RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 WASHC3Q9Y3C0 194 aa13.83□□□□□ -0.2
HDDC3-201ENST00000330334 TMEM272A0A1B0GTI8 110 aa13.82□□□□□ -0.2
HDDC3-201ENST00000330334 TRDCB7Z8K6 153 aa13.82□□□□□ -0.2
HDDC3-201ENST00000330334 I3L521 148 aa13.82□□□□□ -0.2
HDDC3-201ENST00000330334 PDCD5O14737 125 aa13.82□□□□□ -0.2
HDDC3-201ENST00000330334 PROP1O75360 226 aa13.82□□□□□ -0.2
HDDC3-201ENST00000330334 DIRAS3O95661 229 aa13.82□□□□□ -0.2
HDDC3-201ENST00000330334 SERPINB10P48595 397 aa13.82□□□□□ -0.2
HDDC3-201ENST00000330334 RAB9AP51151 201 aa13.82□□□□□ -0.2
HDDC3-201ENST00000330334 SSX1Q16384 188 aa13.82□□□□□ -0.2
HDDC3-201ENST00000330334 C19orf54Q5BKX5 351 aa13.82□□□□□ -0.2
HDDC3-201ENST00000330334 C9orf66Q5T8R8 295 aa13.82□□□□□ -0.2
HDDC3-201ENST00000330334 TCTEX1D1Q8N7M0 179 aa13.82□□□□□ -0.2
HDDC3-201ENST00000330334 CNBD2Q96M20 576 aa13.82□□□□□ -0.2
HDDC3-201ENST00000330334 PARP11Q9NR21 331 aa13.82□□□□□ -0.2
HDDC3-201ENST00000330334 NDUFB11Q9NX14 153 aa13.82□□□□□ -0.2
HDDC3-201ENST00000330334 KCNK7Q9Y2U2 307 aa13.82□□□□□ -0.2
HDDC3-201ENST00000330334 DNAH9Q9NYC9 4486 aa13.82□□□□□ -0.2
HDDC3-201ENST00000330334 IGKV1-6A0A0C4DH72 117 aa13.81□□□□□ -0.2
HDDC3-201ENST00000330334 TRDV1A0A1B0GX56 115 aa13.81□□□□□ -0.2
HDDC3-201ENST00000330334 IFITM5A6NNB3 132 aa13.81□□□□□ -0.2
HDDC3-201ENST00000330334 GSTP1P09211 210 aaKnown RBP13.81□□□□□ -0.2
HDDC3-201ENST00000330334 RAB25P57735 213 aa13.81□□□□□ -0.2
HDDC3-201ENST00000330334 CX3CL1P78423 397 aa13.81□□□□□ -0.2
HDDC3-201ENST00000330334 TMEM267Q0VDI3 215 aaPredicted RBP13.81□□□□□ -0.2
HDDC3-201ENST00000330334 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.81□□□□□ -0.2
HDDC3-201ENST00000330334 OR11H1Q8NG94 326 aa13.81□□□□□ -0.2
HDDC3-201ENST00000330334 OR4A4PQ8NGN8 299 aa13.81□□□□□ -0.2
HDDC3-201ENST00000330334 ZNF221Q9UK13 617 aa13.81□□□□□ -0.2
HDDC3-201ENST00000330334 GAB2Q9UQC2 676 aa13.81□□□□□ -0.2
HDDC3-201ENST00000330334 NUBP2Q9Y5Y2 271 aa13.81□□□□□ -0.2
HDDC3-201ENST00000330334 H7C2Y5 167 aa13.8□□□□□ -0.2
HDDC3-201ENST00000330334 OR8U8P0C7N1 319 aa13.8□□□□□ -0.2
HDDC3-201ENST00000330334 RAB6AP20340 208 aa13.8□□□□□ -0.2
HDDC3-201ENST00000330334 ZNF562Q6V9R5 426 aa13.8□□□□□ -0.2
HDDC3-201ENST00000330334 OR1N2Q8NGR9 330 aa13.8□□□□□ -0.2
HDDC3-201ENST00000330334 RAB3CQ96E17 227 aa13.8□□□□□ -0.2
HDDC3-201ENST00000330334 B9D2Q9BPU9 175 aa13.8□□□□□ -0.2
HDDC3-201ENST00000330334 CENPOQ9BU64 300 aa13.8□□□□□ -0.2
HDDC3-201ENST00000330334 FBXL15Q9H469 300 aa13.8□□□□□ -0.2
HDDC3-201ENST00000330334 SCOCQ9UIL1 159 aa13.8□□□□□ -0.2
HDDC3-201ENST00000330334 FCN1O00602 326 aa13.79□□□□□ -0.2
HDDC3-201ENST00000330334 SPDEFO95238 335 aa13.79□□□□□ -0.2
HDDC3-201ENST00000330334 CD3GP09693 182 aa13.79□□□□□ -0.2
HDDC3-201ENST00000330334 EGR2P11161 476 aaPredicted RBP13.79□□□□□ -0.2
HDDC3-201ENST00000330334 INSL3P51460 131 aa13.79□□□□□ -0.2
HDDC3-201ENST00000330334 MRPS15P82914 257 aaKnown RBP13.79□□□□□ -0.2
HDDC3-201ENST00000330334 NDPQ00604 133 aa13.79□□□□□ -0.2
HDDC3-201ENST00000330334 SRSF7Q16629 238 aaKnown RBP eCLIP13.79□□□□□ -0.2
HDDC3-201ENST00000330334 AKIRIN2Q53H80 203 aa13.79□□□□□ -0.2
HDDC3-201ENST00000330334 VAX1Q5SQQ9 334 aa13.79□□□□□ -0.2
HDDC3-201ENST00000330334 HES5Q5TA89 166 aa13.79□□□□□ -0.2
HDDC3-201ENST00000330334 PYHIN1Q6K0P9 492 aa13.79□□□□□ -0.2
HDDC3-201ENST00000330334 GLDNQ6ZMI3 551 aaPredicted RBP13.79□□□□□ -0.2
HDDC3-201ENST00000330334 OR10R2Q8NGX6 335 aa13.79□□□□□ -0.2
HDDC3-201ENST00000330334 TSNAXQ99598 290 aaKnown RBP13.79□□□□□ -0.2
HDDC3-201ENST00000330334 GNB4Q9HAV0 340 aa13.79□□□□□ -0.2
HDDC3-201ENST00000330334 RDH8Q9NYR8 311 aa13.79□□□□□ -0.2
HDDC3-201ENST00000330334 RNF150Q9ULK6 438 aa13.79□□□□□ -0.2
HDDC3-201ENST00000330334 FOXA2Q9Y261 457 aaPredicted RBP13.79□□□□□ -0.2
HDDC3-201ENST00000330334 SHISA3A0PJX4 238 aa13.78□□□□□ -0.2
HDDC3-201ENST00000330334 SEC14L6B5MCN3 397 aa13.78□□□□□ -0.2
HDDC3-201ENST00000330334 RAB27BO00194 218 aa13.78□□□□□ -0.2
HDDC3-201ENST00000330334 FABP7O15540 132 aa13.78□□□□□ -0.2
HDDC3-201ENST00000330334 TFAP2AP05549 437 aa13.78□□□□□ -0.2
HDDC3-201ENST00000330334 GADD45AP24522 165 aa13.78□□□□□ -0.2
HDDC3-201ENST00000330334 MYL9P24844 172 aa13.78□□□□□ -0.2
HDDC3-201ENST00000330334 LUMP51884 338 aaPredicted RBP13.78□□□□□ -0.2
HDDC3-201ENST00000330334 GABARAPL2P60520 117 aa13.78□□□□□ -0.2
HDDC3-201ENST00000330334 ZNF616Q08AN1 781 aa13.78□□□□□ -0.2
HDDC3-201ENST00000330334 PLA2G7Q13093 441 aa13.78□□□□□ -0.2
HDDC3-201ENST00000330334 PLGLAQ15195 96 aa13.78□□□□□ -0.2
HDDC3-201ENST00000330334 PSG5Q15238 335 aa13.78□□□□□ -0.2
HDDC3-201ENST00000330334 PDPNQ86YL7 162 aa13.78□□□□□ -0.2
HDDC3-201ENST00000330334 ZNF383Q8NA42 475 aa13.78□□□□□ -0.2
HDDC3-201ENST00000330334 CABLES2Q9BTV7 478 aa13.78□□□□□ -0.2
HDDC3-201ENST00000330334 FBXO7Q9Y3I1 522 aa13.78□□□□□ -0.2
HDDC3-201ENST00000330334 TRBV6-7A0A0A0MS04 114 aa13.77□□□□□ -0.21
HDDC3-201ENST00000330334 METTL21EPA6NDL7 271 aa13.77□□□□□ -0.21
HDDC3-201ENST00000330334 SOX15O60248 233 aa13.77□□□□□ -0.21
HDDC3-201ENST00000330334 IGKV1-16P04430 117 aa13.77□□□□□ -0.21
HDDC3-201ENST00000330334 FCGR3AP08637 254 aa13.77□□□□□ -0.21
HDDC3-201ENST00000330334 RAB3BP20337 219 aa13.77□□□□□ -0.21
HDDC3-201ENST00000330334 OR10A3P58181 314 aa13.77□□□□□ -0.21
HDDC3-201ENST00000330334 TAGLNQ01995 201 aaKnown RBP13.77□□□□□ -0.21
HDDC3-201ENST00000330334 UBE2UQ5VVX9 321 aa13.77□□□□□ -0.21
HDDC3-201ENST00000330334 Q6ZS49 121 aa13.77□□□□□ -0.21
HDDC3-201ENST00000330334 DRAXINQ8NBI3 349 aaPredicted RBP13.77□□□□□ -0.21
HDDC3-201ENST00000330334 METTL1Q9UBP6 276 aaKnown RBP13.77□□□□□ -0.21
HDDC3-201ENST00000330334 TENM3Q9P273 2699 aa13.76□□□□□ -0.21
HDDC3-201ENST00000330334 A0A1W2PN81 502 aa13.76□□□□□ -0.21
HDDC3-201ENST00000330334 MFNGO00587 321 aa13.76□□□□□ -0.21
HDDC3-201ENST00000330334 APOA2P02652 100 aa13.76□□□□□ -0.21
HDDC3-201ENST00000330334 HIST1H1DP16402 221 aaKnown RBP13.76□□□□□ -0.21
HDDC3-201ENST00000330334 CHRNA7P36544 502 aa13.76□□□□□ -0.21
HDDC3-201ENST00000330334 LGALS7P47929 136 aa13.76□□□□□ -0.21
HDDC3-201ENST00000330334 RPS16P62249 146 aaKnown RBP13.76□□□□□ -0.21
HDDC3-201ENST00000330334 GNB1P62873 340 aa13.76□□□□□ -0.21
HDDC3-201ENST00000330334 CD69Q07108 199 aa13.76□□□□□ -0.21
HDDC3-201ENST00000330334 ARL6IP1Q15041 203 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms