RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 LHX2P50458 406 aa13.3□□□□□ -0.28
FNDC1-201ENST00000297267 P2RY4P51582 365 aa13.3□□□□□ -0.28
FNDC1-201ENST00000297267 PLAURQ03405 335 aa13.3□□□□□ -0.28
FNDC1-201ENST00000297267 DEGS2Q6QHC5 323 aa13.3□□□□□ -0.28
FNDC1-201ENST00000297267 ZNF441Q8N8Z8 693 aa13.3□□□□□ -0.28
FNDC1-201ENST00000297267 OR5R1Q8NH85 324 aa13.3□□□□□ -0.28
FNDC1-201ENST00000297267 IFITM10A6NMD0 228 aa13.29□□□□□ -0.28
FNDC1-201ENST00000297267 UNC119Q13432 240 aa13.29□□□□□ -0.28
FNDC1-201ENST00000297267 UBE2V2Q15819 145 aa13.29□□□□□ -0.28
FNDC1-201ENST00000297267 PRDM14Q9GZV8 571 aa13.29□□□□□ -0.28
FNDC1-201ENST00000297267 M0R143 59 aa13.29□□□□□ -0.28
FNDC1-201ENST00000297267 RECKO95980 971 aa13.29□□□□□ -0.28
FNDC1-201ENST00000297267 CD74P04233 296 aa13.29□□□□□ -0.28
FNDC1-201ENST00000297267 RFPL3SP0C7P2 107 aa13.29□□□□□ -0.28
FNDC1-201ENST00000297267 GPR6P46095 362 aaPredicted RBP13.29□□□□□ -0.28
FNDC1-201ENST00000297267 ZNF660Q6AZW8 331 aaPredicted RBP13.29□□□□□ -0.28
FNDC1-201ENST00000297267 ATG101Q9BSB4 218 aa13.29□□□□□ -0.28
FNDC1-201ENST00000297267 KNL1Q8NG31 2342 aa13.29□□□□□ -0.28
FNDC1-201ENST00000297267 TP53BP1Q12888 1972 aaPredicted RBP13.29□□□□□ -0.28
FNDC1-201ENST00000297267 THY1P04216 161 aa13.29□□□□□ -0.28
FNDC1-201ENST00000297267 PUSL1Q8N0Z8 303 aaKnown RBP13.29□□□□□ -0.28
FNDC1-201ENST00000297267 SNRNP40Q96DI7 357 aaKnown RBP13.29□□□□□ -0.28
FNDC1-201ENST00000297267 ANK1P16157 1881 aa13.29□□□□□ -0.28
FNDC1-201ENST00000297267 DHRS7CA6NNS2 312 aa13.29□□□□□ -0.28
FNDC1-201ENST00000297267 KLF7O75840 302 aaPredicted RBP13.29□□□□□ -0.28
FNDC1-201ENST00000297267 HOXA4Q00056 320 aaPredicted RBP13.29□□□□□ -0.28
FNDC1-201ENST00000297267 Q8WTZ3 238 aa13.29□□□□□ -0.28
FNDC1-201ENST00000297267 RAB1CQ92928 201 aa13.29□□□□□ -0.28
FNDC1-201ENST00000297267 C16orf92Q96LL3 132 aa13.29□□□□□ -0.28
FNDC1-201ENST00000297267 GPR61Q9BZJ8 451 aa13.29□□□□□ -0.28
FNDC1-201ENST00000297267 PARP14Q460N5 1801 aa13.29□□□□□ -0.28
FNDC1-201ENST00000297267 M0R3E3 92 aa13.29□□□□□ -0.28
FNDC1-201ENST00000297267 MFAP2P55001 183 aa13.29□□□□□ -0.28
FNDC1-201ENST00000297267 OR1N2Q8NGR9 330 aa13.29□□□□□ -0.28
FNDC1-201ENST00000297267 ARF6P62330 175 aa13.29□□□□□ -0.28
FNDC1-201ENST00000297267 PERPQ96FX8 193 aa13.29□□□□□ -0.28
FNDC1-201ENST00000297267 ZNF645Q8N7E2 425 aa13.28□□□□□ -0.28
FNDC1-201ENST00000297267 MYOZ3Q8TDC0 251 aa13.28□□□□□ -0.28
FNDC1-201ENST00000297267 ZNF714Q96N38 554 aa13.28□□□□□ -0.28
FNDC1-201ENST00000297267 C5orf66Q9H5L9 145 aa13.28□□□□□ -0.28
FNDC1-201ENST00000297267 TMEM167BQ9NRX6 74 aa13.28□□□□□ -0.28
FNDC1-201ENST00000297267 SLC25A17O43808 307 aa13.28□□□□□ -0.28
FNDC1-201ENST00000297267 ZNF362Q5T0B9 420 aaPredicted RBP13.28□□□□□ -0.28
FNDC1-201ENST00000297267 ZNRF1Q8ND25 227 aa13.28□□□□□ -0.28
FNDC1-201ENST00000297267 ZNF738Q8NE65 137 aa13.28□□□□□ -0.28
FNDC1-201ENST00000297267 FAM74A4Q5TZK3 123 aa13.28□□□□□ -0.28
FNDC1-201ENST00000297267 GHITMQ9H3K2 345 aa13.28□□□□□ -0.28
FNDC1-201ENST00000297267 PPIAL4EA0A075B759 164 aa13.28□□□□□ -0.28
FNDC1-201ENST00000297267 IGSF23A1L1A6 192 aa13.28□□□□□ -0.28
FNDC1-201ENST00000297267 PPIAL4DF5H284 164 aa13.28□□□□□ -0.28
FNDC1-201ENST00000297267 PPIAL4FP0DN26 164 aa13.28□□□□□ -0.28
FNDC1-201ENST00000297267 ROM1Q03395 351 aa13.28□□□□□ -0.28
FNDC1-201ENST00000297267 C1orf185Q5T7R7 199 aa13.28□□□□□ -0.28
FNDC1-201ENST00000297267 DUSP15Q9H1R2 295 aaPredicted RBP13.28□□□□□ -0.28
FNDC1-201ENST00000297267 PPIAL4AQ9Y536 164 aa13.28□□□□□ -0.28
FNDC1-201ENST00000297267 PATJQ8NI35 1801 aa13.28□□□□□ -0.28
FNDC1-201ENST00000297267 PF4V1P10720 104 aa13.27□□□□□ -0.28
FNDC1-201ENST00000297267 PPP1R3EQ9H7J1 279 aa13.27□□□□□ -0.28
FNDC1-201ENST00000297267 BEX4Q9NWD9 120 aaPredicted RBP13.27□□□□□ -0.28
FNDC1-201ENST00000297267 PILRAQ9UKJ1 303 aa13.27□□□□□ -0.28
FNDC1-201ENST00000297267 SHISA3A0PJX4 238 aa13.27□□□□□ -0.28
FNDC1-201ENST00000297267 CA2P00918 260 aa13.27□□□□□ -0.28
FNDC1-201ENST00000297267 LAIR2Q6ISS4 152 aa13.27□□□□□ -0.28
FNDC1-201ENST00000297267 OR4B1Q8NGF8 309 aa13.27□□□□□ -0.28
FNDC1-201ENST00000297267 ZNF552Q9H707 407 aaPredicted RBP13.27□□□□□ -0.28
FNDC1-201ENST00000297267 J3QT63 122 aa13.27□□□□□ -0.29
FNDC1-201ENST00000297267 VDAC1P21796 283 aa13.27□□□□□ -0.29
FNDC1-201ENST00000297267 CEACAM21Q3KPI0 293 aa13.27□□□□□ -0.29
FNDC1-201ENST00000297267 TP53RKQ96S44 253 aa13.27□□□□□ -0.29
FNDC1-201ENST00000297267 ARID1AO14497 2285 aa13.27□□□□□ -0.29
FNDC1-201ENST00000297267 DOCK3Q8IZD9 2030 aa13.27□□□□□ -0.29
FNDC1-201ENST00000297267 PGPA6NDG6 321 aa13.27□□□□□ -0.29
FNDC1-201ENST00000297267 MFSD2BA6NFX1 497 aa13.27□□□□□ -0.29
FNDC1-201ENST00000297267 C16orf97H3BN30 126 aa13.27□□□□□ -0.29
FNDC1-201ENST00000297267 LINC01387J3KSC0 135 aa13.27□□□□□ -0.29
FNDC1-201ENST00000297267 TMEM211Q6ICI0 200 aa13.27□□□□□ -0.29
FNDC1-201ENST00000297267 SIGLEC12Q96PQ1 595 aa13.27□□□□□ -0.29
FNDC1-201ENST00000297267 DCTN5Q9BTE1 182 aa13.27□□□□□ -0.29
FNDC1-201ENST00000297267 IGKV1D-42A0A075B6H8 117 aa13.26□□□□□ -0.29
FNDC1-201ENST00000297267 CRYBB3P26998 211 aa13.26□□□□□ -0.29
FNDC1-201ENST00000297267 ATP6V1FQ16864 119 aa13.26□□□□□ -0.29
FNDC1-201ENST00000297267 IMMP2LQ96T52 175 aa13.26□□□□□ -0.29
FNDC1-201ENST00000297267 C7orf71A4D174 169 aa13.26□□□□□ -0.29
FNDC1-201ENST00000297267 ZNF324O75467 553 aaPredicted RBP13.26□□□□□ -0.29
FNDC1-201ENST00000297267 CD82P27701 267 aa13.26□□□□□ -0.29
FNDC1-201ENST00000297267 MRPL18Q9H0U6 180 aaKnown RBP13.26□□□□□ -0.29
FNDC1-201ENST00000297267 FAM206AQ9NX38 181 aa13.26□□□□□ -0.29
FNDC1-201ENST00000297267 CD24P25063 80 aa13.26□□□□□ -0.29
FNDC1-201ENST00000297267 EIF4EBP2Q13542 120 aaPredicted RBP13.26□□□□□ -0.29
FNDC1-201ENST00000297267 DOLPP1Q86YN1 238 aa13.26□□□□□ -0.29
FNDC1-201ENST00000297267 TIMP4Q99727 224 aa13.26□□□□□ -0.29
FNDC1-201ENST00000297267 LINC00862A6NCI5 91 aa13.26□□□□□ -0.29
FNDC1-201ENST00000297267 PDE6DO43924 150 aa13.26□□□□□ -0.29
FNDC1-201ENST00000297267 CELA3BP08861 270 aa13.26□□□□□ -0.29
FNDC1-201ENST00000297267 CEACAM3P40198 252 aa13.26□□□□□ -0.29
FNDC1-201ENST00000297267 ZNF837Q96EG3 531 aaPredicted RBP13.26□□□□□ -0.29
FNDC1-201ENST00000297267 CBLN4Q9NTU7 201 aa13.26□□□□□ -0.29
FNDC1-201ENST00000297267 LOC107984156A0A0G2JMH3 177 aa13.25□□□□□ -0.29
FNDC1-201ENST00000297267 K7N7A8 449 aa13.25□□□□□ -0.29
FNDC1-201ENST00000297267 LINC00869P0C866 280 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms