NUP50-203ENST00000407019 IGHV3-13P01766 116 aa14.02□□□□□ -0.16
NUP50-203ENST00000407019 GZMHP20718 246 aa14.02□□□□□ -0.16
NUP50-203ENST00000407019 RAB11AP62491 216 aa14.02□□□□□ -0.16
NUP50-203ENST00000407019 ZNF474Q6S9Z5 364 aaPredicted RBP14.02□□□□□ -0.16
NUP50-203ENST00000407019 CENPVQ7Z7K6 275 aaPredicted RBP14.02□□□□□ -0.16
NUP50-203ENST00000407019 ZDHHC16Q969W1 377 aa14.02□□□□□ -0.16
NUP50-203ENST00000407019 SNX22Q96L94 193 aa14.02□□□□□ -0.16
NUP50-203ENST00000407019 C12orf57Q99622 126 aa14.02□□□□□ -0.16
NUP50-203ENST00000407019 SEBOXQ9HB31 216 aaPredicted RBP14.02□□□□□ -0.16
NUP50-203ENST00000407019 JPT1Q9UK76 154 aa14.02□□□□□ -0.16
NUP50-203ENST00000407019 MARCH11A6NNE9 402 aa14.02□□□□□ -0.17
NUP50-203ENST00000407019 IFNA1P01562 189 aa14.02□□□□□ -0.17
NUP50-203ENST00000407019 CRYAAP02489 173 aa14.02□□□□□ -0.17
NUP50-203ENST00000407019 GPR12P47775 334 aa14.02□□□□□ -0.17
NUP50-203ENST00000407019 KLF3P57682 345 aaPredicted RBP14.02□□□□□ -0.17
NUP50-203ENST00000407019 LINC00205P59089 165 aa14.02□□□□□ -0.17
NUP50-203ENST00000407019 HEPN1Q6WQI6 88 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms