RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 FBN3Q75N90 2809 aa15.24■□□□□ 0.03
SYNE4-202ENST00000340477 M0R1X1 148 aa15.23■□□□□ 0.03
SYNE4-202ENST00000340477 SSX5O60225 188 aa15.23■□□□□ 0.03
SYNE4-202ENST00000340477 RBBP9O75884 186 aa15.23■□□□□ 0.03
SYNE4-202ENST00000340477 CSF1P09603 554 aa15.23■□□□□ 0.03
SYNE4-202ENST00000340477 CT45A6P0DMU7 189 aa15.23■□□□□ 0.03
SYNE4-202ENST00000340477 CT45A5P0DMU8 189 aa15.23■□□□□ 0.03
SYNE4-202ENST00000340477 CT45A7P0DMV0 189 aa15.23■□□□□ 0.03
SYNE4-202ENST00000340477 TREML4Q6UXN2 200 aa15.23■□□□□ 0.03
SYNE4-202ENST00000340477 H1FOOQ8IZA3 346 aaPredicted RBP15.23■□□□□ 0.03
SYNE4-202ENST00000340477 Q8N9W7 124 aa15.23■□□□□ 0.03
SYNE4-202ENST00000340477 BEST4Q8NFU0 473 aa15.23■□□□□ 0.03
SYNE4-202ENST00000340477 OR5AU1Q8NGC0 362 aa15.23■□□□□ 0.03
SYNE4-202ENST00000340477 CHPT1Q8WUD6 406 aa15.23■□□□□ 0.03
SYNE4-202ENST00000340477 CMTM3Q96MX0 182 aa15.23■□□□□ 0.03
SYNE4-202ENST00000340477 NBR2O15453 112 aa15.22■□□□□ 0.03
SYNE4-202ENST00000340477 APOA1P02647 267 aa15.22■□□□□ 0.03
SYNE4-202ENST00000340477 SOX6P35712 828 aa15.22■□□□□ 0.03
SYNE4-202ENST00000340477 SLC35B1P78383 322 aa15.22■□□□□ 0.03
SYNE4-202ENST00000340477 GLDNQ6ZMI3 551 aaPredicted RBP15.22■□□□□ 0.03
SYNE4-202ENST00000340477 CLVS1Q8IUQ0 354 aaPredicted RBP15.22■□□□□ 0.03
SYNE4-202ENST00000340477 RAB2BQ8WUD1 216 aa15.22■□□□□ 0.03
SYNE4-202ENST00000340477 GON7Q9BXV9 100 aa15.22■□□□□ 0.03
SYNE4-202ENST00000340477 MMP27Q9H306 513 aa15.22■□□□□ 0.03
SYNE4-202ENST00000340477 IGKV1D-8A0A087WSZ0 117 aa15.21■□□□□ 0.03
SYNE4-202ENST00000340477 PSMB11A5LHX3 300 aa15.21■□□□□ 0.03
SYNE4-202ENST00000340477 H0YJW9 148 aa15.21■□□□□ 0.03
SYNE4-202ENST00000340477 AP4M1O00189 453 aa15.21■□□□□ 0.03
SYNE4-202ENST00000340477 IGHG2P01859 326 aa15.21■□□□□ 0.03
SYNE4-202ENST00000340477 OPN1MWP04001 364 aa15.21■□□□□ 0.03
SYNE4-202ENST00000340477 OPN1MW2P0DN77 364 aa15.21■□□□□ 0.03
SYNE4-202ENST00000340477 OPN1MW3P0DN78 364 aa15.21■□□□□ 0.03
SYNE4-202ENST00000340477 CD28P10747 220 aa15.21■□□□□ 0.03
SYNE4-202ENST00000340477 ZNF182P17025 639 aaPredicted RBP15.21■□□□□ 0.03
SYNE4-202ENST00000340477 RPL5P46777 297 aaKnown RBP15.21■□□□□ 0.03
SYNE4-202ENST00000340477 LUMP51884 338 aaPredicted RBP15.21■□□□□ 0.03
SYNE4-202ENST00000340477 TAS2R20P59543 309 aa15.21■□□□□ 0.03
SYNE4-202ENST00000340477 PLGLAQ15195 96 aa15.21■□□□□ 0.03
SYNE4-202ENST00000340477 FAM71E2Q8N5Q1 922 aa15.21■□□□□ 0.03
SYNE4-202ENST00000340477 OR5AN1Q8NGI8 311 aa15.21■□□□□ 0.03
SYNE4-202ENST00000340477 BCL7BQ9BQE9 202 aa15.21■□□□□ 0.03
SYNE4-202ENST00000340477 PLSCR3Q9NRY6 295 aa15.21■□□□□ 0.03
SYNE4-202ENST00000340477 SCOCQ9UIL1 159 aa15.21■□□□□ 0.03
SYNE4-202ENST00000340477 SLC22A5O76082 557 aa15.2■□□□□ 0.02
SYNE4-202ENST00000340477 F2RL1P55085 397 aa15.2■□□□□ 0.02
SYNE4-202ENST00000340477 TAGLNQ01995 201 aaKnown RBP15.2■□□□□ 0.02
SYNE4-202ENST00000340477 KHDC1LQ5JSQ8 128 aa15.2■□□□□ 0.02
SYNE4-202ENST00000340477 HOGA1Q86XE5 327 aa15.2■□□□□ 0.02
SYNE4-202ENST00000340477 NDUFA11Q86Y39 141 aa15.2■□□□□ 0.02
SYNE4-202ENST00000340477 PDPNQ86YL7 162 aa15.2■□□□□ 0.02
SYNE4-202ENST00000340477 DRAXINQ8NBI3 349 aaPredicted RBP15.2■□□□□ 0.02
SYNE4-202ENST00000340477 ADTRPQ96IZ2 230 aa15.2■□□□□ 0.02
SYNE4-202ENST00000340477 RNF5Q99942 180 aa15.2■□□□□ 0.02
SYNE4-202ENST00000340477 NECAP2Q9NVZ3 263 aa15.2■□□□□ 0.02
SYNE4-202ENST00000340477 SDHAF2Q9NX18 166 aa15.2■□□□□ 0.02
SYNE4-202ENST00000340477 ZNF107Q9UII5 783 aaPredicted RBP15.2■□□□□ 0.02
SYNE4-202ENST00000340477 GAB2Q9UQC2 676 aa15.2■□□□□ 0.02
SYNE4-202ENST00000340477 OR2W1Q9Y3N9 320 aa15.2■□□□□ 0.02
SYNE4-202ENST00000340477 FAM25AB3EWG3 89 aa15.19■□□□□ 0.02
SYNE4-202ENST00000340477 FAM25CB3EWG5 89 aa15.19■□□□□ 0.02
SYNE4-202ENST00000340477 FAM25GB3EWG6 89 aa15.19■□□□□ 0.02
SYNE4-202ENST00000340477 EIF4EP06730 217 aaKnown RBP15.19■□□□□ 0.02
SYNE4-202ENST00000340477 NFYAP23511 347 aaPredicted RBP15.19■□□□□ 0.02
SYNE4-202ENST00000340477 PRSS3P35030 304 aa15.19■□□□□ 0.02
SYNE4-202ENST00000340477 THBS3P49746 956 aa15.19■□□□□ 0.02
SYNE4-202ENST00000340477 RTL8BQ17RB0 113 aa15.19■□□□□ 0.02
SYNE4-202ENST00000340477 NSUN5P1Q3KNT7 163 aa15.19■□□□□ 0.02
SYNE4-202ENST00000340477 WIPF2Q8TF74 440 aaPredicted RBP15.19■□□□□ 0.02
SYNE4-202ENST00000340477 TSNAXQ99598 290 aaKnown RBP15.19■□□□□ 0.02
SYNE4-202ENST00000340477 CITED2Q99967 270 aaPredicted RBP15.19■□□□□ 0.02
SYNE4-202ENST00000340477 SLC35D1Q9NTN3 355 aa15.19■□□□□ 0.02
SYNE4-202ENST00000340477 TCRBV4S1A1TA0A5B7 111 aa15.18■□□□□ 0.02
SYNE4-202ENST00000340477 TMBIM6P55061 237 aa15.18■□□□□ 0.02
SYNE4-202ENST00000340477 C5orf64Q2M2E5 130 aa15.18■□□□□ 0.02
SYNE4-202ENST00000340477 STPG2Q8N412 459 aa15.18■□□□□ 0.02
SYNE4-202ENST00000340477 ZNF645Q8N7E2 425 aa15.18■□□□□ 0.02
SYNE4-202ENST00000340477 GVQW1Q8N7I0 195 aa15.18■□□□□ 0.02
SYNE4-202ENST00000340477 NPBQ8NG41 125 aa15.18■□□□□ 0.02
SYNE4-202ENST00000340477 NOL4LQ96MY1 436 aaPredicted RBP15.18■□□□□ 0.02
SYNE4-202ENST00000340477 MRPS7Q9Y2R9 242 aaKnown RBP15.18■□□□□ 0.02
SYNE4-202ENST00000340477 MEIS3P1A6NDR6 274 aa15.17■□□□□ 0.02
SYNE4-202ENST00000340477 J3QRK9 145 aa15.17■□□□□ 0.02
SYNE4-202ENST00000340477 HPGDSO60760 199 aa15.17■□□□□ 0.02
SYNE4-202ENST00000340477 TSPAN15O95858 294 aa15.17■□□□□ 0.02
SYNE4-202ENST00000340477 HLA-DRB1P01911 266 aa15.17■□□□□ 0.02
SYNE4-202ENST00000340477 OR5H8P0DN80 308 aa15.17■□□□□ 0.02
SYNE4-202ENST00000340477 RRASP10301 218 aa15.17■□□□□ 0.02
SYNE4-202ENST00000340477 PTHLHP12272 177 aa15.17■□□□□ 0.02
SYNE4-202ENST00000340477 VDAC1P21796 283 aa15.17■□□□□ 0.02
SYNE4-202ENST00000340477 RPS16P62249 146 aaKnown RBP15.17■□□□□ 0.02
SYNE4-202ENST00000340477 COMMD1Q8N668 190 aa15.17■□□□□ 0.02
SYNE4-202ENST00000340477 ZNF383Q8NA42 475 aa15.17■□□□□ 0.02
SYNE4-202ENST00000340477 OR4F17Q8NGA8 305 aa15.17■□□□□ 0.02
SYNE4-202ENST00000340477 FAM110DQ8TAY7 271 aaPredicted RBP15.17■□□□□ 0.02
SYNE4-202ENST00000340477 FLYWCH2Q96CP2 140 aaKnown RBP15.17■□□□□ 0.02
SYNE4-202ENST00000340477 OR4F4Q96R69 305 aa15.17■□□□□ 0.02
SYNE4-202ENST00000340477 TSSC4Q9Y5U2 329 aaPredicted RBP15.17■□□□□ 0.02
SYNE4-202ENST00000340477 RRHO14718 337 aa15.16■□□□□ 0.02
SYNE4-202ENST00000340477 NDUFA3O95167 84 aa15.16■□□□□ 0.02
SYNE4-202ENST00000340477 SPDEFO95238 335 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms