RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 ERVS71-1P61550 626 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 TGIF1Q15583 401 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 TWIST1Q15672 202 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 ST3GAL2Q16842 350 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 HLA-DRB5Q30154 266 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 OR4D11Q8NGI4 311 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 TUBA4BQ9H853 241 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 NEUROG3Q9Y4Z2 214 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 PSG2P11465 335 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 LTBRP36941 435 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 TMEM255AQ5JRV8 349 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 TMEM105Q8N8V8 129 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 OR5P3Q8WZ94 311 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 AUP1Q9Y679 476 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 IGLV3-32A0A0A0MS00 114 aa6.15□□□□□ -1.42
CCDC171-201ENST00000380701 C19orf67A6NJJ6 358 aa6.15□□□□□ -1.42
CCDC171-201ENST00000380701 MGPP08493 103 aa6.15□□□□□ -1.42
CCDC171-201ENST00000380701 PMCHP20382 165 aa6.15□□□□□ -1.42
CCDC171-201ENST00000380701 LBHQ53QV2 105 aaPredicted RBP6.15□□□□□ -1.42
CCDC171-201ENST00000380701 ERASQ7Z444 233 aa6.15□□□□□ -1.42
CCDC171-201ENST00000380701 SLC7A5P1Q8MH63 180 aa6.15□□□□□ -1.42
CCDC171-201ENST00000380701 RELL2Q8NC24 303 aaPredicted RBP6.15□□□□□ -1.42
CCDC171-201ENST00000380701 TMEM70Q9BUB7 260 aa6.15□□□□□ -1.42
CCDC171-201ENST00000380701 LRRC37AA6NMS7 1700 aa6.15□□□□□ -1.42
CCDC171-201ENST00000380701 TRBV5-7A0A0A0MS05 114 aa6.15□□□□□ -1.42
CCDC171-201ENST00000380701 TMEM238LA0A1B0GVL6 79 aa6.15□□□□□ -1.42
CCDC171-201ENST00000380701 NKX2-6A6NCS4 301 aa6.15□□□□□ -1.42
CCDC171-201ENST00000380701 FAM181BA6NEQ2 426 aa6.15□□□□□ -1.42
CCDC171-201ENST00000380701 A6NJY4 79 aa6.15□□□□□ -1.42
CCDC171-201ENST00000380701 HAX1O00165 279 aa6.15□□□□□ -1.42
CCDC171-201ENST00000380701 LINC00869P0C866 280 aa6.15□□□□□ -1.42
CCDC171-201ENST00000380701 OR10J1P30954 320 aa6.15□□□□□ -1.42
CCDC171-201ENST00000380701 ZFP36L1Q07352 338 aaKnown RBP6.15□□□□□ -1.42
CCDC171-201ENST00000380701 CLRN3Q8NCR9 226 aa6.15□□□□□ -1.42
CCDC171-201ENST00000380701 OR10AC1Q8NH08 325 aa6.15□□□□□ -1.42
CCDC171-201ENST00000380701 FAM53AQ6NSI3 398 aaPredicted RBP6.15□□□□□ -1.43
CCDC171-201ENST00000380701 ZNF383Q8NA42 475 aa6.15□□□□□ -1.43
CCDC171-201ENST00000380701 POC1AQ8NBT0 407 aa6.15□□□□□ -1.43
CCDC171-201ENST00000380701 TRAF4Q9BUZ4 470 aaPredicted RBP6.15□□□□□ -1.43
CCDC171-201ENST00000380701 YAE1D1Q9NRH1 226 aa6.15□□□□□ -1.43
CCDC171-201ENST00000380701 AP5S1Q9NUS5 200 aa6.15□□□□□ -1.43
CCDC171-201ENST00000380701 LINC00312Q9Y6C7 94 aa6.15□□□□□ -1.43
CCDC171-201ENST00000380701 CHCHD2Q9Y6H1 151 aaPredicted RBP6.15□□□□□ -1.43
CCDC171-201ENST00000380701 TIMP3P35625 211 aa6.15□□□□□ -1.43
CCDC171-201ENST00000380701 SCGB1D4Q6XE38 83 aa6.15□□□□□ -1.43
CCDC171-201ENST00000380701 GVQW1Q8N7I0 195 aa6.15□□□□□ -1.43
CCDC171-201ENST00000380701 MRPL24Q96A35 216 aaKnown RBP6.15□□□□□ -1.43
CCDC171-201ENST00000380701 LPAR5Q9H1C0 372 aa6.15□□□□□ -1.43
CCDC171-201ENST00000380701 TAF1P21675 1872 aa6.15□□□□□ -1.43
CCDC171-201ENST00000380701 PLXNB2O15031 1838 aa6.15□□□□□ -1.43
CCDC171-201ENST00000380701 AANATQ16613 207 aa6.15□□□□□ -1.43
CCDC171-201ENST00000380701 OR51G1Q8NGK1 321 aa6.15□□□□□ -1.43
CCDC171-201ENST00000380701 SSMEM1Q8WWF3 244 aa6.15□□□□□ -1.43
CCDC171-201ENST00000380701 COX6CP09669 75 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 ARF6P62330 175 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 COTL1Q14019 142 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 FXYD3Q14802 87 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 HIST3H3Q16695 136 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 DHRS11Q6UWP2 260 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 WDFY1Q8IWB7 410 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 COL25A1Q9BXS0 654 aaPredicted RBP6.14□□□□□ -1.43
CCDC171-201ENST00000380701 PXMP4Q9Y6I8 212 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 MYO7AQ13402 2215 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 C8orf88P0DMB2 117 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 CIRBPQ14011 172 aaKnown RBP6.14□□□□□ -1.43
CCDC171-201ENST00000380701 WFDC3Q8IUB2 231 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 PNKDQ8N490 385 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 OR2D3Q8NGH3 330 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 PACRGQ96M98 296 aaPredicted RBP6.14□□□□□ -1.43
CCDC171-201ENST00000380701 DNAJC4Q9NNZ3 241 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 TMEM140Q9NV12 185 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 FAM206AQ9NX38 181 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 LHFPL6Q9Y693 200 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 TRAV8-7A0A075B6U6 113 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 TMEM218A2RU14 115 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 ZNF253O75346 499 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 CELA2AP08217 269 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 SMUG1Q53HV7 270 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 ANGPTL6Q8NI99 470 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 Q96M66 194 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 MS4A10Q96PG2 267 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 DLEC1Q9Y238 1755 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 C17orf100A8MU93 164 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 NTN3O00634 580 aaPredicted RBP6.14□□□□□ -1.43
CCDC171-201ENST00000380701 PAX1P15863 534 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 DLX6P56179 175 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 HERPUD1Q15011 391 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 GTF3AQ92664 365 aaKnown RBP6.14□□□□□ -1.43
CCDC171-201ENST00000380701 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.14□□□□□ -1.43
CCDC171-201ENST00000380701 EFEMP2O95967 443 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 VAMP3Q15836 100 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 DMRTC1Q5HYR2 192 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 ABLIM2Q6H8Q1 611 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 FAM166AQ6J272 317 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 LRP11Q86VZ4 500 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 APCDD1LQ8NCL9 501 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 SMIM8Q96KF7 97 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 NEURL2Q9BR09 285 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 NIT2Q9NQR4 276 aa6.14□□□□□ -1.43
CCDC171-201ENST00000380701 RCC2Q9P258 522 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms