RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 HBZP02008 142 aa15.72■□□□□ 0.11
CPSF3-201ENST00000238112 AESQ08117 197 aa15.72■□□□□ 0.11
CPSF3-201ENST00000238112 SLC35E4Q6ICL7 350 aa15.72■□□□□ 0.11
CPSF3-201ENST00000238112 WDFY4Q6ZS81 3184 aa15.72■□□□□ 0.11
CPSF3-201ENST00000238112 ODAMA1E959 279 aa15.72■□□□□ 0.11
CPSF3-201ENST00000238112 S1PR2O95136 353 aa15.72■□□□□ 0.11
CPSF3-201ENST00000238112 CD55P08174 381 aa15.72■□□□□ 0.11
CPSF3-201ENST00000238112 MPV17P39210 176 aa15.72■□□□□ 0.11
CPSF3-201ENST00000238112 PSMB3P49720 205 aa15.72■□□□□ 0.11
CPSF3-201ENST00000238112 ADIRFQ15847 76 aa15.72■□□□□ 0.11
CPSF3-201ENST00000238112 NCR3LG1Q68D85 454 aa15.72■□□□□ 0.11
CPSF3-201ENST00000238112 CENPVQ7Z7K6 275 aaPredicted RBP15.72■□□□□ 0.11
CPSF3-201ENST00000238112 GCNT2Q8N0V5 402 aa15.72■□□□□ 0.11
CPSF3-201ENST00000238112 TMEM178AQ8NBL3 297 aa15.72■□□□□ 0.11
CPSF3-201ENST00000238112 OR10D4PQ8NGN7 298 aa15.72■□□□□ 0.11
CPSF3-201ENST00000238112 KLF14Q8TD94 323 aaPredicted RBP15.72■□□□□ 0.11
CPSF3-201ENST00000238112 FRZBQ92765 325 aa15.72■□□□□ 0.11
CPSF3-201ENST00000238112 SLC25A22Q9H936 323 aa15.72■□□□□ 0.11
CPSF3-201ENST00000238112 WNT9BO14905 357 aa15.71■□□□□ 0.11
CPSF3-201ENST00000238112 MBP02144 154 aa15.71■□□□□ 0.11
CPSF3-201ENST00000238112 P0C879 139 aa15.71■□□□□ 0.11
CPSF3-201ENST00000238112 CD59P13987 128 aa15.71■□□□□ 0.11
CPSF3-201ENST00000238112 FGF7P21781 194 aa15.71■□□□□ 0.11
CPSF3-201ENST00000238112 GABRA2P47869 451 aa15.71■□□□□ 0.11
CPSF3-201ENST00000238112 CD81P60033 236 aa15.71■□□□□ 0.11
CPSF3-201ENST00000238112 PDZD11Q5EBL8 140 aa15.71■□□□□ 0.11
CPSF3-201ENST00000238112 ATP1A1-AS1Q5TC04 95 aa15.71■□□□□ 0.11
CPSF3-201ENST00000238112 ACSM6Q6P461 480 aa15.71■□□□□ 0.11
CPSF3-201ENST00000238112 OR10P1Q8NGE3 313 aa15.71■□□□□ 0.11
CPSF3-201ENST00000238112 C5orf30Q96GV9 206 aa15.71■□□□□ 0.11
CPSF3-201ENST00000238112 SSX3Q99909 188 aa15.71■□□□□ 0.11
CPSF3-201ENST00000238112 AGMATQ9BSE5 352 aa15.71■□□□□ 0.11
CPSF3-201ENST00000238112 TRBV24-1A0A075B6N3 115 aa15.71■□□□□ 0.1
CPSF3-201ENST00000238112 HMGB3O15347 200 aaKnown RBP15.71■□□□□ 0.1
CPSF3-201ENST00000238112 SOD3P08294 240 aa15.71■□□□□ 0.1
CPSF3-201ENST00000238112 GFI1BQ5VTD9 330 aa15.71■□□□□ 0.1
CPSF3-201ENST00000238112 INO80CQ6PI98 192 aaPredicted RBP15.71■□□□□ 0.1
CPSF3-201ENST00000238112 ZNF826PQ6ZT77 177 aa15.71■□□□□ 0.1
CPSF3-201ENST00000238112 HIST3H2BBQ8N257 126 aa15.71■□□□□ 0.1
CPSF3-201ENST00000238112 MRGPRDQ8TDS7 321 aa15.71■□□□□ 0.1
CPSF3-201ENST00000238112 DTD1Q8TEA8 209 aa15.71■□□□□ 0.1
CPSF3-201ENST00000238112 ABHD5Q8WTS1 349 aa15.71■□□□□ 0.1
CPSF3-201ENST00000238112 GPR61Q9BZJ8 451 aa15.71■□□□□ 0.1
CPSF3-201ENST00000238112 ZDHHC11Q9H8X9 412 aa15.71■□□□□ 0.1
CPSF3-201ENST00000238112 CTXND1A0A1B0GTU2 59 aa15.7■□□□□ 0.1
CPSF3-201ENST00000238112 RBMXL2O75526 392 aaKnown RBP15.7■□□□□ 0.1
CPSF3-201ENST00000238112 TMEM241Q24JQ0 296 aa15.7■□□□□ 0.1
CPSF3-201ENST00000238112 C4orf17Q53FE4 359 aa15.7■□□□□ 0.1
CPSF3-201ENST00000238112 FAM53AQ6NSI3 398 aaPredicted RBP15.7■□□□□ 0.1
CPSF3-201ENST00000238112 DHRS13Q6UX07 377 aa15.7■□□□□ 0.1
CPSF3-201ENST00000238112 BTNL3Q6UXE8 466 aa15.7■□□□□ 0.1
CPSF3-201ENST00000238112 CYP2G1PQ6ZSU1 146 aa15.7■□□□□ 0.1
CPSF3-201ENST00000238112 OR10G9Q8NGN4 311 aa15.7■□□□□ 0.1
CPSF3-201ENST00000238112 OR10G7Q8NGN6 311 aa15.7■□□□□ 0.1
CPSF3-201ENST00000238112 MUC3AQ02505 3323 aa15.7■□□□□ 0.1
CPSF3-201ENST00000238112 C17orf98A8MV24 154 aa15.69■□□□□ 0.1
CPSF3-201ENST00000238112 ZG16O60844 167 aa15.69■□□□□ 0.1
CPSF3-201ENST00000238112 EIF4EBP1Q13541 118 aaPredicted RBP15.69■□□□□ 0.1
CPSF3-201ENST00000238112 H2BFWTQ7Z2G1 175 aa15.69■□□□□ 0.1
CPSF3-201ENST00000238112 RPUSD4Q96CM3 377 aaKnown RBP15.69■□□□□ 0.1
CPSF3-201ENST00000238112 CIB3Q96Q77 187 aaPredicted RBP15.69■□□□□ 0.1
CPSF3-201ENST00000238112 TRBV23-1A0A0A0MS06 115 aa15.69■□□□□ 0.1
CPSF3-201ENST00000238112 MLNRO43193 412 aa15.69■□□□□ 0.1
CPSF3-201ENST00000238112 KBTBD11O94819 623 aa15.69■□□□□ 0.1
CPSF3-201ENST00000238112 CLDN14O95500 239 aa15.69■□□□□ 0.1
CPSF3-201ENST00000238112 PTBP3O95758 552 aaKnown RBP15.69■□□□□ 0.1
CPSF3-201ENST00000238112 RD3LP0DJH9 198 aa15.69■□□□□ 0.1
CPSF3-201ENST00000238112 HOXC12P31275 282 aa15.69■□□□□ 0.1
CPSF3-201ENST00000238112 FFAR4Q5NUL3 377 aa15.69■□□□□ 0.1
CPSF3-201ENST00000238112 TMPRSS7Q7RTY8 843 aa15.69■□□□□ 0.1
CPSF3-201ENST00000238112 CXXC4Q9H2H0 198 aa15.69■□□□□ 0.1
CPSF3-201ENST00000238112 COL6A3P12111 3177 aa15.69■□□□□ 0.1
CPSF3-201ENST00000238112 TMEM250H0YL14 139 aa15.68■□□□□ 0.1
CPSF3-201ENST00000238112 RAB29O14966 203 aa15.68■□□□□ 0.1
CPSF3-201ENST00000238112 TCTEX1D1Q8N7M0 179 aa15.68■□□□□ 0.1
CPSF3-201ENST00000238112 ZNF709Q8N972 641 aa15.68■□□□□ 0.1
CPSF3-201ENST00000238112 ZDHHC16Q969W1 377 aa15.68■□□□□ 0.1
CPSF3-201ENST00000238112 COQ2Q96H96 371 aa15.68■□□□□ 0.1
CPSF3-201ENST00000238112 TAAR6Q96RI8 345 aa15.68■□□□□ 0.1
CPSF3-201ENST00000238112 ACTR3CQ9C0K3 210 aaPredicted RBP15.68■□□□□ 0.1
CPSF3-201ENST00000238112 LAMP3Q9UQV4 416 aa15.68■□□□□ 0.1
CPSF3-201ENST00000238112 KIAA2026Q5HYC2 2103 aa15.68■□□□□ 0.1
CPSF3-201ENST00000238112 CHD3Q12873 2000 aaKnown RBP15.68■□□□□ 0.1
CPSF3-201ENST00000238112 COX5AP20674 150 aa15.68■□□□□ 0.1
CPSF3-201ENST00000238112 PMP22Q01453 160 aa15.68■□□□□ 0.1
CPSF3-201ENST00000238112 TLE1Q04724 770 aa15.68■□□□□ 0.1
CPSF3-201ENST00000238112 ACP7Q6ZNF0 438 aa15.68■□□□□ 0.1
CPSF3-201ENST00000238112 ZNF383Q8NA42 475 aa15.68■□□□□ 0.1
CPSF3-201ENST00000238112 PFDN5Q99471 154 aa15.68■□□□□ 0.1
CPSF3-201ENST00000238112 MANBALQ9NQG1 85 aa15.68■□□□□ 0.1
CPSF3-201ENST00000238112 OR5H1A6NKK0 313 aa15.67■□□□□ 0.1
CPSF3-201ENST00000238112 PMS2P5A8MQ11 134 aa15.67■□□□□ 0.1
CPSF3-201ENST00000238112 HOXA4Q00056 320 aaPredicted RBP15.67■□□□□ 0.1
CPSF3-201ENST00000238112 BSXQ3C1V8 233 aa15.67■□□□□ 0.1
CPSF3-201ENST00000238112 HES3Q5TGS1 186 aa15.67■□□□□ 0.1
CPSF3-201ENST00000238112 Q6ZT83 130 aa15.67■□□□□ 0.1
CPSF3-201ENST00000238112 FAM214BQ7L5A3 538 aa15.67■□□□□ 0.1
CPSF3-201ENST00000238112 C16orf82Q7Z2V1 217 aa15.67■□□□□ 0.1
CPSF3-201ENST00000238112 LURAP1LQ8IV03 231 aa15.67■□□□□ 0.1
CPSF3-201ENST00000238112 C11orf53Q8IXP5 236 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms