RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 DUX4L4P0CJ87 422 aa15.92■□□□□ 0.14
LMNB1-202ENST00000395354 DUX4L5P0CJ88 424 aa15.92■□□□□ 0.14
LMNB1-202ENST00000395354 DUX4L6P0CJ89 424 aa15.92■□□□□ 0.14
LMNB1-202ENST00000395354 DUX4L7P0CJ90 424 aa15.92■□□□□ 0.14
LMNB1-202ENST00000395354 TMEM33P57088 247 aa15.92■□□□□ 0.14
LMNB1-202ENST00000395354 LOXL3P58215 753 aa15.92■□□□□ 0.14
LMNB1-202ENST00000395354 CATR1Q13166 79 aa15.92■□□□□ 0.14
LMNB1-202ENST00000395354 C17orf58Q2M2W7 97 aa15.92■□□□□ 0.14
LMNB1-202ENST00000395354 THOC7Q6I9Y2 204 aaKnown RBP15.92■□□□□ 0.14
LMNB1-202ENST00000395354 DUX4L9Q6RFH8 374 aaPredicted RBP15.92■□□□□ 0.14
LMNB1-202ENST00000395354 ZNF66Q6ZN08 573 aa15.92■□□□□ 0.14
LMNB1-202ENST00000395354 LSM10Q969L4 123 aaKnown RBP15.92■□□□□ 0.14
LMNB1-202ENST00000395354 ARPC5LQ9BPX5 153 aa15.92■□□□□ 0.14
LMNB1-202ENST00000395354 AGMATQ9BSE5 352 aa15.92■□□□□ 0.14
LMNB1-202ENST00000395354 TAS2R3Q9NYW6 316 aa15.92■□□□□ 0.14
LMNB1-202ENST00000395354 GNG12Q9UBI6 72 aa15.92■□□□□ 0.14
LMNB1-202ENST00000395354 KAAG1Q9UBP8 84 aa15.92■□□□□ 0.14
LMNB1-202ENST00000395354 DUX4Q9UBX2 424 aa15.92■□□□□ 0.14
LMNB1-202ENST00000395354 TANC2Q9HCD6 1990 aa15.91■□□□□ 0.14
LMNB1-202ENST00000395354 hADV38S2A0JD32 116 aa15.91■□□□□ 0.14
LMNB1-202ENST00000395354 E5RGE8 158 aa15.91■□□□□ 0.14
LMNB1-202ENST00000395354 K7EPK0 472 aa15.91■□□□□ 0.14
LMNB1-202ENST00000395354 TMPRSS2O15393 492 aa15.91■□□□□ 0.14
LMNB1-202ENST00000395354 FAM71E2Q8N5Q1 922 aa15.91■□□□□ 0.14
LMNB1-202ENST00000395354 OR52M1Q8NGK5 317 aa15.91■□□□□ 0.14
LMNB1-202ENST00000395354 RRNAD1Q96FB5 475 aaKnown RBP15.91■□□□□ 0.14
LMNB1-202ENST00000395354 PLEKHA2Q9HB19 425 aa15.91■□□□□ 0.14
LMNB1-202ENST00000395354 SLC25A10Q9UBX3 287 aaPredicted RBP15.91■□□□□ 0.14
LMNB1-202ENST00000395354 LPAR3Q9UBY5 353 aa15.91■□□□□ 0.14
LMNB1-202ENST00000395354 GAB2Q9UQC2 676 aa15.91■□□□□ 0.14
LMNB1-202ENST00000395354 NSG2Q9Y328 171 aa15.91■□□□□ 0.14
LMNB1-202ENST00000395354 POMT1Q9Y6A1 747 aa15.91■□□□□ 0.14
LMNB1-202ENST00000395354 LINC00312Q9Y6C7 94 aa15.91■□□□□ 0.14
LMNB1-202ENST00000395354 CSMD2Q7Z408 3487 aa15.91■□□□□ 0.14
LMNB1-202ENST00000395354 IGHV3-43A0A0B4J1X8 118 aa15.9■□□□□ 0.14
LMNB1-202ENST00000395354 A0A1B0GU03 582 aa15.9■□□□□ 0.14
LMNB1-202ENST00000395354 PPIHO43447 177 aaKnown RBP15.9■□□□□ 0.14
LMNB1-202ENST00000395354 IGHV3-43DP0DP04 118 aa15.9■□□□□ 0.14
LMNB1-202ENST00000395354 PDLIM4P50479 330 aa15.9■□□□□ 0.14
LMNB1-202ENST00000395354 SLC7A5P1Q8MH63 180 aa15.9■□□□□ 0.14
LMNB1-202ENST00000395354 OR10A7Q8NGE5 316 aa15.9■□□□□ 0.14
LMNB1-202ENST00000395354 HSD17B10Q99714 261 aaKnown RBP15.9■□□□□ 0.14
LMNB1-202ENST00000395354 RNF150Q9ULK6 438 aa15.9■□□□□ 0.14
LMNB1-202ENST00000395354 LSM5Q9Y4Y9 91 aaKnown RBP15.9■□□□□ 0.14
LMNB1-202ENST00000395354 SETXQ7Z333 2677 aaKnown RBP15.89■□□□□ 0.13
LMNB1-202ENST00000395354 ADAM20O43506 726 aa15.89■□□□□ 0.13
LMNB1-202ENST00000395354 SCGB1D2O95969 90 aa15.89■□□□□ 0.13
LMNB1-202ENST00000395354 RAB7AP51149 207 aa15.89■□□□□ 0.13
LMNB1-202ENST00000395354 ZNF585BQ52M93 769 aa15.89■□□□□ 0.13
LMNB1-202ENST00000395354 CLLU1Q5K131 121 aa15.89■□□□□ 0.13
LMNB1-202ENST00000395354 CLEC2AQ6UVW9 174 aa15.89■□□□□ 0.13
LMNB1-202ENST00000395354 OR8H3Q8N146 312 aa15.89■□□□□ 0.13
LMNB1-202ENST00000395354 SCARB1Q8WTV0 552 aa15.89■□□□□ 0.13
LMNB1-202ENST00000395354 FAM168AQ92567 244 aa15.89■□□□□ 0.13
LMNB1-202ENST00000395354 GFOD1Q9NXC2 390 aa15.89■□□□□ 0.13
LMNB1-202ENST00000395354 PSG11Q9UQ72 335 aa15.89■□□□□ 0.13
LMNB1-202ENST00000395354 TAAR5O14804 337 aa15.88■□□□□ 0.13
LMNB1-202ENST00000395354 NDUFB3O43676 98 aa15.88■□□□□ 0.13
LMNB1-202ENST00000395354 HKR1P10072 659 aa15.88■□□□□ 0.13
LMNB1-202ENST00000395354 RAB14P61106 215 aa15.88■□□□□ 0.13
LMNB1-202ENST00000395354 LRRC10Q5BKY1 277 aa15.88■□□□□ 0.13
LMNB1-202ENST00000395354 KIAA2026Q5HYC2 2103 aa15.88■□□□□ 0.13
LMNB1-202ENST00000395354 FAM53AQ6NSI3 398 aaPredicted RBP15.88■□□□□ 0.13
LMNB1-202ENST00000395354 TCF23Q7RTU1 214 aa15.88■□□□□ 0.13
LMNB1-202ENST00000395354 FOXRED2Q8IWF2 684 aa15.88■□□□□ 0.13
LMNB1-202ENST00000395354 ST8SIA2Q92186 375 aa15.88■□□□□ 0.13
LMNB1-202ENST00000395354 RAB1CQ92928 201 aa15.88■□□□□ 0.13
LMNB1-202ENST00000395354 PHYHIPLQ96FC7 376 aa15.88■□□□□ 0.13
LMNB1-202ENST00000395354 C5orf30Q96GV9 206 aa15.88■□□□□ 0.13
LMNB1-202ENST00000395354 TIMD4Q96H15 378 aa15.88■□□□□ 0.13
LMNB1-202ENST00000395354 SDHAF2Q9NX18 166 aa15.88■□□□□ 0.13
LMNB1-202ENST00000395354 IDI2-AS1Q9NZ38 188 aa15.88■□□□□ 0.13
LMNB1-202ENST00000395354 MAP1AP78559 2803 aaPredicted RBP15.88■□□□□ 0.13
LMNB1-202ENST00000395354 ATG12O94817 140 aa15.87■□□□□ 0.13
LMNB1-202ENST00000395354 MMP9P14780 707 aa15.87■□□□□ 0.13
LMNB1-202ENST00000395354 ZNF16P17020 682 aaPredicted RBP15.87■□□□□ 0.13
LMNB1-202ENST00000395354 NDUFB7P17568 137 aa15.87■□□□□ 0.13
LMNB1-202ENST00000395354 RPL12P30050 165 aaKnown RBP15.87■□□□□ 0.13
LMNB1-202ENST00000395354 NKX2-1P43699 371 aaPredicted RBP15.87■□□□□ 0.13
LMNB1-202ENST00000395354 P2RY1P47900 373 aa15.87■□□□□ 0.13
LMNB1-202ENST00000395354 DSCR9P59020 149 aa15.87■□□□□ 0.13
LMNB1-202ENST00000395354 STOML3Q8TAV4 291 aa15.87■□□□□ 0.13
LMNB1-202ENST00000395354 GAL3ST2Q9H3Q3 398 aa15.87■□□□□ 0.13
LMNB1-202ENST00000395354 MSGN1A6NI15 193 aa15.87■□□□□ 0.13
LMNB1-202ENST00000395354 F5H0A9 414 aaPredicted RBP15.87■□□□□ 0.13
LMNB1-202ENST00000395354 ST8SIA5O15466 376 aa15.87■□□□□ 0.13
LMNB1-202ENST00000395354 PITX3O75364 302 aa15.87■□□□□ 0.13
LMNB1-202ENST00000395354 IGKV1-39P01597 117 aa15.87■□□□□ 0.13
LMNB1-202ENST00000395354 IGKV1D-39P04432 117 aa15.87■□□□□ 0.13
LMNB1-202ENST00000395354 GPR6P46095 362 aaPredicted RBP15.87■□□□□ 0.13
LMNB1-202ENST00000395354 GPR12P47775 334 aa15.87■□□□□ 0.13
LMNB1-202ENST00000395354 ID3Q02535 119 aa15.87■□□□□ 0.13
LMNB1-202ENST00000395354 LTC4SQ16873 150 aa15.87■□□□□ 0.13
LMNB1-202ENST00000395354 CLEC12BQ2HXU8 276 aa15.87■□□□□ 0.13
LMNB1-202ENST00000395354 AVPI1Q5T686 147 aa15.87■□□□□ 0.13
LMNB1-202ENST00000395354 GPR157Q5UAW9 335 aa15.87■□□□□ 0.13
LMNB1-202ENST00000395354 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.87■□□□□ 0.13
LMNB1-202ENST00000395354 CD300LFQ8TDQ1 290 aa15.87■□□□□ 0.13
LMNB1-202ENST00000395354 C10orf105Q8TEF2 133 aa15.87■□□□□ 0.13
LMNB1-202ENST00000395354 ZNF471Q9BX82 626 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms