RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 TOX4O94842 621 aa17.84■□□□□ 0.45
HOXA4-201ENST00000360046 ANXA3P12429 323 aa17.84■□□□□ 0.45
HOXA4-201ENST00000360046 ZNF16P17020 682 aaPredicted RBP17.84■□□□□ 0.45
HOXA4-201ENST00000360046 PRRX1P54821 245 aa17.84■□□□□ 0.45
HOXA4-201ENST00000360046 SP6Q3SY56 376 aa17.84■□□□□ 0.45
HOXA4-201ENST00000360046 ZBTB8BQ8NAP8 495 aaPredicted RBP17.84■□□□□ 0.45
HOXA4-201ENST00000360046 MED28Q9H204 178 aa17.84■□□□□ 0.45
HOXA4-201ENST00000360046 PRR13Q9NZ81 148 aa17.84■□□□□ 0.45
HOXA4-201ENST00000360046 M0R1X1 148 aa17.84■□□□□ 0.45
HOXA4-201ENST00000360046 DUS4LO95620 317 aaKnown RBP17.84■□□□□ 0.45
HOXA4-201ENST00000360046 OR5AC1P0C628 307 aa17.84■□□□□ 0.45
HOXA4-201ENST00000360046 KLRD1Q13241 179 aa17.84■□□□□ 0.45
HOXA4-201ENST00000360046 ODF3L1Q8IXM7 274 aa17.84■□□□□ 0.45
HOXA4-201ENST00000360046 LINC00311Q8N616 119 aa17.84■□□□□ 0.45
HOXA4-201ENST00000360046 HEXA-AS1Q9H8Q6 139 aa17.84■□□□□ 0.45
HOXA4-201ENST00000360046 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.83■□□□□ 0.45
HOXA4-201ENST00000360046 CR1P17927 2039 aa17.83■□□□□ 0.45
HOXA4-201ENST00000360046 NOTCH2Q04721 2471 aa17.83■□□□□ 0.45
HOXA4-201ENST00000360046 RNF212BA8MTL3 300 aa17.83■□□□□ 0.44
HOXA4-201ENST00000360046 DCAF12L2Q5VW00 463 aa17.83■□□□□ 0.44
HOXA4-201ENST00000360046 LIN54Q6MZP7 749 aa17.83■□□□□ 0.44
HOXA4-201ENST00000360046 PDZD9Q8IXQ8 264 aa17.83■□□□□ 0.44
HOXA4-201ENST00000360046 C12orf45Q8N5I9 185 aaPredicted RBP17.83■□□□□ 0.44
HOXA4-201ENST00000360046 LINC01356Q8N9X3 169 aa17.83■□□□□ 0.44
HOXA4-201ENST00000360046 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.83■□□□□ 0.44
HOXA4-201ENST00000360046 ZNF596Q8TC21 504 aa17.83■□□□□ 0.44
HOXA4-201ENST00000360046 TNFRSF14Q92956 283 aa17.83■□□□□ 0.44
HOXA4-201ENST00000360046 TP53RKQ96S44 253 aa17.83■□□□□ 0.44
HOXA4-201ENST00000360046 PHB2Q99623 299 aa17.83■□□□□ 0.44
HOXA4-201ENST00000360046 F2RP25116 425 aa17.82■□□□□ 0.44
HOXA4-201ENST00000360046 RRAS2P62070 204 aaPredicted RBP17.82■□□□□ 0.44
HOXA4-201ENST00000360046 MITD1Q8WV92 249 aa17.82■□□□□ 0.44
HOXA4-201ENST00000360046 GALNT14Q96FL9 552 aa17.82■□□□□ 0.44
HOXA4-201ENST00000360046 C1orf159Q96HA4 380 aa17.82■□□□□ 0.44
HOXA4-201ENST00000360046 S1PR3Q99500 378 aa17.82■□□□□ 0.44
HOXA4-201ENST00000360046 UNKLQ9H9P5 680 aaKnown RBP17.82■□□□□ 0.44
HOXA4-201ENST00000360046 SMAD7O15105 426 aaKnown RBP17.81■□□□□ 0.44
HOXA4-201ENST00000360046 MMP9P14780 707 aa17.81■□□□□ 0.44
HOXA4-201ENST00000360046 CATR1Q13166 79 aa17.81■□□□□ 0.44
HOXA4-201ENST00000360046 C1orf229Q6ZS94 237 aaPredicted RBP17.81■□□□□ 0.44
HOXA4-201ENST00000360046 KCTD9Q7L273 389 aa17.81■□□□□ 0.44
HOXA4-201ENST00000360046 TCTEX1D2Q8WW35 142 aa17.81■□□□□ 0.44
HOXA4-201ENST00000360046 HSD17B10Q99714 261 aaKnown RBP17.81■□□□□ 0.44
HOXA4-201ENST00000360046 LIN7CQ9NUP9 197 aaKnown RBP17.81■□□□□ 0.44
HOXA4-201ENST00000360046 GAB2Q9UQC2 676 aa17.81■□□□□ 0.44
HOXA4-201ENST00000360046 PROP1O75360 226 aa17.81■□□□□ 0.44
HOXA4-201ENST00000360046 IGLV1-47P01700 117 aa17.81■□□□□ 0.44
HOXA4-201ENST00000360046 ARG1P05089 322 aa17.81■□□□□ 0.44
HOXA4-201ENST00000360046 HOXB4P17483 251 aaPredicted RBP17.81■□□□□ 0.44
HOXA4-201ENST00000360046 IL3RAP26951 378 aa17.81■□□□□ 0.44
HOXA4-201ENST00000360046 PAX8Q06710 450 aa17.81■□□□□ 0.44
HOXA4-201ENST00000360046 EIF4EBP1Q13541 118 aaPredicted RBP17.81■□□□□ 0.44
HOXA4-201ENST00000360046 TMEM249Q2WGJ8 235 aa17.81■□□□□ 0.44
HOXA4-201ENST00000360046 HLA-DRB5Q30154 266 aa17.81■□□□□ 0.44
HOXA4-201ENST00000360046 ANKRD55Q3KP44 614 aa17.81■□□□□ 0.44
HOXA4-201ENST00000360046 NCR3LG1Q68D85 454 aa17.81■□□□□ 0.44
HOXA4-201ENST00000360046 ZNF66Q6ZN08 573 aa17.81■□□□□ 0.44
HOXA4-201ENST00000360046 BEND2Q8NDZ0 799 aa17.81■□□□□ 0.44
HOXA4-201ENST00000360046 COQ8AQ8NI60 647 aa17.81■□□□□ 0.44
HOXA4-201ENST00000360046 TBX15Q96SF7 602 aa17.81■□□□□ 0.44
HOXA4-201ENST00000360046 HIF1ANQ9NWT6 349 aa17.81■□□□□ 0.44
HOXA4-201ENST00000360046 FLNAP21333 2647 aaKnown RBP17.8■□□□□ 0.44
HOXA4-201ENST00000360046 TRAV20A0A0B4J274 112 aa17.8■□□□□ 0.44
HOXA4-201ENST00000360046 H0Y980 276 aa17.8■□□□□ 0.44
HOXA4-201ENST00000360046 LINC00205P59089 165 aa17.8■□□□□ 0.44
HOXA4-201ENST00000360046 RPL30P62888 115 aaKnown RBP17.8■□□□□ 0.44
HOXA4-201ENST00000360046 TMEM187Q14656 261 aa17.8■□□□□ 0.44
HOXA4-201ENST00000360046 FCN2Q15485 313 aa17.8■□□□□ 0.44
HOXA4-201ENST00000360046 OR2B11Q5JQS5 317 aa17.8■□□□□ 0.44
HOXA4-201ENST00000360046 HCP5Q6MZN7 132 aa17.8■□□□□ 0.44
HOXA4-201ENST00000360046 CIARTQ8N365 385 aaPredicted RBP17.8■□□□□ 0.44
HOXA4-201ENST00000360046 OR11H6Q8NGC7 330 aa17.8■□□□□ 0.44
HOXA4-201ENST00000360046 TMEM186Q96B77 213 aa17.8■□□□□ 0.44
HOXA4-201ENST00000360046 ZNF251Q9BRH9 671 aa17.8■□□□□ 0.44
HOXA4-201ENST00000360046 AKAP9Q99996 3911 aa17.79■□□□□ 0.44
HOXA4-201ENST00000360046 A0A1W2PRD5 423 aa17.79■□□□□ 0.44
HOXA4-201ENST00000360046 A0A1W2PRF3 423 aa17.79■□□□□ 0.44
HOXA4-201ENST00000360046 A0A1W2PRM7 423 aa17.79■□□□□ 0.44
HOXA4-201ENST00000360046 LINC00473A8K010 186 aa17.79■□□□□ 0.44
HOXA4-201ENST00000360046 RNASEK-C17orf49H0YIS7 233 aa17.79■□□□□ 0.44
HOXA4-201ENST00000360046 TGFAP01135 160 aa17.79■□□□□ 0.44
HOXA4-201ENST00000360046 DUTP33316 252 aaKnown RBP17.79■□□□□ 0.44
HOXA4-201ENST00000360046 GLYATL2Q8WU03 294 aa17.79■□□□□ 0.44
HOXA4-201ENST00000360046 LHX4Q969G2 390 aa17.79■□□□□ 0.44
HOXA4-201ENST00000360046 MSI2Q96DH6 328 aaKnown RBP17.79■□□□□ 0.44
HOXA4-201ENST00000360046 TMEM222Q9H0R3 208 aa17.79■□□□□ 0.44
HOXA4-201ENST00000360046 PAIP2BQ9ULR5 123 aaKnown RBP17.79■□□□□ 0.44
HOXA4-201ENST00000360046 AMMECR1Q9Y4X0 333 aaPredicted RBP17.79■□□□□ 0.44
HOXA4-201ENST00000360046 HMX3A6NHT5 357 aa17.78■□□□□ 0.44
HOXA4-201ENST00000360046 IGHV4-31P0DP07 118 aa17.78■□□□□ 0.44
HOXA4-201ENST00000360046 REG1BP48304 166 aa17.78■□□□□ 0.44
HOXA4-201ENST00000360046 EIF2B2P49770 351 aaKnown RBP17.78■□□□□ 0.44
HOXA4-201ENST00000360046 LIAT1Q6ZQX7 453 aa17.78■□□□□ 0.44
HOXA4-201ENST00000360046 ZNF833PQ6ZTB9 187 aa17.78■□□□□ 0.44
HOXA4-201ENST00000360046 OR4P4Q8NGL7 312 aa17.78■□□□□ 0.44
HOXA4-201ENST00000360046 BUB1B-PAK6H3BSN5 160 aa17.78■□□□□ 0.44
HOXA4-201ENST00000360046 SERPINE2P07093 398 aa17.78■□□□□ 0.44
HOXA4-201ENST00000360046 GZMKP49863 264 aa17.78■□□□□ 0.44
HOXA4-201ENST00000360046 C7orf69Q9H7B7 122 aa17.78■□□□□ 0.44
HOXA4-201ENST00000360046 MGAT4CQ9UBM8 478 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms