RNA–Protein interactions for RNA: ENST00000338372.6

VSTM1-201, Transcript of V-set and transmembrane domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSTM1, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-201ENST00000338372 CASTOR1Q8WTX7 329 aa13.17□□□□□ -0.3
VSTM1-201ENST00000338372 UFD1Q92890 307 aa13.17□□□□□ -0.3
VSTM1-201ENST00000338372 ARHGAP5-AS1Q96IT6 56 aa13.17□□□□□ -0.3
VSTM1-201ENST00000338372 OR5B12Q96R08 314 aa13.17□□□□□ -0.3
VSTM1-201ENST00000338372 RNF5Q99942 180 aa13.17□□□□□ -0.3
VSTM1-201ENST00000338372 GHITMQ9H3K2 345 aa13.17□□□□□ -0.3
VSTM1-201ENST00000338372 SCN3BQ9NY72 215 aa13.17□□□□□ -0.3
VSTM1-201ENST00000338372 DNAH7Q8WXX0 4024 aa13.16□□□□□ -0.3
VSTM1-201ENST00000338372 ARSBP15848 533 aa13.16□□□□□ -0.3
VSTM1-201ENST00000338372 CRHBPP24387 322 aa13.16□□□□□ -0.3
VSTM1-201ENST00000338372 MC5RP33032 325 aa13.16□□□□□ -0.3
VSTM1-201ENST00000338372 VEGFCP49767 419 aa13.16□□□□□ -0.3
VSTM1-201ENST00000338372 CLDN12P56749 244 aa13.16□□□□□ -0.3
VSTM1-201ENST00000338372 MLLT11Q13015 90 aaPredicted RBP13.16□□□□□ -0.3
VSTM1-201ENST00000338372 PSG5Q15238 335 aa13.16□□□□□ -0.3
VSTM1-201ENST00000338372 C2orf76Q3KRA6 126 aa13.16□□□□□ -0.3
VSTM1-201ENST00000338372 DLX4Q92988 240 aaPredicted RBP13.16□□□□□ -0.3
VSTM1-201ENST00000338372 C5orf30Q96GV9 206 aa13.16□□□□□ -0.3
VSTM1-201ENST00000338372 RBBP9O75884 186 aa13.15□□□□□ -0.3
VSTM1-201ENST00000338372 IGKV1-16P04430 117 aa13.15□□□□□ -0.3
VSTM1-201ENST00000338372 MAP2K4P45985 399 aa13.15□□□□□ -0.3
VSTM1-201ENST00000338372 INSL3P51460 131 aa13.15□□□□□ -0.3
VSTM1-201ENST00000338372 SSX1Q16384 188 aa13.15□□□□□ -0.3
VSTM1-201ENST00000338372 AKIRIN2Q53H80 203 aa13.15□□□□□ -0.3
VSTM1-201ENST00000338372 TMEM65Q6PI78 240 aa13.15□□□□□ -0.3
VSTM1-201ENST00000338372 ZNF562Q6V9R5 426 aa13.15□□□□□ -0.3
VSTM1-201ENST00000338372 DRAXINQ8NBI3 349 aaPredicted RBP13.15□□□□□ -0.3
VSTM1-201ENST00000338372 SETD6Q8TBK2 473 aa13.15□□□□□ -0.3
VSTM1-201ENST00000338372 FAM3DQ96BQ1 224 aa13.15□□□□□ -0.3
VSTM1-201ENST00000338372 URM1Q9BTM9 101 aaKnown RBP13.15□□□□□ -0.3
VSTM1-201ENST00000338372 CHMP1AQ9HD42 196 aaPredicted RBP13.15□□□□□ -0.3
VSTM1-201ENST00000338372 KIAA1456Q9P272 454 aa13.15□□□□□ -0.3
VSTM1-201ENST00000338372 RNF150Q9ULK6 438 aa13.15□□□□□ -0.3
VSTM1-201ENST00000338372 ZNF256Q9Y2P7 627 aaPredicted RBP13.15□□□□□ -0.3
VSTM1-201ENST00000338372 WASHC3Q9Y3C0 194 aa13.15□□□□□ -0.3
VSTM1-201ENST00000338372 TPRKBQ9Y3C4 175 aa13.15□□□□□ -0.3
VSTM1-201ENST00000338372 IGHV4OR15-8A0A075B7B6 117 aa13.14□□□□□ -0.31
VSTM1-201ENST00000338372 A0A087WW49 117 aa13.14□□□□□ -0.31
VSTM1-201ENST00000338372 TMEM272A0A1B0GTI8 110 aa13.14□□□□□ -0.31
VSTM1-201ENST00000338372 A0A1W2PN81 502 aa13.14□□□□□ -0.31
VSTM1-201ENST00000338372 ARPC1BO15143 372 aaKnown RBP13.14□□□□□ -0.31
VSTM1-201ENST00000338372 RGS10O43665 173 aa13.14□□□□□ -0.31
VSTM1-201ENST00000338372 IGLV2-23P01705 113 aa13.14□□□□□ -0.31
VSTM1-201ENST00000338372 CRYGBP07316 175 aa13.14□□□□□ -0.31
VSTM1-201ENST00000338372 LGALS1P09382 135 aaKnown RBP13.14□□□□□ -0.31
VSTM1-201ENST00000338372 ZBTB25P24278 435 aa13.14□□□□□ -0.31
VSTM1-201ENST00000338372 CHRNA7P36544 502 aa13.14□□□□□ -0.31
VSTM1-201ENST00000338372 SLURP1P55000 103 aa13.14□□□□□ -0.31
VSTM1-201ENST00000338372 TRAM1Q15629 374 aa13.14□□□□□ -0.31
VSTM1-201ENST00000338372 ECSCRQ19T08 205 aa13.14□□□□□ -0.31
VSTM1-201ENST00000338372 MRGPRG-AS1Q2M3A8 158 aa13.14□□□□□ -0.31
VSTM1-201ENST00000338372 MOGAT2Q3SYC2 334 aa13.14□□□□□ -0.31
VSTM1-201ENST00000338372 PRSS48Q7RTY5 328 aa13.14□□□□□ -0.31
VSTM1-201ENST00000338372 RHOVQ96L33 236 aa13.14□□□□□ -0.31
VSTM1-201ENST00000338372 MGLLQ99685 303 aa13.14□□□□□ -0.31
VSTM1-201ENST00000338372 FAM103A1Q9BTL3 118 aaKnown RBP13.14□□□□□ -0.31
VSTM1-201ENST00000338372 VCXQ9H320 206 aa13.14□□□□□ -0.31
VSTM1-201ENST00000338372 FOXA2Q9Y261 457 aaPredicted RBP13.14□□□□□ -0.31
VSTM1-201ENST00000338372 U3KQK5 164 aa13.14□□□□□ -0.31
VSTM1-201ENST00000338372 OVOL1O14753 267 aa13.13□□□□□ -0.31
VSTM1-201ENST00000338372 RAB11BQ15907 218 aa13.13□□□□□ -0.31
VSTM1-201ENST00000338372 ACSM6Q6P461 480 aa13.13□□□□□ -0.31
VSTM1-201ENST00000338372 ZNF429Q86V71 674 aa13.13□□□□□ -0.31
VSTM1-201ENST00000338372 TCTEX1D1Q8N7M0 179 aa13.13□□□□□ -0.31
VSTM1-201ENST00000338372 EDARADDQ8WWZ3 215 aa13.13□□□□□ -0.31
VSTM1-201ENST00000338372 PLGRKTQ9HBL7 147 aa13.13□□□□□ -0.31
VSTM1-201ENST00000338372 C12orf4Q9NQ89 552 aa13.13□□□□□ -0.31
VSTM1-201ENST00000338372 MGAT4AQ9UM21 535 aa13.13□□□□□ -0.31
VSTM1-201ENST00000338372 TRDCB7Z8K6 153 aa13.12□□□□□ -0.31
VSTM1-201ENST00000338372 ARL6IP5O75915 188 aa13.12□□□□□ -0.31
VSTM1-201ENST00000338372 CD3GP09693 182 aa13.12□□□□□ -0.31
VSTM1-201ENST00000338372 HSMCR30P0CW71 290 aa13.12□□□□□ -0.31
VSTM1-201ENST00000338372 PSMA1P25786 263 aaKnown RBP13.12□□□□□ -0.31
VSTM1-201ENST00000338372 CALRP27797 417 aaKnown RBP13.12□□□□□ -0.31
VSTM1-201ENST00000338372 PPP1R27Q86WC6 154 aa13.12□□□□□ -0.31
VSTM1-201ENST00000338372 LFNGQ8NES3 379 aa13.12□□□□□ -0.31
VSTM1-201ENST00000338372 CMSS1Q9BQ75 279 aaKnown RBP13.12□□□□□ -0.31
VSTM1-201ENST00000338372 CABLES2Q9BTV7 478 aa13.12□□□□□ -0.31
VSTM1-201ENST00000338372 RDH8Q9NYR8 311 aa13.12□□□□□ -0.31
VSTM1-201ENST00000338372 METTL1Q9UBP6 276 aaKnown RBP13.12□□□□□ -0.31
VSTM1-201ENST00000338372 V9GY05 133 aa13.12□□□□□ -0.31
VSTM1-201ENST00000338372 LINC01619G3V211 115 aa13.11□□□□□ -0.31
VSTM1-201ENST00000338372 RAB27BO00194 218 aa13.11□□□□□ -0.31
VSTM1-201ENST00000338372 CA2P00918 260 aa13.11□□□□□ -0.31
VSTM1-201ENST00000338372 GSTP1P09211 210 aaKnown RBP13.11□□□□□ -0.31
VSTM1-201ENST00000338372 NR2C2APQ86WQ0 139 aa13.11□□□□□ -0.31
VSTM1-201ENST00000338372 OR56B1Q8NGI3 324 aa13.11□□□□□ -0.31
VSTM1-201ENST00000338372 CLCC1Q96S66 551 aa13.11□□□□□ -0.31
VSTM1-201ENST00000338372 ASCL2Q99929 193 aa13.11□□□□□ -0.31
VSTM1-201ENST00000338372 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.11□□□□□ -0.31
VSTM1-201ENST00000338372 RAB22AQ9UL26 194 aa13.11□□□□□ -0.31
VSTM1-201ENST00000338372 A3GALT2U3KPV4 340 aa13.11□□□□□ -0.31
VSTM1-201ENST00000338372 TRBV6-7A0A0A0MS04 114 aa13.1□□□□□ -0.31
VSTM1-201ENST00000338372 TRAV1-2A0A0B4J238 106 aa13.1□□□□□ -0.31
VSTM1-201ENST00000338372 SRRM4A7MD48 611 aaKnown RBP13.1□□□□□ -0.31
VSTM1-201ENST00000338372 H7C2Y5 167 aa13.1□□□□□ -0.31
VSTM1-201ENST00000338372 MFNGO00587 321 aa13.1□□□□□ -0.31
VSTM1-201ENST00000338372 DENRO43583 198 aaKnown RBP13.1□□□□□ -0.31
VSTM1-201ENST00000338372 SPDEFO95238 335 aa13.1□□□□□ -0.31
VSTM1-201ENST00000338372 TFAP2AP05549 437 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms