RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 FAM90A9PA6NNJ1 464 aa16.09■□□□□ 0.17
HOXC4-201ENST00000303406 RAMP3O60896 148 aa16.09■□□□□ 0.17
HOXC4-201ENST00000303406 CD3EP07766 207 aa16.09■□□□□ 0.17
HOXC4-201ENST00000303406 KIR2DS2P43631 304 aa16.09■□□□□ 0.17
HOXC4-201ENST00000303406 DYNLT3P51808 116 aa16.09■□□□□ 0.17
HOXC4-201ENST00000303406 Q6ZRG5 221 aa16.09■□□□□ 0.17
HOXC4-201ENST00000303406 OR10A7Q8NGE5 316 aa16.09■□□□□ 0.17
HOXC4-201ENST00000303406 OR5C1Q8NGR4 320 aa16.09■□□□□ 0.17
HOXC4-201ENST00000303406 GNPNAT1Q96EK6 184 aaPredicted RBP16.09■□□□□ 0.17
HOXC4-201ENST00000303406 LRRC46Q96FV0 321 aa16.09■□□□□ 0.17
HOXC4-201ENST00000303406 ATP5SQ99766 215 aa16.09■□□□□ 0.17
HOXC4-201ENST00000303406 MS4A5Q9H3V2 200 aa16.09■□□□□ 0.17
HOXC4-201ENST00000303406 SAP30LQ9HAJ7 183 aa16.09■□□□□ 0.17
HOXC4-201ENST00000303406 CACFD1Q9UGQ2 172 aa16.09■□□□□ 0.17
HOXC4-201ENST00000303406 NDRG3Q9UGV2 375 aa16.09■□□□□ 0.17
HOXC4-201ENST00000303406 MGAQ8IWI9 3026 aa16.09■□□□□ 0.17
HOXC4-201ENST00000303406 UMAD1C9J7I0 102 aa16.09■□□□□ 0.17
HOXC4-201ENST00000303406 E7EQL1 145 aa16.09■□□□□ 0.17
HOXC4-201ENST00000303406 S1PR2O95136 353 aa16.09■□□□□ 0.17
HOXC4-201ENST00000303406 SFTPCP11686 197 aa16.09■□□□□ 0.17
HOXC4-201ENST00000303406 APOBEC3AP31941 199 aaPredicted RBP16.09■□□□□ 0.17
HOXC4-201ENST00000303406 CCL8P80075 99 aa16.09■□□□□ 0.17
HOXC4-201ENST00000303406 MEF2CQ06413 473 aaPredicted RBP16.09■□□□□ 0.17
HOXC4-201ENST00000303406 PLPPR2Q96GM1 343 aa16.09■□□□□ 0.17
HOXC4-201ENST00000303406 CCL13Q99616 98 aa16.09■□□□□ 0.17
HOXC4-201ENST00000303406 IFI27L2Q9H2X8 130 aa16.09■□□□□ 0.17
HOXC4-201ENST00000303406 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.09■□□□□ 0.17
HOXC4-201ENST00000303406 DYSFO75923 2080 aa16.08■□□□□ 0.16
HOXC4-201ENST00000303406 TMEM218A2RU14 115 aa16.08■□□□□ 0.16
HOXC4-201ENST00000303406 LINC00473A8K010 186 aa16.08■□□□□ 0.16
HOXC4-201ENST00000303406 DEFB108AA8MXU0 73 aa16.08■□□□□ 0.16
HOXC4-201ENST00000303406 B9A039 149 aa16.08■□□□□ 0.16
HOXC4-201ENST00000303406 TMEM178BH3BS89 294 aa16.08■□□□□ 0.16
HOXC4-201ENST00000303406 GYPAP02724 150 aa16.08■□□□□ 0.16
HOXC4-201ENST00000303406 ZNF816Q0VGE8 651 aaPredicted RBP16.08■□□□□ 0.16
HOXC4-201ENST00000303406 IZUMO4Q1ZYL8 232 aa16.08■□□□□ 0.16
HOXC4-201ENST00000303406 BTNL3Q6UXE8 466 aa16.08■□□□□ 0.16
HOXC4-201ENST00000303406 IDI2-AS1Q9NZ38 188 aa16.08■□□□□ 0.16
HOXC4-201ENST00000303406 PSENENQ9NZ42 101 aa16.08■□□□□ 0.16
HOXC4-201ENST00000303406 COQ3Q9NZJ6 369 aa16.08■□□□□ 0.16
HOXC4-201ENST00000303406 PPIAL4EA0A075B759 164 aa16.07■□□□□ 0.16
HOXC4-201ENST00000303406 hADV38S2A0JD32 116 aa16.07■□□□□ 0.16
HOXC4-201ENST00000303406 PPIAL4DF5H284 164 aa16.07■□□□□ 0.16
HOXC4-201ENST00000303406 CCL21O00585 134 aa16.07■□□□□ 0.16
HOXC4-201ENST00000303406 LY86O95711 162 aa16.07■□□□□ 0.16
HOXC4-201ENST00000303406 HPRT1P00492 218 aa16.07■□□□□ 0.16
HOXC4-201ENST00000303406 PPIAL4FP0DN26 164 aa16.07■□□□□ 0.16
HOXC4-201ENST00000303406 SELLP14151 372 aa16.07■□□□□ 0.16
HOXC4-201ENST00000303406 UBE2KP61086 200 aa16.07■□□□□ 0.16
HOXC4-201ENST00000303406 TNFRSF9Q07011 255 aa16.07■□□□□ 0.16
HOXC4-201ENST00000303406 CLINT1Q14677 625 aa16.07■□□□□ 0.16
HOXC4-201ENST00000303406 AARDQ4LEZ3 155 aa16.07■□□□□ 0.16
HOXC4-201ENST00000303406 TCF23Q7RTU1 214 aa16.07■□□□□ 0.16
HOXC4-201ENST00000303406 HSD17B11Q8NBQ5 300 aa16.07■□□□□ 0.16
HOXC4-201ENST00000303406 DEFB108BQ8NET1 73 aa16.07■□□□□ 0.16
HOXC4-201ENST00000303406 ABHD14AQ9BUJ0 271 aa16.07■□□□□ 0.16
HOXC4-201ENST00000303406 HRH4Q9H3N8 390 aa16.07■□□□□ 0.16
HOXC4-201ENST00000303406 KCNJ16Q9NPI9 418 aa16.07■□□□□ 0.16
HOXC4-201ENST00000303406 PPIAL4AQ9Y536 164 aa16.07■□□□□ 0.16
HOXC4-201ENST00000303406 LINC00312Q9Y6C7 94 aa16.07■□□□□ 0.16
HOXC4-201ENST00000303406 DSCAMO60469 2012 aa16.07■□□□□ 0.16
HOXC4-201ENST00000303406 PROP1O75360 226 aa16.06■□□□□ 0.16
HOXC4-201ENST00000303406 CST7O76096 145 aa16.06■□□□□ 0.16
HOXC4-201ENST00000303406 NXPH3O95157 252 aa16.06■□□□□ 0.16
HOXC4-201ENST00000303406 OMGP23515 440 aa16.06■□□□□ 0.16
HOXC4-201ENST00000303406 ATP6V0CP27449 155 aa16.06■□□□□ 0.16
HOXC4-201ENST00000303406 G6PCP35575 357 aa16.06■□□□□ 0.16
HOXC4-201ENST00000303406 LTC4SQ16873 150 aa16.06■□□□□ 0.16
HOXC4-201ENST00000303406 C10orf91Q5T1B1 145 aa16.06■□□□□ 0.16
HOXC4-201ENST00000303406 FAM216BQ8N7L0 139 aa16.06■□□□□ 0.16
HOXC4-201ENST00000303406 PARD6GQ9BYG4 376 aaPredicted RBP16.06■□□□□ 0.16
HOXC4-201ENST00000303406 RAI1Q7Z5J4 1906 aaPredicted RBP16.06■□□□□ 0.16
HOXC4-201ENST00000303406 ARID1AO14497 2285 aa16.06■□□□□ 0.16
HOXC4-201ENST00000303406 SPTBN2O15020 2390 aa16.05■□□□□ 0.16
HOXC4-201ENST00000303406 DSCAML1Q8TD84 2053 aa16.05■□□□□ 0.16
HOXC4-201ENST00000303406 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.05■□□□□ 0.16
HOXC4-201ENST00000303406 TNFRSF13BO14836 293 aaPredicted RBP16.05■□□□□ 0.16
HOXC4-201ENST00000303406 KRASP01116 189 aa16.05■□□□□ 0.16
HOXC4-201ENST00000303406 HBG1P69891 147 aa16.05■□□□□ 0.16
HOXC4-201ENST00000303406 HBG2P69892 147 aa16.05■□□□□ 0.16
HOXC4-201ENST00000303406 NCR3LG1Q68D85 454 aa16.05■□□□□ 0.16
HOXC4-201ENST00000303406 DUX4L9Q6RFH8 374 aaPredicted RBP16.05■□□□□ 0.16
HOXC4-201ENST00000303406 H2BFWTQ7Z2G1 175 aa16.05■□□□□ 0.16
HOXC4-201ENST00000303406 ZNF439Q8NDP4 499 aa16.05■□□□□ 0.16
HOXC4-201ENST00000303406 DYNLRB1Q9NP97 96 aa16.05■□□□□ 0.16
HOXC4-201ENST00000303406 TMEM106BQ9NUM4 274 aa16.05■□□□□ 0.16
HOXC4-201ENST00000303406 PRELID3BQ9Y3B1 194 aa16.05■□□□□ 0.16
HOXC4-201ENST00000303406 TANC2Q9HCD6 1990 aa16.05■□□□□ 0.16
HOXC4-201ENST00000303406 B8ZZF3 427 aa16.04■□□□□ 0.16
HOXC4-201ENST00000303406 ATXN7O15265 892 aaPredicted RBP16.04■□□□□ 0.16
HOXC4-201ENST00000303406 SCAF4O95104 1147 aaKnown RBP16.04■□□□□ 0.16
HOXC4-201ENST00000303406 OR8U8P0C7N1 319 aa16.04■□□□□ 0.16
HOXC4-201ENST00000303406 CAMLGP49069 296 aa16.04■□□□□ 0.16
HOXC4-201ENST00000303406 ZNF134P52741 427 aa16.04■□□□□ 0.16
HOXC4-201ENST00000303406 OR2B11Q5JQS5 317 aa16.04■□□□□ 0.16
HOXC4-201ENST00000303406 TMEM14EPQ6UXP3 125 aa16.04■□□□□ 0.16
HOXC4-201ENST00000303406 DPPA3Q6W0C5 159 aa16.04■□□□□ 0.16
HOXC4-201ENST00000303406 ADTRPQ96IZ2 230 aa16.04■□□□□ 0.16
HOXC4-201ENST00000303406 CIB3Q96Q77 187 aaPredicted RBP16.04■□□□□ 0.16
HOXC4-201ENST00000303406 SH3BGRL3Q9H299 93 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms