RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 AMER3Q8N944 861 aa10.54□□□□□ -0.72
PCF11-201ENST00000298281 CEP290O15078 2479 aa10.54□□□□□ -0.72
PCF11-201ENST00000298281 RBFOX3A6NFN3 312 aa10.54□□□□□ -0.72
PCF11-201ENST00000298281 TEPPQ6URK8 271 aa10.54□□□□□ -0.72
PCF11-201ENST00000298281 TNFRSF12AQ9NP84 129 aa10.54□□□□□ -0.72
PCF11-201ENST00000298281 RNF7Q9UBF6 113 aa10.54□□□□□ -0.72
PCF11-201ENST00000298281 PLCE1Q9P212 2302 aa10.54□□□□□ -0.72
PCF11-201ENST00000298281 P2RY1P47900 373 aa10.54□□□□□ -0.72
PCF11-201ENST00000298281 MVDP53602 400 aa10.54□□□□□ -0.72
PCF11-201ENST00000298281 PLPPR5Q32ZL2 321 aa10.54□□□□□ -0.72
PCF11-201ENST00000298281 Q6ZS52 159 aa10.54□□□□□ -0.72
PCF11-201ENST00000298281 MOSPD3O75425 235 aa10.54□□□□□ -0.72
PCF11-201ENST00000298281 MFAP2P55001 183 aa10.54□□□□□ -0.72
PCF11-201ENST00000298281 NFAM1Q8NET5 270 aaPredicted RBP10.54□□□□□ -0.72
PCF11-201ENST00000298281 DOCK2Q92608 1830 aa10.54□□□□□ -0.72
PCF11-201ENST00000298281 CEACAM18A8MTB9 384 aa10.54□□□□□ -0.72
PCF11-201ENST00000298281 C16orf97H3BN30 126 aa10.54□□□□□ -0.72
PCF11-201ENST00000298281 H3BRM9 83 aa10.54□□□□□ -0.72
PCF11-201ENST00000298281 CRYBB2P43320 205 aa10.54□□□□□ -0.72
PCF11-201ENST00000298281 SPATA45Q537H7 98 aa10.54□□□□□ -0.72
PCF11-201ENST00000298281 MUC20Q8N307 709 aaPredicted RBP10.54□□□□□ -0.72
PCF11-201ENST00000298281 OR9G4Q8NGQ1 327 aa10.54□□□□□ -0.72
PCF11-201ENST00000298281 LINC01565O15544 149 aa10.54□□□□□ -0.72
PCF11-201ENST00000298281 CTSVO60911 334 aa10.54□□□□□ -0.72
PCF11-201ENST00000298281 SSTR5P35346 364 aa10.54□□□□□ -0.72
PCF11-201ENST00000298281 UNQ5815/PRO19632Q6UWF5 114 aa10.54□□□□□ -0.72
PCF11-201ENST00000298281 TMEFF2Q9UIK5 374 aaPredicted RBP10.54□□□□□ -0.72
PCF11-201ENST00000298281 STARD10Q9Y365 291 aa10.54□□□□□ -0.72
PCF11-201ENST00000298281 NCKAP5O14513 1909 aa10.54□□□□□ -0.72
PCF11-201ENST00000298281 CTDSPLO15194 276 aa10.53□□□□□ -0.72
PCF11-201ENST00000298281 GZMBP10144 247 aa10.53□□□□□ -0.72
PCF11-201ENST00000298281 FGF5P12034 268 aa10.53□□□□□ -0.72
PCF11-201ENST00000298281 TMPRSS3P57727 454 aa10.53□□□□□ -0.72
PCF11-201ENST00000298281 TMEM177Q53S58 311 aa10.53□□□□□ -0.72
PCF11-201ENST00000298281 LINC01587Q99440 93 aa10.53□□□□□ -0.72
PCF11-201ENST00000298281 MARVELD1Q9BSK0 173 aa10.53□□□□□ -0.72
PCF11-201ENST00000298281 LHX9Q9NQ69 397 aa10.53□□□□□ -0.72
PCF11-201ENST00000298281 METTL1Q9UBP6 276 aaKnown RBP10.53□□□□□ -0.72
PCF11-201ENST00000298281 HYPMO75409 117 aa10.53□□□□□ -0.72
PCF11-201ENST00000298281 VSIG10L2P0DP72 767 aa10.53□□□□□ -0.72
PCF11-201ENST00000298281 OTX1P32242 354 aaPredicted RBP10.53□□□□□ -0.72
PCF11-201ENST00000298281 HLA-DRB3P79483 266 aa10.53□□□□□ -0.72
PCF11-201ENST00000298281 MGAT2Q10469 447 aa10.53□□□□□ -0.72
PCF11-201ENST00000298281 GPR27Q9NS67 375 aa10.53□□□□□ -0.72
PCF11-201ENST00000298281 MBD1Q9UIS9 605 aaPredicted RBP10.53□□□□□ -0.72
PCF11-201ENST00000298281 IGHV3-72A0A0B4J1Y9 119 aa10.53□□□□□ -0.72
PCF11-201ENST00000298281 RAE1P78406 368 aaKnown RBP10.53□□□□□ -0.72
PCF11-201ENST00000298281 FAM206AQ9NX38 181 aa10.53□□□□□ -0.72
PCF11-201ENST00000298281 IGHV4-39P01824 125 aa10.53□□□□□ -0.72
PCF11-201ENST00000298281 NKG7Q16617 165 aa10.53□□□□□ -0.72
PCF11-201ENST00000298281 S100A7L2Q5SY68 101 aa10.53□□□□□ -0.72
PCF11-201ENST00000298281 ANGPTL4Q9BY76 406 aa10.53□□□□□ -0.72
PCF11-201ENST00000298281 FAM74A7A6NL05 159 aa10.53□□□□□ -0.72
PCF11-201ENST00000298281 STHQ8IWL8 128 aa10.53□□□□□ -0.72
PCF11-201ENST00000298281 OR4D5Q8NGN0 318 aa10.53□□□□□ -0.72
PCF11-201ENST00000298281 C17orf51A8MQB3 221 aa10.53□□□□□ -0.72
PCF11-201ENST00000298281 SNRPEP62304 92 aaKnown RBP10.53□□□□□ -0.72
PCF11-201ENST00000298281 PMS2CLQ68D20 193 aa10.53□□□□□ -0.72
PCF11-201ENST00000298281 DTX2Q86UW9 622 aa10.53□□□□□ -0.72
PCF11-201ENST00000298281 DOCK3Q8IZD9 2030 aa10.52□□□□□ -0.72
PCF11-201ENST00000298281 OR1K1Q8NGR3 316 aa10.52□□□□□ -0.72
PCF11-201ENST00000298281 IGHV1OR15-9A0A0B4J2B8 117 aa10.52□□□□□ -0.72
PCF11-201ENST00000298281 SEC11BP0C7V7 166 aa10.52□□□□□ -0.72
PCF11-201ENST00000298281 UCNP55089 124 aa10.52□□□□□ -0.72
PCF11-201ENST00000298281 ADAMTS17Q8TE56 1095 aa10.52□□□□□ -0.72
PCF11-201ENST00000298281 RNF133Q8WVZ7 376 aa10.52□□□□□ -0.72
PCF11-201ENST00000298281 ASB10Q8WXI3 467 aa10.52□□□□□ -0.72
PCF11-201ENST00000298281 GMPPAQ96IJ6 420 aaPredicted RBP10.52□□□□□ -0.72
PCF11-201ENST00000298281 WIPI2Q9Y4P8 454 aa10.52□□□□□ -0.72
PCF11-201ENST00000298281 COX11Q9Y6N1 276 aa10.52□□□□□ -0.72
PCF11-201ENST00000298281 MEF2CQ06413 473 aaPredicted RBP10.52□□□□□ -0.73
PCF11-201ENST00000298281 PRSS42Q7Z5A4 293 aa10.52□□□□□ -0.73
PCF11-201ENST00000298281 MYEOVQ96EZ4 313 aa10.52□□□□□ -0.73
PCF11-201ENST00000298281 POLR2GP62487 172 aaKnown RBP eCLIP10.52□□□□□ -0.73
PCF11-201ENST00000298281 LILRA6Q6PI73 481 aa10.52□□□□□ -0.73
PCF11-201ENST00000298281 WNT10AQ9GZT5 417 aa10.52□□□□□ -0.73
PCF11-201ENST00000298281 A8MWL6 223 aa10.52□□□□□ -0.73
PCF11-201ENST00000298281 ST3GAL2Q16842 350 aa10.52□□□□□ -0.73
PCF11-201ENST00000298281 ANKRD20A5PA0PJZ0 165 aa10.52□□□□□ -0.73
PCF11-201ENST00000298281 ISXQ2M1V0 245 aa10.52□□□□□ -0.73
PCF11-201ENST00000298281 TMEM106BQ9NUM4 274 aa10.52□□□□□ -0.73
PCF11-201ENST00000298281 PAPPA2Q9BXP8 1791 aa10.52□□□□□ -0.73
PCF11-201ENST00000298281 FDCSPQ8NFU4 85 aa10.51□□□□□ -0.73
PCF11-201ENST00000298281 IFT22Q9H7X7 185 aa10.51□□□□□ -0.73
PCF11-201ENST00000298281 VAX2Q9UIW0 290 aa10.51□□□□□ -0.73
PCF11-201ENST00000298281 K7N7A8 449 aa10.51□□□□□ -0.73
PCF11-201ENST00000298281 TRGC1P0CF51 173 aa10.51□□□□□ -0.73
PCF11-201ENST00000298281 HCP5Q6MZN7 132 aa10.51□□□□□ -0.73
PCF11-201ENST00000298281 CLEC18BQ6UXF7 455 aa10.51□□□□□ -0.73
PCF11-201ENST00000298281 TUBD1Q9UJT1 453 aa10.51□□□□□ -0.73
PCF11-201ENST00000298281 LDLRAD4O15165 306 aa10.51□□□□□ -0.73
PCF11-201ENST00000298281 MMP9P14780 707 aa10.51□□□□□ -0.73
PCF11-201ENST00000298281 KLF9Q13886 244 aaPredicted RBP10.51□□□□□ -0.73
PCF11-201ENST00000298281 KIAA0040Q15053 153 aa10.51□□□□□ -0.73
PCF11-201ENST00000298281 INO80CQ6PI98 192 aaPredicted RBP10.51□□□□□ -0.73
PCF11-201ENST00000298281 CDC42EP3Q9UKI2 254 aa10.51□□□□□ -0.73
PCF11-201ENST00000298281 PEX11BO96011 259 aa10.51□□□□□ -0.73
PCF11-201ENST00000298281 PATE4P0C8F1 98 aa10.51□□□□□ -0.73
PCF11-201ENST00000298281 PAPPA-AS1Q5QFB9 102 aa10.51□□□□□ -0.73
PCF11-201ENST00000298281 COX14Q96I36 57 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms