RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 TMEM170AQ8WVE7 144 aa11.92□□□□□ -0.5
HCFC2-201ENST00000229330 PRNDQ9UKY0 176 aa11.92□□□□□ -0.5
HCFC2-201ENST00000229330 A0A1B0GV72 72 aa11.92□□□□□ -0.5
HCFC2-201ENST00000229330 ZNF785A8K8V0 405 aa11.92□□□□□ -0.5
HCFC2-201ENST00000229330 FGF12P61328 243 aa11.92□□□□□ -0.5
HCFC2-201ENST00000229330 LYZP61626 148 aa11.92□□□□□ -0.5
HCFC2-201ENST00000229330 CARFQ8N187 725 aa11.92□□□□□ -0.5
HCFC2-201ENST00000229330 CDIPTO14735 213 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 ABHD3Q8WU67 409 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 CXXC4Q9H2H0 198 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 PILRAQ9UKJ1 303 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 CLDN16Q9Y5I7 305 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 LHFPL6Q9Y693 200 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 TDRD15B5MCY1 1934 aaKnown RBP11.91□□□□□ -0.5
HCFC2-201ENST00000229330 HLA-DRB1P01911 266 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 WNT5AP41221 380 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 C14orf144Q96I85 54 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 UCN2Q96RP3 112 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 RASL10BQ96S79 203 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 GDF15Q99988 308 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 WNT10AQ9GZT5 417 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 OR4C46A6NHA9 309 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 TMEM229AB2RXF0 380 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 SPRY3O43610 288 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 GREM1O60565 184 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 ICAM4Q14773 271 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 FXYD3Q14802 87 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 PERPQ96FX8 193 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 FAM90A10PA6NDY2 464 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 FAM90A18PA6NE21 464 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 FAM90A16PA6NEW6 464 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 FAM90A20PA6NIJ5 464 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 FAM90A8PA6NJQ4 464 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 FAM90A7PA6NKC0 464 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 FAM90A22PA8MWA6 464 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 FAM90A12PA8MX19 464 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 FAM90A5PA8MXJ8 464 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 FAM90A23PA8MXZ1 464 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 H3BVH4 76 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 FAM90A15PP0C7V4 464 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 FAM90A13PP0C7W8 464 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 FAM90A14PP0C7W9 464 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 FAM90A24PP0C7X0 464 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 RPL7P18124 248 aaKnown RBP11.91□□□□□ -0.5
HCFC2-201ENST00000229330 SRSF9Q13242 221 aaKnown RBP eCLIP11.91□□□□□ -0.5
HCFC2-201ENST00000229330 P2RY6Q15077 328 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 CDX2Q99626 313 aaPredicted RBP11.91□□□□□ -0.5
HCFC2-201ENST00000229330 TBL2Q9Y4P3 447 aaKnown RBP11.91□□□□□ -0.5
HCFC2-201ENST00000229330 A0A1W2PQF6 199 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 B4E171 279 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 FAM27BQ5VT28 67 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 FGFRL1Q8N441 504 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 OR2Y1Q8NGV0 311 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 SEBOXQ9HB31 216 aaPredicted RBP11.91□□□□□ -0.5
HCFC2-201ENST00000229330 TMEM140Q9NV12 185 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 LAMTOR2Q9Y2Q5 125 aa11.91□□□□□ -0.5
HCFC2-201ENST00000229330 SPINT1O43278 529 aa11.9□□□□□ -0.5
HCFC2-201ENST00000229330 ARL14EPLP0DKL9 152 aa11.9□□□□□ -0.5
HCFC2-201ENST00000229330 TRA2AQ13595 282 aaKnown RBP eCLIP11.9□□□□□ -0.5
HCFC2-201ENST00000229330 MTURNQ8N3F0 131 aa11.9□□□□□ -0.5
HCFC2-201ENST00000229330 OR2M3Q8NG83 312 aa11.9□□□□□ -0.5
HCFC2-201ENST00000229330 PMCHL2Q9BQD1 86 aa11.9□□□□□ -0.5
HCFC2-201ENST00000229330 SPTBP11277 2137 aa11.9□□□□□ -0.5
HCFC2-201ENST00000229330 IL11RAQ14626 422 aa11.9□□□□□ -0.5
HCFC2-201ENST00000229330 PYY3Q5JQD4 70 aa11.9□□□□□ -0.5
HCFC2-201ENST00000229330 GFI1BQ5VTD9 330 aa11.9□□□□□ -0.5
HCFC2-201ENST00000229330 MIC13Q5XKP0 118 aa11.9□□□□□ -0.5
HCFC2-201ENST00000229330 SLC25A47Q6Q0C1 308 aa11.9□□□□□ -0.5
HCFC2-201ENST00000229330 ZNF818PQ6ZRF7 136 aa11.9□□□□□ -0.5
HCFC2-201ENST00000229330 LSM10Q969L4 123 aaKnown RBP11.9□□□□□ -0.5
HCFC2-201ENST00000229330 PAXXQ9BUH6 204 aa11.9□□□□□ -0.5
HCFC2-201ENST00000229330 GPR35Q9HC97 309 aa11.9□□□□□ -0.5
HCFC2-201ENST00000229330 ZNF735P0CB33 412 aa11.9□□□□□ -0.5
HCFC2-201ENST00000229330 GZMHP20718 246 aa11.9□□□□□ -0.5
HCFC2-201ENST00000229330 MOB3BQ86TA1 216 aa11.9□□□□□ -0.5
HCFC2-201ENST00000229330 C1orf210Q8IVY1 113 aa11.9□□□□□ -0.5
HCFC2-201ENST00000229330 ZNF385AQ96PM9 386 aaKnown RBP11.9□□□□□ -0.5
HCFC2-201ENST00000229330 KNTC1P50748 2209 aa11.9□□□□□ -0.5
HCFC2-201ENST00000229330 MS4A18H0YCH9 400 aa11.9□□□□□ -0.5
HCFC2-201ENST00000229330 MS4A18Q3C1V0 323 aa11.9□□□□□ -0.5
HCFC2-201ENST00000229330 FAM216AQ8WUB2 273 aa11.9□□□□□ -0.5
HCFC2-201ENST00000229330 SPSB4Q96A44 273 aa11.9□□□□□ -0.5
HCFC2-201ENST00000229330 C2orf88Q9BSF0 95 aa11.9□□□□□ -0.5
HCFC2-201ENST00000229330 M0R296 226 aa11.89□□□□□ -0.51
HCFC2-201ENST00000229330 EGR1P18146 543 aa11.89□□□□□ -0.51
HCFC2-201ENST00000229330 ZNF638Q14966 1978 aaKnown RBP11.89□□□□□ -0.51
HCFC2-201ENST00000229330 SYNGR1O43759 233 aa11.89□□□□□ -0.51
HCFC2-201ENST00000229330 VSTM2AQ8TAG5 236 aa11.89□□□□□ -0.51
HCFC2-201ENST00000229330 ZNF488Q96MN9 340 aa11.89□□□□□ -0.51
HCFC2-201ENST00000229330 FOXD3Q9UJU5 478 aaPredicted RBP11.89□□□□□ -0.51
HCFC2-201ENST00000229330 MAS1LP35410 378 aa11.89□□□□□ -0.51
HCFC2-201ENST00000229330 CTHRC1Q96CG8 243 aa11.89□□□□□ -0.51
HCFC2-201ENST00000229330 FZR1Q9UM11 496 aa11.89□□□□□ -0.51
HCFC2-201ENST00000229330 RHBDD2Q6NTF9 364 aa11.89□□□□□ -0.51
HCFC2-201ENST00000229330 SARAFQ96BY9 339 aa11.89□□□□□ -0.51
HCFC2-201ENST00000229330 GFI1Q99684 422 aa11.89□□□□□ -0.51
HCFC2-201ENST00000229330 GAL3ST2Q9H3Q3 398 aa11.89□□□□□ -0.51
HCFC2-201ENST00000229330 LOC101059948A0A1B0GTJ6 334 aa11.88□□□□□ -0.51
HCFC2-201ENST00000229330 LOC389332A0A1B0GUA5 103 aa11.88□□□□□ -0.51
HCFC2-201ENST00000229330 A0A1W2PPE3 182 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms