RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 ZNF808Q8N4W9 903 aaPredicted RBP8.54□□□□□ -1.04
COPB1-201ENST00000249923 LFNGQ8NES3 379 aa8.54□□□□□ -1.04
COPB1-201ENST00000249923 GTF3AQ92664 365 aaKnown RBP8.54□□□□□ -1.04
COPB1-201ENST00000249923 BCL2L2Q92843 193 aaPredicted RBP8.54□□□□□ -1.04
COPB1-201ENST00000249923 PCGF1Q9BSM1 259 aa8.54□□□□□ -1.04
COPB1-201ENST00000249923 HINT2Q9BX68 163 aa8.54□□□□□ -1.04
COPB1-201ENST00000249923 PTPRBP23467 1997 aa8.54□□□□□ -1.04
COPB1-201ENST00000249923 SELLP14151 372 aa8.53□□□□□ -1.04
COPB1-201ENST00000249923 MEOX1P50221 254 aa8.53□□□□□ -1.04
COPB1-201ENST00000249923 ELOBQ15370 118 aa8.53□□□□□ -1.04
COPB1-201ENST00000249923 WDYHV1Q96HA8 205 aa8.53□□□□□ -1.04
COPB1-201ENST00000249923 HIST1H2AAQ96QV6 131 aa8.53□□□□□ -1.04
COPB1-201ENST00000249923 CADP27708 2225 aa8.53□□□□□ -1.04
COPB1-201ENST00000249923 A0A1B0GUS0 222 aa8.53□□□□□ -1.04
COPB1-201ENST00000249923 MPLP40238 635 aa8.53□□□□□ -1.04
COPB1-201ENST00000249923 ABHD14BQ96IU4 210 aa8.53□□□□□ -1.04
COPB1-201ENST00000249923 ATP5SQ99766 215 aa8.53□□□□□ -1.04
COPB1-201ENST00000249923 HIPK2Q9H2X6 1198 aa8.53□□□□□ -1.04
COPB1-201ENST00000249923 KIAA1456Q9P272 454 aa8.53□□□□□ -1.04
COPB1-201ENST00000249923 PAM16Q9Y3D7 125 aa8.53□□□□□ -1.04
COPB1-201ENST00000249923 DUXBA0A1W2PPF3 345 aa8.53□□□□□ -1.04
COPB1-201ENST00000249923 ZNF320A2RRD8 509 aa8.53□□□□□ -1.04
COPB1-201ENST00000249923 CDX4O14627 284 aaPredicted RBP8.53□□□□□ -1.04
COPB1-201ENST00000249923 OR2H2O95918 312 aa8.53□□□□□ -1.04
COPB1-201ENST00000249923 CD59P13987 128 aa8.53□□□□□ -1.04
COPB1-201ENST00000249923 BRWD1-AS2P59051 145 aa8.53□□□□□ -1.04
COPB1-201ENST00000249923 TMEM41BQ5BJD5 291 aa8.53□□□□□ -1.04
COPB1-201ENST00000249923 TOMM20LQ6UXN7 152 aa8.53□□□□□ -1.04
COPB1-201ENST00000249923 ZNF497Q6ZNH5 498 aa8.53□□□□□ -1.04
COPB1-201ENST00000249923 Q6ZR03 302 aa8.53□□□□□ -1.04
COPB1-201ENST00000249923 OR13D1Q8NGV5 346 aa8.53□□□□□ -1.04
COPB1-201ENST00000249923 OR10J5Q8NHC4 309 aa8.53□□□□□ -1.04
COPB1-201ENST00000249923 MALSU1Q96EH3 234 aa8.53□□□□□ -1.04
COPB1-201ENST00000249923 SPIN2AQ99865 258 aa8.53□□□□□ -1.04
COPB1-201ENST00000249923 SPIN2BQ9BPZ2 258 aa8.53□□□□□ -1.04
COPB1-201ENST00000249923 SAMD10Q9BYL1 202 aa8.53□□□□□ -1.04
COPB1-201ENST00000249923 CACNG5Q9UF02 275 aa8.53□□□□□ -1.04
COPB1-201ENST00000249923 AKAP13Q12802 2813 aa8.53□□□□□ -1.04
COPB1-201ENST00000249923 SIRPB1O00241 398 aa8.52□□□□□ -1.05
COPB1-201ENST00000249923 SYNGR4O95473 234 aa8.52□□□□□ -1.05
COPB1-201ENST00000249923 FGF7P21781 194 aa8.52□□□□□ -1.05
COPB1-201ENST00000249923 PKIAP61925 76 aa8.52□□□□□ -1.05
COPB1-201ENST00000249923 GNG3P63215 75 aa8.52□□□□□ -1.05
COPB1-201ENST00000249923 P2RY6Q15077 328 aa8.52□□□□□ -1.05
COPB1-201ENST00000249923 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.52□□□□□ -1.05
COPB1-201ENST00000249923 SCCPDHQ8NBX0 429 aa8.52□□□□□ -1.05
COPB1-201ENST00000249923 DEFB127Q9H1M4 99 aa8.52□□□□□ -1.05
COPB1-201ENST00000249923 NPIPB11E5RHQ5 1161 aa8.52□□□□□ -1.05
COPB1-201ENST00000249923 SLC31A2O15432 143 aa8.52□□□□□ -1.05
COPB1-201ENST00000249923 PSPNO60542 156 aa8.52□□□□□ -1.05
COPB1-201ENST00000249923 RAMP3O60896 148 aa8.52□□□□□ -1.05
COPB1-201ENST00000249923 KRASP01116 189 aa8.52□□□□□ -1.05
COPB1-201ENST00000249923 SP1P08047 785 aa8.52□□□□□ -1.05
COPB1-201ENST00000249923 HIST1H1BP16401 226 aaKnown RBP8.52□□□□□ -1.05
COPB1-201ENST00000249923 ARR3P36575 388 aa8.52□□□□□ -1.05
COPB1-201ENST00000249923 BAXQ07812 192 aa8.52□□□□□ -1.05
COPB1-201ENST00000249923 RNF151Q2KHN1 245 aa8.52□□□□□ -1.05
COPB1-201ENST00000249923 OR8G5Q8NG78 346 aa8.52□□□□□ -1.05
COPB1-201ENST00000249923 OR2J1Q9GZK6 312 aa8.52□□□□□ -1.05
COPB1-201ENST00000249923 RPRMQ9NS64 109 aa8.52□□□□□ -1.05
COPB1-201ENST00000249923 B4GALT7Q9UBV7 327 aa8.52□□□□□ -1.05
COPB1-201ENST00000249923 CACNA1HO95180 2353 aa8.52□□□□□ -1.05
COPB1-201ENST00000249923 GRIFINA4D1Z8 144 aa8.52□□□□□ -1.05
COPB1-201ENST00000249923 ST8SIA5O15466 376 aa8.52□□□□□ -1.05
COPB1-201ENST00000249923 DFFBO76075 338 aa8.52□□□□□ -1.05
COPB1-201ENST00000249923 PTBP3O95758 552 aaKnown RBP8.52□□□□□ -1.05
COPB1-201ENST00000249923 TAS2R30P59541 319 aa8.52□□□□□ -1.05
COPB1-201ENST00000249923 ZNF506Q5JVG8 444 aa8.52□□□□□ -1.05
COPB1-201ENST00000249923 ZNF709Q8N972 641 aa8.52□□□□□ -1.05
COPB1-201ENST00000249923 ZPBPQ9BS86 351 aa8.52□□□□□ -1.05
COPB1-201ENST00000249923 LOC102724200A0A096LPH7 203 aaPredicted RBP8.51□□□□□ -1.05
COPB1-201ENST00000249923 OR5B21A6NL26 309 aa8.51□□□□□ -1.05
COPB1-201ENST00000249923 C1QTNF9BB2RNN3 333 aa8.51□□□□□ -1.05
COPB1-201ENST00000249923 CDIPTO14735 213 aa8.51□□□□□ -1.05
COPB1-201ENST00000249923 SMPD2O60906 423 aa8.51□□□□□ -1.05
COPB1-201ENST00000249923 WNT2P09544 360 aa8.51□□□□□ -1.05
COPB1-201ENST00000249923 GALR1P47211 349 aa8.51□□□□□ -1.05
COPB1-201ENST00000249923 LINC00205P59089 165 aa8.51□□□□□ -1.05
COPB1-201ENST00000249923 SSTP61278 116 aa8.51□□□□□ -1.05
COPB1-201ENST00000249923 FAM90A2PQ658T7 463 aa8.51□□□□□ -1.05
COPB1-201ENST00000249923 LINC00596Q86U02 117 aa8.51□□□□□ -1.05
COPB1-201ENST00000249923 ZNF573Q86YE8 665 aa8.51□□□□□ -1.05
COPB1-201ENST00000249923 OR10V1Q8NGI7 309 aa8.51□□□□□ -1.05
COPB1-201ENST00000249923 MPC1Q9Y5U8 109 aa8.51□□□□□ -1.05
COPB1-201ENST00000249923 PKDREJQ9NTG1 2253 aa8.51□□□□□ -1.05
COPB1-201ENST00000249923 ANKRD30BLA7E2S9 258 aa8.51□□□□□ -1.05
COPB1-201ENST00000249923 TGOLN2O43493 480 aa8.51□□□□□ -1.05
COPB1-201ENST00000249923 IGKV1D-33P01593 117 aa8.51□□□□□ -1.05
COPB1-201ENST00000249923 IGKV1-33P01594 117 aa8.51□□□□□ -1.05
COPB1-201ENST00000249923 SLC35B1P78383 322 aa8.51□□□□□ -1.05
COPB1-201ENST00000249923 ZNF766Q5HY98 468 aa8.51□□□□□ -1.05
COPB1-201ENST00000249923 PRR31Q5SQ13 230 aa8.51□□□□□ -1.05
COPB1-201ENST00000249923 ZNF525Q8N782 197 aa8.51□□□□□ -1.05
COPB1-201ENST00000249923 PKIBQ9C010 78 aa8.51□□□□□ -1.05
COPB1-201ENST00000249923 MBNL3Q9NUK0 354 aaKnown RBP8.51□□□□□ -1.05
COPB1-201ENST00000249923 SPTBN1Q01082 2364 aaKnown RBP8.51□□□□□ -1.05
COPB1-201ENST00000249923 A0A1B0GU03 582 aa8.5□□□□□ -1.05
COPB1-201ENST00000249923 MAP1LC3B2A6NCE7 125 aa8.5□□□□□ -1.05
COPB1-201ENST00000249923 J3QT63 122 aa8.5□□□□□ -1.05
COPB1-201ENST00000249923 CTXN2P0C2S0 81 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 1016.5 ms