RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 CD3DP04234 171 aa4.2□□□□□ -1.74
LRIT3-201ENST00000327908 HLA-DMAP28067 261 aa4.2□□□□□ -1.74
LRIT3-201ENST00000327908 CHRNA7P36544 502 aa4.2□□□□□ -1.74
LRIT3-201ENST00000327908 UBE2KP61086 200 aa4.2□□□□□ -1.74
LRIT3-201ENST00000327908 BAMBIQ13145 260 aa4.2□□□□□ -1.74
LRIT3-201ENST00000327908 SSX2Q16385 188 aa4.2□□□□□ -1.74
LRIT3-201ENST00000327908 FOXRED2Q8IWF2 684 aa4.2□□□□□ -1.74
LRIT3-201ENST00000327908 BATF2Q8N1L9 274 aa4.2□□□□□ -1.74
LRIT3-201ENST00000327908 PRR18Q8N4B5 295 aa4.2□□□□□ -1.74
LRIT3-201ENST00000327908 DUSP18Q8NEJ0 188 aa4.2□□□□□ -1.74
LRIT3-201ENST00000327908 OR4F5Q8NH21 305 aa4.2□□□□□ -1.74
LRIT3-201ENST00000327908 RNASE11Q8TAA1 199 aaKnown RBP4.2□□□□□ -1.74
LRIT3-201ENST00000327908 ST6GALNAC6Q969X2 333 aa4.2□□□□□ -1.74
LRIT3-201ENST00000327908 RRNAD1Q96FB5 475 aaKnown RBP4.2□□□□□ -1.74
LRIT3-201ENST00000327908 ATP6V0BQ99437 205 aa4.2□□□□□ -1.74
LRIT3-201ENST00000327908 RASL11BQ9BPW5 248 aa4.2□□□□□ -1.74
LRIT3-201ENST00000327908 PDCD10Q9BUL8 212 aa4.2□□□□□ -1.74
LRIT3-201ENST00000327908 FXYD6Q9H0Q3 95 aa4.2□□□□□ -1.74
LRIT3-201ENST00000327908 TCF19Q9Y242 345 aa4.2□□□□□ -1.74
LRIT3-201ENST00000327908 RNASE1P07998 156 aaKnown RBP4.19□□□□□ -1.74
LRIT3-201ENST00000327908 H2AFB2P0C5Z0 115 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 OR8U9P0C7N5 309 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 HIST1H1BP16401 226 aaKnown RBP4.19□□□□□ -1.74
LRIT3-201ENST00000327908 TMEM11P17152 192 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 GNG10P50151 68 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 HILS1P60008 231 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 SLC35B1P78383 322 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 SCGB2B2Q4G0G5 96 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 CT45A1Q5HYN5 189 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 C11orf42Q8N5U0 333 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 NPBQ8NG41 125 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 OR8U1Q8NH10 309 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 CT45A3Q8NHU0 189 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 PHB2Q99623 299 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 HDHD3Q9BSH5 251 aaPredicted RBP4.19□□□□□ -1.74
LRIT3-201ENST00000327908 SIRT7Q9NRC8 400 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 GAR1Q9NY12 217 aaKnown RBP4.19□□□□□ -1.74
LRIT3-201ENST00000327908 BET1LQ9NYM9 111 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 GPR132Q9UNW8 380 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 TMED3Q9Y3Q3 217 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 MMP24Q9Y5R2 645 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 NBASA2RRP1 2371 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 MPPED1O15442 326 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 ACTL6BO94805 426 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 SNRNP70P08621 437 aaKnown RBP4.19□□□□□ -1.74
LRIT3-201ENST00000327908 DRAM1Q8N682 238 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 LRTM2Q8N967 370 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 RFESDQ8TAC1 157 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 RBM14Q96PK6 669 aaKnown RBP4.19□□□□□ -1.74
LRIT3-201ENST00000327908 CIB3Q96Q77 187 aaPredicted RBP4.19□□□□□ -1.74
LRIT3-201ENST00000327908 ENY2Q9NPA8 101 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 ING3Q9NXR8 418 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 COA4Q9NYJ1 87 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 ZFYVE26Q68DK2 2539 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 SAA2-SAA4A0A096LPE2 208 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 CRYM-AS1A6NIL9 109 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 BRI3O95415 125 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 PET100P0DJ07 73 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 SAA2P0DJI9 122 aaPredicted RBP4.19□□□□□ -1.74
LRIT3-201ENST00000327908 UCP1P25874 307 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 DUTP33316 252 aaKnown RBP4.19□□□□□ -1.74
LRIT3-201ENST00000327908 CCR6P51684 374 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 SUB1P53999 127 aaKnown RBP eCLIP4.19□□□□□ -1.74
LRIT3-201ENST00000327908 KRTAP1-1Q07627 177 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 PLA2G7Q13093 441 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 HCP5Q6MZN7 132 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 LYSMD2Q8IV50 215 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 ZNF695Q8IW36 515 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 TPRX1Q8N7U7 411 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 OR13C8Q8NGS7 320 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 TMEM56Q96MV1 263 aa4.19□□□□□ -1.74
LRIT3-201ENST00000327908 A0A1B0GW55 424 aa4.18□□□□□ -1.74
LRIT3-201ENST00000327908 A6NDX4 124 aa4.18□□□□□ -1.74
LRIT3-201ENST00000327908 H7C2Y5 167 aa4.18□□□□□ -1.74
LRIT3-201ENST00000327908 SHOXO15266 292 aa4.18□□□□□ -1.74
LRIT3-201ENST00000327908 NBR2O15453 112 aa4.18□□□□□ -1.74
LRIT3-201ENST00000327908 SFT2D2O95562 160 aa4.18□□□□□ -1.74
LRIT3-201ENST00000327908 CDS2O95674 445 aa4.18□□□□□ -1.74
LRIT3-201ENST00000327908 DUX4L2P0CJ85 424 aa4.18□□□□□ -1.74
LRIT3-201ENST00000327908 DUX4L3P0CJ86 424 aa4.18□□□□□ -1.74
LRIT3-201ENST00000327908 DUX4L4P0CJ87 422 aa4.18□□□□□ -1.74
LRIT3-201ENST00000327908 DUX4L5P0CJ88 424 aa4.18□□□□□ -1.74
LRIT3-201ENST00000327908 DUX4L6P0CJ89 424 aa4.18□□□□□ -1.74
LRIT3-201ENST00000327908 DUX4L7P0CJ90 424 aa4.18□□□□□ -1.74
LRIT3-201ENST00000327908 FXYD4P59646 89 aa4.18□□□□□ -1.74
LRIT3-201ENST00000327908 IGSF11Q5DX21 431 aa4.18□□□□□ -1.74
LRIT3-201ENST00000327908 DUX4L9Q6RFH8 374 aaPredicted RBP4.18□□□□□ -1.74
LRIT3-201ENST00000327908 LYG2Q86SG7 212 aa4.18□□□□□ -1.74
LRIT3-201ENST00000327908 OR51S1Q8NGJ8 323 aa4.18□□□□□ -1.74
LRIT3-201ENST00000327908 SLC6A7Q99884 636 aa4.18□□□□□ -1.74
LRIT3-201ENST00000327908 SDHAF2Q9NX18 166 aa4.18□□□□□ -1.74
LRIT3-201ENST00000327908 OR1A1Q9P1Q5 309 aa4.18□□□□□ -1.74
LRIT3-201ENST00000327908 DUX4Q9UBX2 424 aa4.18□□□□□ -1.74
LRIT3-201ENST00000327908 KLK11Q9UBX7 282 aa4.18□□□□□ -1.74
LRIT3-201ENST00000327908 ZNF257Q9Y2Q1 563 aa4.18□□□□□ -1.74
LRIT3-201ENST00000327908 C3orf85A0A1B0GTC6 90 aa4.18□□□□□ -1.74
LRIT3-201ENST00000327908 H0YJW9 148 aa4.18□□□□□ -1.74
LRIT3-201ENST00000327908 CORTO00230 105 aa4.18□□□□□ -1.74
LRIT3-201ENST00000327908 NDUFA3O95167 84 aa4.18□□□□□ -1.74
LRIT3-201ENST00000327908 HLA-DRB1P01911 266 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 160.7 ms