RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 KLF9Q13886 244 aaPredicted RBP13.07□□□□□ -0.32
LSS-202ENST00000397728 FAM219AQ8IW50 185 aa13.07□□□□□ -0.32
LSS-202ENST00000397728 POC1AQ8NBT0 407 aa13.07□□□□□ -0.32
LSS-202ENST00000397728 ELF5Q9UKW6 265 aaPredicted RBP13.07□□□□□ -0.32
LSS-202ENST00000397728 LRP11Q86VZ4 500 aa13.07□□□□□ -0.32
LSS-202ENST00000397728 OR8I2Q8N0Y5 310 aa13.07□□□□□ -0.32
LSS-202ENST00000397728 LILRB1Q8NHL6 650 aaPredicted RBP13.07□□□□□ -0.32
LSS-202ENST00000397728 RHOFQ9HBH0 211 aa13.07□□□□□ -0.32
LSS-202ENST00000397728 A0A1B0GTI1 187 aa13.06□□□□□ -0.32
LSS-202ENST00000397728 EXOSC2Q13868 293 aaKnown RBP13.06□□□□□ -0.32
LSS-202ENST00000397728 WDR31Q8NA23 367 aa13.06□□□□□ -0.32
LSS-202ENST00000397728 RXFP4Q8TDU9 374 aa13.06□□□□□ -0.32
LSS-202ENST00000397728 PHF3Q92576 2039 aaKnown RBP13.06□□□□□ -0.32
LSS-202ENST00000397728 ZNF727A8MUV8 499 aa13.06□□□□□ -0.32
LSS-202ENST00000397728 BCL2L11O43521 198 aa13.06□□□□□ -0.32
LSS-202ENST00000397728 FBP1P09467 338 aa13.06□□□□□ -0.32
LSS-202ENST00000397728 H3F3AP84243 136 aa13.06□□□□□ -0.32
LSS-202ENST00000397728 HMGN3Q15651 99 aa13.06□□□□□ -0.32
LSS-202ENST00000397728 CLEC9AQ6UXN8 241 aa13.06□□□□□ -0.32
LSS-202ENST00000397728 ZNF66Q6ZN08 573 aa13.06□□□□□ -0.32
LSS-202ENST00000397728 MMD2Q8IY49 270 aa13.06□□□□□ -0.32
LSS-202ENST00000397728 AUP1Q9Y679 476 aa13.06□□□□□ -0.32
LSS-202ENST00000397728 GTF3C1Q12789 2109 aa13.06□□□□□ -0.32
LSS-202ENST00000397728 TMEM14DPA8MWL7 114 aa13.06□□□□□ -0.32
LSS-202ENST00000397728 S100A4P26447 101 aaKnown RBP13.06□□□□□ -0.32
LSS-202ENST00000397728 OR5I1Q13606 314 aa13.06□□□□□ -0.32
LSS-202ENST00000397728 C1QTNF12Q5T7M4 302 aa13.06□□□□□ -0.32
LSS-202ENST00000397728 HCP5Q6MZN7 132 aa13.06□□□□□ -0.32
LSS-202ENST00000397728 RPRMLQ8N4K4 120 aa13.06□□□□□ -0.32
LSS-202ENST00000397728 SSMEM1Q8WWF3 244 aa13.06□□□□□ -0.32
LSS-202ENST00000397728 J3QKU1 62 aa13.06□□□□□ -0.32
LSS-202ENST00000397728 LOXL3P58215 753 aa13.06□□□□□ -0.32
LSS-202ENST00000397728 ZNF79Q15937 498 aa13.06□□□□□ -0.32
LSS-202ENST00000397728 PRSS54Q6PEW0 395 aa13.06□□□□□ -0.32
LSS-202ENST00000397728 ST8SIA2Q92186 375 aa13.06□□□□□ -0.32
LSS-202ENST00000397728 RGP1Q92546 391 aaPredicted RBP13.06□□□□□ -0.32
LSS-202ENST00000397728 TVP23CQ96ET8 276 aa13.06□□□□□ -0.32
LSS-202ENST00000397728 CLEC5AQ9NY25 188 aa13.06□□□□□ -0.32
LSS-202ENST00000397728 RABAC1Q9UI14 185 aa13.06□□□□□ -0.32
LSS-202ENST00000397728 WT1P19544 449 aaPredicted RBP13.05□□□□□ -0.32
LSS-202ENST00000397728 VAX1Q5SQQ9 334 aa13.05□□□□□ -0.32
LSS-202ENST00000397728 ZNF645Q8N7E2 425 aa13.05□□□□□ -0.32
LSS-202ENST00000397728 MT-ND4LP03901 98 aa13.05□□□□□ -0.32
LSS-202ENST00000397728 TMEM50BP56557 158 aa13.05□□□□□ -0.32
LSS-202ENST00000397728 RPL8P62917 257 aaKnown RBP13.05□□□□□ -0.32
LSS-202ENST00000397728 ZNF474Q6S9Z5 364 aaPredicted RBP13.05□□□□□ -0.32
LSS-202ENST00000397728 ZFP82Q8N141 532 aa13.05□□□□□ -0.32
LSS-202ENST00000397728 TMEM186Q96B77 213 aa13.05□□□□□ -0.32
LSS-202ENST00000397728 DCTN5Q9BTE1 182 aa13.05□□□□□ -0.32
LSS-202ENST00000397728 SH2D2AQ9NP31 389 aa13.05□□□□□ -0.32
LSS-202ENST00000397728 CDS2O95674 445 aa13.05□□□□□ -0.32
LSS-202ENST00000397728 RPS10P46783 165 aaKnown RBP13.05□□□□□ -0.32
LSS-202ENST00000397728 SLC35E4Q6ICL7 350 aa13.05□□□□□ -0.32
LSS-202ENST00000397728 SLC25A15Q9Y619 301 aa13.05□□□□□ -0.32
LSS-202ENST00000397728 C2orf16Q68DN1 1984 aa13.05□□□□□ -0.32
LSS-202ENST00000397728 TAGLN2P37802 199 aaKnown RBP13.05□□□□□ -0.32
LSS-202ENST00000397728 DEFA6Q01524 100 aa13.05□□□□□ -0.32
LSS-202ENST00000397728 VSIG4Q9Y279 399 aa13.05□□□□□ -0.32
LSS-202ENST00000397728 CNN1P51911 297 aaKnown RBP13.04□□□□□ -0.32
LSS-202ENST00000397728 WFDC3Q8IUB2 231 aa13.04□□□□□ -0.32
LSS-202ENST00000397728 FBXL17Q9UF56 701 aa13.04□□□□□ -0.32
LSS-202ENST00000397728 A0A1B0GU03 582 aa13.04□□□□□ -0.32
LSS-202ENST00000397728 WDFY1Q8IWB7 410 aa13.04□□□□□ -0.32
LSS-202ENST00000397728 BSCL2Q96G97 398 aaPredicted RBP13.04□□□□□ -0.32
LSS-202ENST00000397728 TMEM231Q9H6L2 316 aa13.04□□□□□ -0.32
LSS-202ENST00000397728 DPM3Q9P2X0 92 aa13.04□□□□□ -0.32
LSS-202ENST00000397728 WNT5AP41221 380 aa13.04□□□□□ -0.32
LSS-202ENST00000397728 PRB3Q04118 309 aaPredicted RBP13.04□□□□□ -0.32
LSS-202ENST00000397728 ATP6V1FQ16864 119 aa13.04□□□□□ -0.32
LSS-202ENST00000397728 CENPVQ7Z7K6 275 aaPredicted RBP13.04□□□□□ -0.32
LSS-202ENST00000397728 OR1L4Q8NGR5 311 aa13.04□□□□□ -0.32
LSS-202ENST00000397728 UMAD1C9J7I0 102 aa13.03□□□□□ -0.32
LSS-202ENST00000397728 PLA2G10O15496 165 aa13.03□□□□□ -0.32
LSS-202ENST00000397728 ZNF418Q8TF45 676 aaPredicted RBP13.03□□□□□ -0.32
LSS-202ENST00000397728 IL36RNQ9UBH0 155 aa13.03□□□□□ -0.32
LSS-202ENST00000397728 SLC45A2Q9UMX9 530 aa13.03□□□□□ -0.32
LSS-202ENST00000397728 PAQR4Q8N4S7 273 aaPredicted RBP13.03□□□□□ -0.32
LSS-202ENST00000397728 CRIM1Q9NZV1 1036 aa13.03□□□□□ -0.32
LSS-202ENST00000397728 MED19A0JLT2 244 aaPredicted RBP13.03□□□□□ -0.32
LSS-202ENST00000397728 IGHV1-46P01743 117 aa13.03□□□□□ -0.32
LSS-202ENST00000397728 GAMTQ14353 236 aa13.03□□□□□ -0.32
LSS-202ENST00000397728 ZNF672Q499Z4 452 aaPredicted RBP13.03□□□□□ -0.32
LSS-202ENST00000397728 SP5Q6BEB4 398 aaPredicted RBP13.03□□□□□ -0.32
LSS-202ENST00000397728 MS4A10Q96PG2 267 aa13.03□□□□□ -0.32
LSS-202ENST00000397728 PPP1R3EQ9H7J1 279 aa13.03□□□□□ -0.32
LSS-202ENST00000397728 C19orf12Q9NSK7 152 aa13.03□□□□□ -0.32
LSS-202ENST00000397728 ZNF319Q9P2F9 582 aa13.03□□□□□ -0.32
LSS-202ENST00000397728 C12orf77C9JDV5 145 aa13.03□□□□□ -0.32
LSS-202ENST00000397728 HPXP02790 462 aa13.03□□□□□ -0.32
LSS-202ENST00000397728 SMIM7Q9BQ49 75 aa13.03□□□□□ -0.32
LSS-202ENST00000397728 SLC25A5P05141 298 aaKnown RBP13.02□□□□□ -0.32
LSS-202ENST00000397728 DYNLT3P51808 116 aa13.02□□□□□ -0.32
LSS-202ENST00000397728 OR10S1Q8NGN2 331 aa13.02□□□□□ -0.32
LSS-202ENST00000397728 RCC2Q9P258 522 aaKnown RBP13.02□□□□□ -0.32
LSS-202ENST00000397728 LTBP2Q14767 1821 aa13.02□□□□□ -0.32
LSS-202ENST00000397728 BTNL8Q6UX41 500 aa13.02□□□□□ -0.32
LSS-202ENST00000397728 MYO18BQ8IUG5 2567 aa13.02□□□□□ -0.33
LSS-202ENST00000397728 SPP1P10451 314 aa13.02□□□□□ -0.33
LSS-202ENST00000397728 CCL3L1P16619 93 aa13.02□□□□□ -0.33
LSS-202ENST00000397728 ASPHD2Q6ICH7 369 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 366.2 ms