RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 BVESQ8NE79 360 aa12.31□□□□□ -0.44
TCOF1-202ENST00000377797 TP53RKQ96S44 253 aa12.31□□□□□ -0.44
TCOF1-202ENST00000377797 CLCF1Q9UBD9 225 aa12.31□□□□□ -0.44
TCOF1-202ENST00000377797 SOX15O60248 233 aa12.3□□□□□ -0.44
TCOF1-202ENST00000377797 PGA5P0DJD9 388 aa12.3□□□□□ -0.44
TCOF1-202ENST00000377797 ZP3P21754 424 aa12.3□□□□□ -0.44
TCOF1-202ENST00000377797 TBR1Q16650 682 aa12.3□□□□□ -0.44
TCOF1-202ENST00000377797 DRAM1Q8N682 238 aa12.3□□□□□ -0.44
TCOF1-202ENST00000377797 OR52M1Q8NGK5 317 aa12.3□□□□□ -0.44
TCOF1-202ENST00000377797 GPR146Q96CH1 333 aa12.3□□□□□ -0.44
TCOF1-202ENST00000377797 IGHV1-18A0A0C4DH31 117 aa12.3□□□□□ -0.44
TCOF1-202ENST00000377797 LEUTXA8MZ59 168 aa12.3□□□□□ -0.44
TCOF1-202ENST00000377797 SRSF10O75494 262 aaKnown RBP12.3□□□□□ -0.44
TCOF1-202ENST00000377797 NDUFA6P56556 154 aa12.3□□□□□ -0.44
TCOF1-202ENST00000377797 PIEZO1Q92508 2521 aa12.3□□□□□ -0.44
TCOF1-202ENST00000377797 SH2D2AQ9NP31 389 aa12.3□□□□□ -0.44
TCOF1-202ENST00000377797 IGKV1-27A0A075B6S5 117 aa12.3□□□□□ -0.44
TCOF1-202ENST00000377797 PRNDQ9UKY0 176 aa12.3□□□□□ -0.44
TCOF1-202ENST00000377797 MMP24Q9Y5R2 645 aa12.3□□□□□ -0.44
TCOF1-202ENST00000377797 A0A1W2PN81 502 aa12.3□□□□□ -0.44
TCOF1-202ENST00000377797 ZNF250P15622 560 aa12.3□□□□□ -0.44
TCOF1-202ENST00000377797 TIMP3P35625 211 aa12.3□□□□□ -0.44
TCOF1-202ENST00000377797 CHRNA7P36544 502 aa12.3□□□□□ -0.44
TCOF1-202ENST00000377797 NCR3LG1Q68D85 454 aa12.3□□□□□ -0.44
TCOF1-202ENST00000377797 SELENOHQ8IZQ5 122 aaKnown RBP12.3□□□□□ -0.44
TCOF1-202ENST00000377797 OR10G4Q8NGN3 311 aa12.3□□□□□ -0.44
TCOF1-202ENST00000377797 OR10G9Q8NGN4 311 aa12.3□□□□□ -0.44
TCOF1-202ENST00000377797 OR10G7Q8NGN6 311 aa12.3□□□□□ -0.44
TCOF1-202ENST00000377797 C2CD4CQ8TF44 421 aa12.3□□□□□ -0.44
TCOF1-202ENST00000377797 TMEM230Q96A57 120 aa12.3□□□□□ -0.44
TCOF1-202ENST00000377797 BORCS7Q96B45 105 aa12.3□□□□□ -0.44
TCOF1-202ENST00000377797 NDUFA2O43678 99 aa12.29□□□□□ -0.44
TCOF1-202ENST00000377797 OR2C1O95371 312 aa12.29□□□□□ -0.44
TCOF1-202ENST00000377797 ATP6V0CP27449 155 aa12.29□□□□□ -0.44
TCOF1-202ENST00000377797 AKR1C3P42330 323 aa12.29□□□□□ -0.44
TCOF1-202ENST00000377797 RTBDNQ9BSG5 229 aaPredicted RBP12.29□□□□□ -0.44
TCOF1-202ENST00000377797 LPAR2Q9HBW0 351 aa12.29□□□□□ -0.44
TCOF1-202ENST00000377797 DOCK10Q96BY6 2186 aa12.29□□□□□ -0.44
TCOF1-202ENST00000377797 MED13Q9UHV7 2174 aa12.29□□□□□ -0.44
TCOF1-202ENST00000377797 B9A039 149 aa12.29□□□□□ -0.44
TCOF1-202ENST00000377797 BTNL8Q6UX41 500 aa12.29□□□□□ -0.44
TCOF1-202ENST00000377797 TCTEX1D1Q8N7M0 179 aa12.29□□□□□ -0.44
TCOF1-202ENST00000377797 C15orf54Q8N8G6 183 aa12.29□□□□□ -0.44
TCOF1-202ENST00000377797 LILRB1Q8NHL6 650 aaPredicted RBP12.29□□□□□ -0.44
TCOF1-202ENST00000377797 SCGB1D1O95968 90 aa12.29□□□□□ -0.44
TCOF1-202ENST00000377797 DAOP14920 347 aa12.29□□□□□ -0.44
TCOF1-202ENST00000377797 APOBEC3AP31941 199 aaPredicted RBP12.29□□□□□ -0.44
TCOF1-202ENST00000377797 HGFACQ04756 655 aa12.29□□□□□ -0.44
TCOF1-202ENST00000377797 JPT1Q9UK76 154 aa12.29□□□□□ -0.44
TCOF1-202ENST00000377797 IGHV1-69-2A0A0G2JMI3 117 aa12.29□□□□□ -0.44
TCOF1-202ENST00000377797 LINC00862A6NCI5 91 aa12.29□□□□□ -0.44
TCOF1-202ENST00000377797 HSBP1L1C9JCN9 74 aa12.29□□□□□ -0.44
TCOF1-202ENST00000377797 SEC11BP0C7V7 166 aa12.29□□□□□ -0.44
TCOF1-202ENST00000377797 MUC1P15941 1255 aaPredicted RBP12.29□□□□□ -0.44
TCOF1-202ENST00000377797 FGF8P55075 233 aaPredicted RBP12.29□□□□□ -0.44
TCOF1-202ENST00000377797 IFT22Q9H7X7 185 aa12.29□□□□□ -0.44
TCOF1-202ENST00000377797 IGKV1D-8A0A087WSZ0 117 aa12.28□□□□□ -0.44
TCOF1-202ENST00000377797 PPP1R2P9O14990 202 aa12.28□□□□□ -0.44
TCOF1-202ENST00000377797 NMBP08949 121 aa12.28□□□□□ -0.44
TCOF1-202ENST00000377797 ZNF735P0CB33 412 aa12.28□□□□□ -0.44
TCOF1-202ENST00000377797 J3QR06 171 aa12.28□□□□□ -0.44
TCOF1-202ENST00000377797 ZNF561Q8N587 486 aa12.28□□□□□ -0.44
TCOF1-202ENST00000377797 SPSB4Q96A44 273 aa12.28□□□□□ -0.44
TCOF1-202ENST00000377797 DCTN5Q9BTE1 182 aa12.28□□□□□ -0.44
TCOF1-202ENST00000377797 PROB1E7EW31 1015 aa12.28□□□□□ -0.44
TCOF1-202ENST00000377797 NPY1RP25929 384 aa12.28□□□□□ -0.44
TCOF1-202ENST00000377797 CDC34P49427 236 aaPredicted RBP12.28□□□□□ -0.44
TCOF1-202ENST00000377797 PRSS33Q8NF86 280 aa12.28□□□□□ -0.44
TCOF1-202ENST00000377797 IDI2-AS1Q9NZ38 188 aa12.28□□□□□ -0.44
TCOF1-202ENST00000377797 CD8AP01732 235 aa12.28□□□□□ -0.44
TCOF1-202ENST00000377797 DHRS11Q6UWP2 260 aa12.28□□□□□ -0.44
TCOF1-202ENST00000377797 MRPL30Q8TCC3 161 aaKnown RBP12.28□□□□□ -0.44
TCOF1-202ENST00000377797 GALNT14Q96FL9 552 aa12.28□□□□□ -0.44
TCOF1-202ENST00000377797 CACNA1AO00555 2505 aa12.27□□□□□ -0.44
TCOF1-202ENST00000377797 E9PLN8 166 aa12.27□□□□□ -0.44
TCOF1-202ENST00000377797 UBE2G1P62253 170 aa12.27□□□□□ -0.44
TCOF1-202ENST00000377797 RUNX1Q01196 453 aa12.27□□□□□ -0.44
TCOF1-202ENST00000377797 ZCCHC24Q8N2G6 241 aaKnown RBP12.27□□□□□ -0.44
TCOF1-202ENST00000377797 OR13D1Q8NGV5 346 aa12.27□□□□□ -0.44
TCOF1-202ENST00000377797 PLPPR1Q8TBJ4 325 aa12.27□□□□□ -0.44
TCOF1-202ENST00000377797 PLSCR2Q9NRY7 297 aa12.27□□□□□ -0.44
TCOF1-202ENST00000377797 KIAA0141Q14154 515 aaPredicted RBP12.27□□□□□ -0.45
TCOF1-202ENST00000377797 WDFY1Q8IWB7 410 aa12.27□□□□□ -0.45
TCOF1-202ENST00000377797 FAM216BQ8N7L0 139 aa12.27□□□□□ -0.45
TCOF1-202ENST00000377797 OR13A1Q8NGR1 328 aa12.27□□□□□ -0.45
TCOF1-202ENST00000377797 AQP10Q96PS8 301 aa12.27□□□□□ -0.45
TCOF1-202ENST00000377797 MRPL37Q9BZE1 423 aaKnown RBP12.27□□□□□ -0.45
TCOF1-202ENST00000377797 SLC35B3Q9H1N7 401 aa12.27□□□□□ -0.45
TCOF1-202ENST00000377797 SEBOXQ9HB31 216 aaPredicted RBP12.27□□□□□ -0.45
TCOF1-202ENST00000377797 IGHV3-72A0A0B4J1Y9 119 aa12.27□□□□□ -0.45
TCOF1-202ENST00000377797 RBP4P02753 201 aa12.27□□□□□ -0.45
TCOF1-202ENST00000377797 TIGITQ495A1 244 aa12.27□□□□□ -0.45
TCOF1-202ENST00000377797 GAPDHP04406 335 aaKnown RBP12.27□□□□□ -0.45
TCOF1-202ENST00000377797 ACSM6Q6P461 480 aa12.27□□□□□ -0.45
TCOF1-202ENST00000377797 WDR82Q6UXN9 313 aa12.27□□□□□ -0.45
TCOF1-202ENST00000377797 OR1L8Q8NGR8 309 aa12.27□□□□□ -0.45
TCOF1-202ENST00000377797 LURAP1Q96LR2 239 aa12.27□□□□□ -0.45
TCOF1-202ENST00000377797 NRIP2Q9BQI9 281 aa12.27□□□□□ -0.45
TCOF1-202ENST00000377797 PCGF1Q9BSM1 259 aa12.27□□□□□ -0.45
TCOF1-202ENST00000377797 HKR1P10072 659 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms