RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 SFT2D1Q8WV19 159 aa13.32□□□□□ -0.28
CNKSR1-202ENST00000374253 VSIRQ9H7M9 311 aa13.32□□□□□ -0.28
CNKSR1-202ENST00000374253 ODAMA1E959 279 aa13.31□□□□□ -0.28
CNKSR1-202ENST00000374253 C15orf65H3BRN8 121 aa13.31□□□□□ -0.28
CNKSR1-202ENST00000374253 IFNL4K9M1U5 179 aa13.31□□□□□ -0.28
CNKSR1-202ENST00000374253 CYB5R3P00387 301 aaPredicted RBP13.31□□□□□ -0.28
CNKSR1-202ENST00000374253 CD55P08174 381 aa13.31□□□□□ -0.28
CNKSR1-202ENST00000374253 FBP1P09467 338 aa13.31□□□□□ -0.28
CNKSR1-202ENST00000374253 GLRXP35754 106 aa13.31□□□□□ -0.28
CNKSR1-202ENST00000374253 UBE2KP61086 200 aa13.31□□□□□ -0.28
CNKSR1-202ENST00000374253 SPSB3Q6PJ21 355 aa13.31□□□□□ -0.28
CNKSR1-202ENST00000374253 CD300LFQ8TDQ1 290 aa13.31□□□□□ -0.28
CNKSR1-202ENST00000374253 ZDHHC16Q969W1 377 aa13.31□□□□□ -0.28
CNKSR1-202ENST00000374253 RBKSQ9H477 322 aa13.31□□□□□ -0.28
CNKSR1-202ENST00000374253 WSB1Q9Y6I7 421 aa13.31□□□□□ -0.28
CNKSR1-202ENST00000374253 RNF212BA8MTL3 300 aa13.31□□□□□ -0.28
CNKSR1-202ENST00000374253 A8MXE2 369 aa13.31□□□□□ -0.28
CNKSR1-202ENST00000374253 ATXN7O15265 892 aaPredicted RBP13.31□□□□□ -0.28
CNKSR1-202ENST00000374253 SPINT2O43291 252 aa13.31□□□□□ -0.28
CNKSR1-202ENST00000374253 SNRNP70P08621 437 aaKnown RBP13.31□□□□□ -0.28
CNKSR1-202ENST00000374253 H2AFB1P0C5Y9 115 aa13.31□□□□□ -0.28
CNKSR1-202ENST00000374253 SLC25A6P12236 298 aa13.31□□□□□ -0.28
CNKSR1-202ENST00000374253 TUBG1P23258 451 aa13.31□□□□□ -0.28
CNKSR1-202ENST00000374253 CD200P41217 278 aa13.31□□□□□ -0.28
CNKSR1-202ENST00000374253 PEA15Q15121 130 aa13.31□□□□□ -0.28
CNKSR1-202ENST00000374253 AKR1C8PQ5T2L2 129 aa13.31□□□□□ -0.28
CNKSR1-202ENST00000374253 DOLPP1Q86YN1 238 aa13.31□□□□□ -0.28
CNKSR1-202ENST00000374253 AIFM2Q9BRQ8 373 aa13.31□□□□□ -0.28
CNKSR1-202ENST00000374253 TUBG2Q9NRH3 451 aa13.31□□□□□ -0.28
CNKSR1-202ENST00000374253 A0A0G2JNJ9 132 aa13.3□□□□□ -0.28
CNKSR1-202ENST00000374253 M0R036 132 aa13.3□□□□□ -0.28
CNKSR1-202ENST00000374253 EIF4EBP1Q13541 118 aaPredicted RBP13.3□□□□□ -0.28
CNKSR1-202ENST00000374253 DHRS7BQ6IAN0 325 aaPredicted RBP13.3□□□□□ -0.28
CNKSR1-202ENST00000374253 SSX9Q7RTT3 188 aa13.3□□□□□ -0.28
CNKSR1-202ENST00000374253 WFDC8Q8IUA0 241 aa13.3□□□□□ -0.28
CNKSR1-202ENST00000374253 LILRB2Q8N423 598 aa13.3□□□□□ -0.28
CNKSR1-202ENST00000374253 OR10Z1Q8NGY1 313 aa13.3□□□□□ -0.28
CNKSR1-202ENST00000374253 AGMATQ9BSE5 352 aa13.3□□□□□ -0.28
CNKSR1-202ENST00000374253 RPS10P5Q9NQ39 176 aa13.3□□□□□ -0.28
CNKSR1-202ENST00000374253 Q9UFV3 132 aa13.3□□□□□ -0.28
CNKSR1-202ENST00000374253 MMP24Q9Y5R2 645 aa13.3□□□□□ -0.28
CNKSR1-202ENST00000374253 YLPM1P49750 1951 aaKnown RBP13.3□□□□□ -0.28
CNKSR1-202ENST00000374253 SPTBN4Q9H254 2564 aa13.3□□□□□ -0.28
CNKSR1-202ENST00000374253 IFNA5P01569 189 aa13.3□□□□□ -0.28
CNKSR1-202ENST00000374253 CEACAM8P31997 349 aaPredicted RBP13.3□□□□□ -0.28
CNKSR1-202ENST00000374253 RPL39P5Q59GN2 51 aa13.3□□□□□ -0.28
CNKSR1-202ENST00000374253 NCR3LG1Q68D85 454 aa13.3□□□□□ -0.28
CNKSR1-202ENST00000374253 FAM169BQ8N8A8 192 aa13.3□□□□□ -0.28
CNKSR1-202ENST00000374253 SFXN3Q9BWM7 321 aa13.3□□□□□ -0.28
CNKSR1-202ENST00000374253 LRBAP50851 2863 aa13.3□□□□□ -0.28
CNKSR1-202ENST00000374253 ATRXP46100 2492 aa13.29□□□□□ -0.28
CNKSR1-202ENST00000374253 UMAD1C9J7I0 102 aa13.29□□□□□ -0.28
CNKSR1-202ENST00000374253 PROP1O75360 226 aa13.29□□□□□ -0.28
CNKSR1-202ENST00000374253 WNT2P09544 360 aa13.29□□□□□ -0.28
CNKSR1-202ENST00000374253 TAS2R30P59541 319 aa13.29□□□□□ -0.28
CNKSR1-202ENST00000374253 TNFRSF9Q07011 255 aa13.29□□□□□ -0.28
CNKSR1-202ENST00000374253 CATR1Q13166 79 aa13.29□□□□□ -0.28
CNKSR1-202ENST00000374253 VKORC1L1Q8N0U8 176 aa13.29□□□□□ -0.28
CNKSR1-202ENST00000374253 LURAP1Q96LR2 239 aa13.29□□□□□ -0.28
CNKSR1-202ENST00000374253 UBE2L5PA0A1B0GUS4 154 aa13.29□□□□□ -0.28
CNKSR1-202ENST00000374253 A0A1B0GWJ7 208 aa13.29□□□□□ -0.28
CNKSR1-202ENST00000374253 CD40P25942 277 aa13.29□□□□□ -0.28
CNKSR1-202ENST00000374253 ZNF134P52741 427 aa13.29□□□□□ -0.28
CNKSR1-202ENST00000374253 HFEQ30201 348 aa13.29□□□□□ -0.28
CNKSR1-202ENST00000374253 AWAT1Q58HT5 328 aa13.29□□□□□ -0.28
CNKSR1-202ENST00000374253 ZNF525Q8N782 197 aa13.29□□□□□ -0.28
CNKSR1-202ENST00000374253 Q8NA96 180 aa13.29□□□□□ -0.28
CNKSR1-202ENST00000374253 SNRNP40Q96DI7 357 aaKnown RBP13.29□□□□□ -0.28
CNKSR1-202ENST00000374253 GNPNAT1Q96EK6 184 aaPredicted RBP13.29□□□□□ -0.28
CNKSR1-202ENST00000374253 HCFC1P51610 2035 aa13.28□□□□□ -0.28
CNKSR1-202ENST00000374253 SLC31A2O15432 143 aa13.28□□□□□ -0.28
CNKSR1-202ENST00000374253 ZG16O60844 167 aa13.28□□□□□ -0.28
CNKSR1-202ENST00000374253 GPR12P47775 334 aa13.28□□□□□ -0.28
CNKSR1-202ENST00000374253 FGF8P55075 233 aaPredicted RBP13.28□□□□□ -0.28
CNKSR1-202ENST00000374253 ELLP55199 621 aaPredicted RBP13.28□□□□□ -0.28
CNKSR1-202ENST00000374253 OR2B8PP59922 312 aa13.28□□□□□ -0.28
CNKSR1-202ENST00000374253 MZT1Q08AG7 82 aa13.28□□□□□ -0.28
CNKSR1-202ENST00000374253 ISOC2Q96AB3 205 aa13.28□□□□□ -0.28
CNKSR1-202ENST00000374253 CLCC1Q96S66 551 aa13.28□□□□□ -0.28
CNKSR1-202ENST00000374253 KPTNQ9Y664 436 aa13.28□□□□□ -0.28
CNKSR1-202ENST00000374253 TPRP12270 2363 aaKnown RBP13.28□□□□□ -0.28
CNKSR1-202ENST00000374253 FCGR3BO75015 233 aa13.28□□□□□ -0.28
CNKSR1-202ENST00000374253 DFFBO76075 338 aa13.28□□□□□ -0.28
CNKSR1-202ENST00000374253 IGHV1-46P01743 117 aa13.28□□□□□ -0.28
CNKSR1-202ENST00000374253 CCL8P80075 99 aa13.28□□□□□ -0.28
CNKSR1-202ENST00000374253 TNFAIP6P98066 277 aaPredicted RBP13.28□□□□□ -0.28
CNKSR1-202ENST00000374253 KRTCAP3Q53RY4 240 aa13.28□□□□□ -0.28
CNKSR1-202ENST00000374253 SCGB1C1Q8TD33 95 aa13.28□□□□□ -0.28
CNKSR1-202ENST00000374253 OR4C12Q96R67 309 aa13.28□□□□□ -0.28
CNKSR1-202ENST00000374253 SCNM1Q9BWG6 230 aa13.28□□□□□ -0.28
CNKSR1-202ENST00000374253 GCM1Q9NP62 436 aa13.28□□□□□ -0.28
CNKSR1-202ENST00000374253 PRRG2O14669 202 aa13.27□□□□□ -0.29
CNKSR1-202ENST00000374253 TLE1Q04724 770 aa13.27□□□□□ -0.29
CNKSR1-202ENST00000374253 LCN15Q6UWW0 184 aa13.27□□□□□ -0.29
CNKSR1-202ENST00000374253 SSX7Q7RTT5 188 aa13.27□□□□□ -0.29
CNKSR1-202ENST00000374253 SPACA3Q8IXA5 215 aa13.27□□□□□ -0.29
CNKSR1-202ENST00000374253 ZFP82Q8N141 532 aa13.27□□□□□ -0.29
CNKSR1-202ENST00000374253 PBDC1Q9BVG4 233 aa13.27□□□□□ -0.29
CNKSR1-202ENST00000374253 RPRMQ9NS64 109 aa13.27□□□□□ -0.29
CNKSR1-202ENST00000374253 PUS1Q9Y606 427 aaKnown RBP eCLIP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms