RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 GAB2Q9UQC2 676 aa17.37■□□□□ 0.37
CLK3-202ENST00000395066 MKRN2OSH3BPM6 223 aa17.37■□□□□ 0.37
CLK3-202ENST00000395066 AMBPP02760 352 aa17.37■□□□□ 0.37
CLK3-202ENST00000395066 COL10A1Q03692 680 aa17.37■□□□□ 0.37
CLK3-202ENST00000395066 ZNF816Q0VGE8 651 aaPredicted RBP17.37■□□□□ 0.37
CLK3-202ENST00000395066 NCR3LG1Q68D85 454 aa17.37■□□□□ 0.37
CLK3-202ENST00000395066 FGFRL1Q8N441 504 aa17.37■□□□□ 0.37
CLK3-202ENST00000395066 OR1L1Q8NH94 360 aa17.37■□□□□ 0.37
CLK3-202ENST00000395066 RNASEH2CQ8TDP1 164 aaKnown RBP17.37■□□□□ 0.37
CLK3-202ENST00000395066 SMIM7Q9BQ49 75 aa17.37■□□□□ 0.37
CLK3-202ENST00000395066 IER2Q9BTL4 223 aa17.37■□□□□ 0.37
CLK3-202ENST00000395066 TMEM9BQ9NQ34 198 aa17.37■□□□□ 0.37
CLK3-202ENST00000395066 WNT9BO14905 357 aa17.36■□□□□ 0.37
CLK3-202ENST00000395066 KRASP01116 189 aa17.36■□□□□ 0.37
CLK3-202ENST00000395066 GZMBP10144 247 aa17.36■□□□□ 0.37
CLK3-202ENST00000395066 NDUFB7P17568 137 aa17.36■□□□□ 0.37
CLK3-202ENST00000395066 FGF7P21781 194 aa17.36■□□□□ 0.37
CLK3-202ENST00000395066 HBG1P69891 147 aa17.36■□□□□ 0.37
CLK3-202ENST00000395066 HBG2P69892 147 aa17.36■□□□□ 0.37
CLK3-202ENST00000395066 ZNF826PQ6ZT77 177 aa17.36■□□□□ 0.37
CLK3-202ENST00000395066 C16orf82Q7Z2V1 217 aa17.36■□□□□ 0.37
CLK3-202ENST00000395066 GCNT2Q8N0V5 402 aa17.36■□□□□ 0.37
CLK3-202ENST00000395066 OR1P1Q8NH06 330 aa17.36■□□□□ 0.37
CLK3-202ENST00000395066 LSM10Q969L4 123 aaKnown RBP17.36■□□□□ 0.37
CLK3-202ENST00000395066 ABI3Q9P2A4 366 aa17.36■□□□□ 0.37
CLK3-202ENST00000395066 ST8SIA5O15466 376 aa17.36■□□□□ 0.37
CLK3-202ENST00000395066 PSPNO60542 156 aa17.36■□□□□ 0.37
CLK3-202ENST00000395066 ZNF737O75373 536 aa17.36■□□□□ 0.37
CLK3-202ENST00000395066 CLDN1O95832 211 aa17.36■□□□□ 0.37
CLK3-202ENST00000395066 PFN1P07737 140 aaKnown RBP17.36■□□□□ 0.37
CLK3-202ENST00000395066 SP1P08047 785 aa17.36■□□□□ 0.37
CLK3-202ENST00000395066 DEFA4P12838 97 aa17.36■□□□□ 0.37
CLK3-202ENST00000395066 G6PCP35575 357 aa17.36■□□□□ 0.37
CLK3-202ENST00000395066 SPINK9Q5DT21 86 aa17.36■□□□□ 0.37
CLK3-202ENST00000395066 DMRTC2Q8IXT2 367 aaPredicted RBP17.36■□□□□ 0.37
CLK3-202ENST00000395066 C5orf30Q96GV9 206 aa17.36■□□□□ 0.37
CLK3-202ENST00000395066 RTL8AQ9BWD3 113 aa17.36■□□□□ 0.37
CLK3-202ENST00000395066 SPRR3Q9UBC9 169 aa17.36■□□□□ 0.37
CLK3-202ENST00000395066 RPL30P62888 115 aaKnown RBP17.35■□□□□ 0.37
CLK3-202ENST00000395066 FBXW9Q5XUX1 488 aa17.35■□□□□ 0.37
CLK3-202ENST00000395066 NECAP1Q8NC96 275 aa17.35■□□□□ 0.37
CLK3-202ENST00000395066 TMEM241Q24JQ0 296 aa17.35■□□□□ 0.37
CLK3-202ENST00000395066 BTNL3Q6UXE8 466 aa17.35■□□□□ 0.37
CLK3-202ENST00000395066 CYP2G1PQ6ZSU1 146 aa17.35■□□□□ 0.37
CLK3-202ENST00000395066 TMPRSS7Q7RTY8 843 aa17.35■□□□□ 0.37
CLK3-202ENST00000395066 PINX1Q96BK5 328 aaKnown RBP17.35■□□□□ 0.37
CLK3-202ENST00000395066 PYGO2Q9BRQ0 406 aa17.35■□□□□ 0.37
CLK3-202ENST00000395066 AGMATQ9BSE5 352 aa17.35■□□□□ 0.37
CLK3-202ENST00000395066 WDR61Q9GZS3 305 aaKnown RBP17.35■□□□□ 0.37
CLK3-202ENST00000395066 LIN7CQ9NUP9 197 aaKnown RBP17.35■□□□□ 0.37
CLK3-202ENST00000395066 CLN8Q9UBY8 286 aa17.35■□□□□ 0.37
CLK3-202ENST00000395066 LYZL6O75951 148 aa17.34■□□□□ 0.37
CLK3-202ENST00000395066 SELLP14151 372 aa17.34■□□□□ 0.37
CLK3-202ENST00000395066 PMP22Q01453 160 aa17.34■□□□□ 0.37
CLK3-202ENST00000395066 SLC38A11Q08AI6 406 aa17.34■□□□□ 0.37
CLK3-202ENST00000395066 OR52L2PQ8NGH6 319 aa17.34■□□□□ 0.37
CLK3-202ENST00000395066 LAMP3Q9UQV4 416 aa17.34■□□□□ 0.37
CLK3-202ENST00000395066 BOD1L1Q8NFC6 3051 aa17.34■□□□□ 0.37
CLK3-202ENST00000395066 LNP1A1A4G5 178 aa17.34■□□□□ 0.37
CLK3-202ENST00000395066 SMPD2O60906 423 aa17.34■□□□□ 0.37
CLK3-202ENST00000395066 TUBG1P23258 451 aa17.34■□□□□ 0.37
CLK3-202ENST00000395066 OR3A1P47881 315 aa17.34■□□□□ 0.37
CLK3-202ENST00000395066 PPP1CBP62140 327 aa17.34■□□□□ 0.37
CLK3-202ENST00000395066 TPRX1Q8N7U7 411 aa17.34■□□□□ 0.37
CLK3-202ENST00000395066 GATAD1Q8WUU5 269 aa17.34■□□□□ 0.37
CLK3-202ENST00000395066 LHX4Q969G2 390 aa17.34■□□□□ 0.37
CLK3-202ENST00000395066 ZPBPQ9BS86 351 aa17.34■□□□□ 0.37
CLK3-202ENST00000395066 DDA1Q9BW61 102 aa17.34■□□□□ 0.37
CLK3-202ENST00000395066 OR2D2Q9H210 308 aa17.34■□□□□ 0.37
CLK3-202ENST00000395066 NPIPB11E5RHQ5 1161 aa17.34■□□□□ 0.37
CLK3-202ENST00000395066 MPLP40238 635 aa17.34■□□□□ 0.37
CLK3-202ENST00000395066 ERVK11-1P61568 191 aa17.34■□□□□ 0.37
CLK3-202ENST00000395066 MEF2BQ02080 365 aaPredicted RBP17.34■□□□□ 0.37
CLK3-202ENST00000395066 SLC10A1Q14973 349 aa17.34■□□□□ 0.37
CLK3-202ENST00000395066 TBC1D28Q2M2D7 210 aa17.34■□□□□ 0.37
CLK3-202ENST00000395066 RPP25LQ8N5L8 163 aaKnown RBP17.34■□□□□ 0.37
CLK3-202ENST00000395066 SLC25A40Q8TBP6 338 aa17.34■□□□□ 0.37
CLK3-202ENST00000395066 C2orf88Q9BSF0 95 aa17.34■□□□□ 0.37
CLK3-202ENST00000395066 ACTR3CQ9C0K3 210 aaPredicted RBP17.34■□□□□ 0.37
CLK3-202ENST00000395066 SLC25A22Q9H936 323 aa17.34■□□□□ 0.37
CLK3-202ENST00000395066 SLC39A9Q9NUM3 307 aa17.34■□□□□ 0.37
CLK3-202ENST00000395066 XKRY2A2RUG3 117 aa17.33■□□□□ 0.36
CLK3-202ENST00000395066 A8MWP6 167 aa17.33■□□□□ 0.36
CLK3-202ENST00000395066 BSXQ3C1V8 233 aa17.33■□□□□ 0.36
CLK3-202ENST00000395066 LBHQ53QV2 105 aaPredicted RBP17.33■□□□□ 0.36
CLK3-202ENST00000395066 TAF15Q92804 592 aaKnown RBP eCLIP17.33■□□□□ 0.36
CLK3-202ENST00000395066 MISP3Q96FF7 219 aa17.33■□□□□ 0.36
CLK3-202ENST00000395066 LRP5LA4QPB2 252 aa17.33■□□□□ 0.36
CLK3-202ENST00000395066 WISP2O76076 250 aa17.33■□□□□ 0.36
CLK3-202ENST00000395066 AESQ08117 197 aa17.33■□□□□ 0.36
CLK3-202ENST00000395066 PMS2P11Q13670 270 aa17.33■□□□□ 0.36
CLK3-202ENST00000395066 ACSM6Q6P461 480 aa17.33■□□□□ 0.36
CLK3-202ENST00000395066 OR51G1Q8NGK1 321 aa17.33■□□□□ 0.36
CLK3-202ENST00000395066 ZDHHC16Q969W1 377 aa17.33■□□□□ 0.36
CLK3-202ENST00000395066 COLQQ9Y215 455 aaPredicted RBP17.33■□□□□ 0.36
CLK3-202ENST00000395066 KBTBD11O94819 623 aa17.32■□□□□ 0.36
CLK3-202ENST00000395066 WNT2P09544 360 aa17.32■□□□□ 0.36
CLK3-202ENST00000395066 MPV17P39210 176 aa17.32■□□□□ 0.36
CLK3-202ENST00000395066 GALR1P47211 349 aa17.32■□□□□ 0.36
CLK3-202ENST00000395066 CLEC12BQ2HXU8 276 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms