RNA–Protein interactions for RNA: ENST00000639002.1

CD44-239, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 528 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-239ENST00000639002 OR51D1Q8NGF3 324 aa1.38□□□□□ -2.19
CD44-239ENST00000639002 OR5K1Q8NHB7 308 aa1.38□□□□□ -2.19
CD44-239ENST00000639002 JOSD2Q8TAC2 188 aa1.38□□□□□ -2.19
CD44-239ENST00000639002 SLC37A2Q8TED4 501 aa1.38□□□□□ -2.19
CD44-239ENST00000639002 ORAOV1Q8WV07 137 aa1.38□□□□□ -2.19
CD44-239ENST00000639002 RASSF5Q8WWW0 418 aa1.38□□□□□ -2.19
CD44-239ENST00000639002 ASB17Q8WXJ9 295 aa1.38□□□□□ -2.19
CD44-239ENST00000639002 GHSRQ92847 366 aa1.38□□□□□ -2.19
CD44-239ENST00000639002 FAM19A4Q96LR4 140 aa1.38□□□□□ -2.19
CD44-239ENST00000639002 YPEL4Q96NS1 127 aa1.38□□□□□ -2.19
CD44-239ENST00000639002 OR2A7Q96R45 310 aa1.38□□□□□ -2.19
CD44-239ENST00000639002 KLF6Q99612 283 aaPredicted RBP1.38□□□□□ -2.19
CD44-239ENST00000639002 CHCHD7Q9BUK0 85 aa1.38□□□□□ -2.19
CD44-239ENST00000639002 CHST5Q9GZS9 411 aa1.38□□□□□ -2.19
CD44-239ENST00000639002 OR51E2Q9H255 320 aa1.38□□□□□ -2.19
CD44-239ENST00000639002 TXNIPQ9H3M7 391 aa1.38□□□□□ -2.19
CD44-239ENST00000639002 UBQLN4Q9NRR5 601 aa1.38□□□□□ -2.19
CD44-239ENST00000639002 TMEM216Q9P0N5 145 aa1.38□□□□□ -2.19
CD44-239ENST00000639002 DOK5Q9P104 306 aa1.38□□□□□ -2.19
CD44-239ENST00000639002 DKKL1Q9UK85 242 aa1.38□□□□□ -2.19
CD44-239ENST00000639002 C14orf166Q9Y224 244 aaKnown RBP1.38□□□□□ -2.19
CD44-239ENST00000639002 ANGPT4Q9Y264 503 aa1.38□□□□□ -2.19
CD44-239ENST00000639002 SZT2Q5T011 3432 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 CAMSAP1Q5T5Y3 1602 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 TRAV8-3A0A0A6YYJ7 113 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 IGHV1-3A0A0C4DH29 117 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 IGKV1-8A0A0C4DH67 115 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 C5orf49A4QMS7 147 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 SMIM9A6NGZ8 99 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 DISC1C4P0D8 188 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 M0QYV0 167 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 CHP2O43745 196 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 COX7A2P2O60397 106 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 CCDC22O60826 627 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 PDCD6O75340 191 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 SERPINB7O75635 380 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 IFNA21P01568 189 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 IGLV3-25P01717 112 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 CRYBA1P05813 215 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 CD36P16671 472 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 MIPP30301 263 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 POLR2IP36954 125 aaKnown RBP1.37□□□□□ -2.19
CD44-239ENST00000639002 MPV17P39210 176 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 NUDT2P50583 147 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 CDK9P50750 372 aaKnown RBP1.37□□□□□ -2.19
CD44-239ENST00000639002 TCTAP57738 103 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 PSME3P61289 254 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 DAD1P61803 113 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 PPP1CAP62136 330 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 RANP62826 216 aaKnown RBP1.37□□□□□ -2.19
CD44-239ENST00000639002 GRB2P62993 217 aaKnown RBP1.37□□□□□ -2.19
CD44-239ENST00000639002 HIST1H3AP68431 136 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 H3F3AP84243 136 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 TFAMQ00059 246 aaKnown RBP1.37□□□□□ -2.19
CD44-239ENST00000639002 SKP2Q13309 424 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 BTN1A1Q13410 526 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 TSNQ15631 228 aaKnown RBP1.37□□□□□ -2.19
CD44-239ENST00000639002 LRRC26Q2I0M4 334 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 LRRC75BQ2VPJ9 315 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 FBXL19-AS1Q494R0 122 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 KLHL12Q53G59 568 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 ACSBG2Q5FVE4 666 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 C3orf33Q6P1S2 294 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 ZBTB8OSQ8IWT0 167 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 MUC15Q8N387 334 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 ZNF645Q8N7E2 425 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 GPR32P1Q8NGA4 272 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 OR11L1Q8NGX0 322 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 OR10D3Q8NH80 312 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 Q8WTZ3 238 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 CLDN23Q96B33 292 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 BORCS7Q96B45 105 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 TAMM41Q96BW9 452 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 ACY3Q96HD9 319 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 FMC1Q96HJ9 113 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 SLC35G5Q96KT7 338 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 OR4K3Q96R72 315 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 OR52E6Q96RD3 313 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 SIGMAR1Q99720 223 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 NIPSNAP1Q9BPW8 284 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 MARVELD1Q9BSK0 173 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 ULBP3Q9BZM4 244 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 C6orf62Q9GZU0 229 aaPredicted RBP1.37□□□□□ -2.19
CD44-239ENST00000639002 PCBD2Q9H0N5 130 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 OR51I1Q9H343 314 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 METTL17Q9H7H0 456 aaPredicted RBP1.37□□□□□ -2.19
CD44-239ENST00000639002 VSIRQ9H7M9 311 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 HES4Q9HCC6 221 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 ENY2Q9NPA8 101 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 XPNPEP1Q9NQW7 623 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 PARP11Q9NR21 331 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 POMPQ9Y244 141 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 FAM32AQ9Y421 112 aaKnown RBP1.37□□□□□ -2.19
CD44-239ENST00000639002 RGS12O14924 1447 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 TSPOAP1O95153 1857 aa1.37□□□□□ -2.19
CD44-239ENST00000639002 MIA3Q5JRA6 1907 aa1.36□□□□□ -2.19
CD44-239ENST00000639002 ARHGEF11O15085 1522 aa1.36□□□□□ -2.19
CD44-239ENST00000639002 HMGXB3Q12766 1538 aa1.36□□□□□ -2.19
CD44-239ENST00000639002 TRIP11Q15643 1979 aa1.36□□□□□ -2.19
CD44-239ENST00000639002 CELSR3Q9NYQ7 3312 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms