RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 RAB29O14966 203 aa16.26■□□□□ 0.19
SNRPA-201ENST00000243563 PGAM2P15259 253 aa16.26■□□□□ 0.19
SNRPA-201ENST00000243563 UCP3P55916 312 aa16.26■□□□□ 0.19
SNRPA-201ENST00000243563 LGALS4P56470 323 aa16.26■□□□□ 0.19
SNRPA-201ENST00000243563 RPL30P62888 115 aaKnown RBP16.26■□□□□ 0.19
SNRPA-201ENST00000243563 GLDNQ6ZMI3 551 aaPredicted RBP16.26■□□□□ 0.19
SNRPA-201ENST00000243563 ADAD2Q8NCV1 583 aaKnown RBP16.26■□□□□ 0.19
SNRPA-201ENST00000243563 RTN4IP1Q8WWV3 396 aaPredicted RBP16.26■□□□□ 0.19
SNRPA-201ENST00000243563 ZNF48Q96MX3 618 aaPredicted RBP16.26■□□□□ 0.19
SNRPA-201ENST00000243563 RTBDNQ9BSG5 229 aaPredicted RBP16.26■□□□□ 0.19
SNRPA-201ENST00000243563 TMEM160Q9NX00 188 aa16.26■□□□□ 0.19
SNRPA-201ENST00000243563 PIPOXQ9P0Z9 390 aa16.26■□□□□ 0.19
SNRPA-201ENST00000243563 ZNF221Q9UK13 617 aa16.26■□□□□ 0.19
SNRPA-201ENST00000243563 GPR132Q9UNW8 380 aa16.26■□□□□ 0.19
SNRPA-201ENST00000243563 AMMECR1Q9Y4X0 333 aaPredicted RBP16.26■□□□□ 0.19
SNRPA-201ENST00000243563 CUBNO60494 3623 aa16.25■□□□□ 0.19
SNRPA-201ENST00000243563 A0A1W2PPI3 338 aa16.25■□□□□ 0.19
SNRPA-201ENST00000243563 LINC00473A8K010 186 aa16.25■□□□□ 0.19
SNRPA-201ENST00000243563 LEUTXA8MZ59 168 aa16.25■□□□□ 0.19
SNRPA-201ENST00000243563 M0R1X1 148 aa16.25■□□□□ 0.19
SNRPA-201ENST00000243563 NDUFB6O95139 128 aa16.25■□□□□ 0.19
SNRPA-201ENST00000243563 MINOS1Q5TGZ0 78 aa16.25■□□□□ 0.19
SNRPA-201ENST00000243563 MINOS1-NBL1R4GNA1 71 aa16.25■□□□□ 0.19
SNRPA-201ENST00000243563 CT45A6P0DMU7 189 aa16.24■□□□□ 0.19
SNRPA-201ENST00000243563 CT45A5P0DMU8 189 aa16.24■□□□□ 0.19
SNRPA-201ENST00000243563 CT45A7P0DMV0 189 aa16.24■□□□□ 0.19
SNRPA-201ENST00000243563 TMEM230Q96A57 120 aa16.24■□□□□ 0.19
SNRPA-201ENST00000243563 GAB2Q9UQC2 676 aa16.24■□□□□ 0.19
SNRPA-201ENST00000243563 NSD1Q96L73 2696 aaPredicted RBP16.24■□□□□ 0.19
SNRPA-201ENST00000243563 IGHV3-72A0A0B4J1Y9 119 aa16.23■□□□□ 0.19
SNRPA-201ENST00000243563 ZNF816Q0VGE8 651 aaPredicted RBP16.23■□□□□ 0.19
SNRPA-201ENST00000243563 RBMS2Q15434 407 aaKnown RBP16.23■□□□□ 0.19
SNRPA-201ENST00000243563 DEFB112Q30KQ8 113 aa16.23■□□□□ 0.19
SNRPA-201ENST00000243563 C9orf139Q6ZV77 190 aa16.23■□□□□ 0.19
SNRPA-201ENST00000243563 SLC38A6Q8IZM9 456 aa16.23■□□□□ 0.19
SNRPA-201ENST00000243563 ZNF383Q8NA42 475 aa16.23■□□□□ 0.19
SNRPA-201ENST00000243563 BVESQ8NE79 360 aa16.23■□□□□ 0.19
SNRPA-201ENST00000243563 RPEQ96AT9 228 aa16.23■□□□□ 0.19
SNRPA-201ENST00000243563 NABP2Q9BQ15 211 aa16.23■□□□□ 0.19
SNRPA-201ENST00000243563 MS4A7Q9GZW8 240 aaPredicted RBP16.23■□□□□ 0.19
SNRPA-201ENST00000243563 FN1P02751 2386 aaKnown RBP16.23■□□□□ 0.19
SNRPA-201ENST00000243563 HIVEP2P31629 2446 aa16.23■□□□□ 0.19
SNRPA-201ENST00000243563 IGHV1-3A0A0C4DH29 117 aa16.23■□□□□ 0.19
SNRPA-201ENST00000243563 FAM240BA0A1B0GVZ2 78 aa16.23■□□□□ 0.19
SNRPA-201ENST00000243563 GPR31O00270 319 aa16.23■□□□□ 0.19
SNRPA-201ENST00000243563 TCRBP04435 133 aa16.23■□□□□ 0.19
SNRPA-201ENST00000243563 CD24P25063 80 aa16.23■□□□□ 0.19
SNRPA-201ENST00000243563 IL3RAP26951 378 aa16.23■□□□□ 0.19
SNRPA-201ENST00000243563 DUTP33316 252 aaKnown RBP16.23■□□□□ 0.19
SNRPA-201ENST00000243563 SRP14P37108 136 aaKnown RBP16.23■□□□□ 0.19
SNRPA-201ENST00000243563 RAB13P51153 203 aa16.23■□□□□ 0.19
SNRPA-201ENST00000243563 DEFA1P59665 94 aa16.23■□□□□ 0.19
SNRPA-201ENST00000243563 DEFA3P59666 94 aa16.23■□□□□ 0.19
SNRPA-201ENST00000243563 MZT2BQ6NZ67 158 aa16.23■□□□□ 0.19
SNRPA-201ENST00000243563 TGIF2LXQ8IUE1 241 aa16.23■□□□□ 0.19
SNRPA-201ENST00000243563 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.23■□□□□ 0.19
SNRPA-201ENST00000243563 FAM216AQ8WUB2 273 aa16.23■□□□□ 0.19
SNRPA-201ENST00000243563 CFHR4Q92496 578 aa16.23■□□□□ 0.19
SNRPA-201ENST00000243563 MALSU1Q96EH3 234 aa16.23■□□□□ 0.19
SNRPA-201ENST00000243563 DPAGT1Q9H3H5 408 aa16.23■□□□□ 0.19
SNRPA-201ENST00000243563 SLC2A9Q9NRM0 540 aa16.23■□□□□ 0.19
SNRPA-201ENST00000243563 TIMM23O14925 209 aa16.22■□□□□ 0.19
SNRPA-201ENST00000243563 PGLYRP1O75594 196 aaPredicted RBP16.22■□□□□ 0.19
SNRPA-201ENST00000243563 RLN1P04808 185 aa16.22■□□□□ 0.19
SNRPA-201ENST00000243563 CTSDP07339 412 aaPredicted RBP16.22■□□□□ 0.19
SNRPA-201ENST00000243563 BRWD1-AS2P59051 145 aa16.22■□□□□ 0.19
SNRPA-201ENST00000243563 TUSC1Q2TAM9 212 aa16.22■□□□□ 0.19
SNRPA-201ENST00000243563 S1PR3Q99500 378 aa16.22■□□□□ 0.19
SNRPA-201ENST00000243563 TRAV6A0A075B6T7 132 aa16.21■□□□□ 0.19
SNRPA-201ENST00000243563 ARPC1BO15143 372 aaKnown RBP16.21■□□□□ 0.19
SNRPA-201ENST00000243563 GAPDHP04406 335 aaKnown RBP16.21■□□□□ 0.19
SNRPA-201ENST00000243563 CEACAM3P40198 252 aa16.21■□□□□ 0.19
SNRPA-201ENST00000243563 PIGPP57054 158 aa16.21■□□□□ 0.19
SNRPA-201ENST00000243563 SURF2Q15527 256 aaPredicted RBP16.21■□□□□ 0.19
SNRPA-201ENST00000243563 OR2B11Q5JQS5 317 aa16.21■□□□□ 0.19
SNRPA-201ENST00000243563 TMED4Q7Z7H5 227 aa16.21■□□□□ 0.19
SNRPA-201ENST00000243563 DDB2Q92466 427 aa16.21■□□□□ 0.19
SNRPA-201ENST00000243563 SLC25A21Q9BQT8 299 aaPredicted RBP16.21■□□□□ 0.19
SNRPA-201ENST00000243563 C20orf85Q9H1P6 137 aa16.21■□□□□ 0.19
SNRPA-201ENST00000243563 NUDT15Q9NV35 164 aa16.21■□□□□ 0.19
SNRPA-201ENST00000243563 MTORP42345 2549 aa16.2■□□□□ 0.18
SNRPA-201ENST00000243563 NAV3Q8IVL0 2385 aa16.2■□□□□ 0.18
SNRPA-201ENST00000243563 MSMO1Q15800 293 aa16.2■□□□□ 0.18
SNRPA-201ENST00000243563 FAM71F2Q6NXP2 309 aa16.2■□□□□ 0.18
SNRPA-201ENST00000243563 MOB3BQ86TA1 216 aa16.2■□□□□ 0.18
SNRPA-201ENST00000243563 TBC1D26Q86UD7 250 aa16.2■□□□□ 0.18
SNRPA-201ENST00000243563 ZDHHC22Q8N966 263 aa16.2■□□□□ 0.18
SNRPA-201ENST00000243563 OR51H1Q8NH63 302 aa16.2■□□□□ 0.18
SNRPA-201ENST00000243563 ENKURQ8TC29 256 aa16.2■□□□□ 0.18
SNRPA-201ENST00000243563 CAPSLQ8WWF8 208 aa16.2■□□□□ 0.18
SNRPA-201ENST00000243563 AKR1E2Q96JD6 320 aa16.2■□□□□ 0.18
SNRPA-201ENST00000243563 BEX2Q9BXY8 128 aa16.2■□□□□ 0.18
SNRPA-201ENST00000243563 GHITMQ9H3K2 345 aa16.2■□□□□ 0.18
SNRPA-201ENST00000243563 BEX1Q9HBH7 125 aa16.2■□□□□ 0.18
SNRPA-201ENST00000243563 ANXA7P20073 488 aaKnown RBP16.19■□□□□ 0.18
SNRPA-201ENST00000243563 HNF1AP20823 631 aa16.19■□□□□ 0.18
SNRPA-201ENST00000243563 BPIFB3P59826 476 aa16.19■□□□□ 0.18
SNRPA-201ENST00000243563 DUSP18Q8NEJ0 188 aa16.19■□□□□ 0.18
SNRPA-201ENST00000243563 ZFAND1Q8TCF1 268 aa16.19■□□□□ 0.18
SNRPA-201ENST00000243563 PIFOQ8TCI5 191 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms