RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 DEFB136Q30KP8 78 aa13.44□□□□□ -0.26
HMGN3-203ENST00000620514 CXorf66Q5JRM2 361 aaPredicted RBP13.44□□□□□ -0.26
HMGN3-203ENST00000620514 PLAC9Q5JTB6 97 aa13.44□□□□□ -0.26
HMGN3-203ENST00000620514 FAM131AQ6UXB0 335 aa13.44□□□□□ -0.26
HMGN3-203ENST00000620514 GLDNQ6ZMI3 551 aaPredicted RBP13.44□□□□□ -0.26
HMGN3-203ENST00000620514 ZNF367Q7RTV3 350 aa13.44□□□□□ -0.26
HMGN3-203ENST00000620514 ABHD14BQ96IU4 210 aa13.44□□□□□ -0.26
HMGN3-203ENST00000620514 KCTD7Q96MP8 289 aa13.44□□□□□ -0.26
HMGN3-203ENST00000620514 GON7Q9BXV9 100 aa13.44□□□□□ -0.26
HMGN3-203ENST00000620514 RIMS4Q9H426 269 aaPredicted RBP13.44□□□□□ -0.26
HMGN3-203ENST00000620514 ACOT13Q9NPJ3 140 aa13.44□□□□□ -0.26
HMGN3-203ENST00000620514 SLC23A1Q9UHI7 598 aa13.44□□□□□ -0.26
HMGN3-203ENST00000620514 HSF4Q9ULV5 492 aa13.44□□□□□ -0.26
HMGN3-203ENST00000620514 TMEM272A0A1B0GTI8 110 aa13.43□□□□□ -0.26
HMGN3-203ENST00000620514 WI2-2373I1.2A0A1W2PRP0 233 aa13.43□□□□□ -0.26
HMGN3-203ENST00000620514 LDLRAD4O15165 306 aa13.43□□□□□ -0.26
HMGN3-203ENST00000620514 NBR2O15453 112 aa13.43□□□□□ -0.26
HMGN3-203ENST00000620514 IGHG4P01861 327 aa13.43□□□□□ -0.26
HMGN3-203ENST00000620514 IGF1P05019 195 aa13.43□□□□□ -0.26
HMGN3-203ENST00000620514 ELANEP08246 267 aa13.43□□□□□ -0.26
HMGN3-203ENST00000620514 SCTP09683 121 aa13.43□□□□□ -0.26
HMGN3-203ENST00000620514 CT45A6P0DMU7 189 aa13.43□□□□□ -0.26
HMGN3-203ENST00000620514 CT45A5P0DMU8 189 aa13.43□□□□□ -0.26
HMGN3-203ENST00000620514 CT45A7P0DMV0 189 aa13.43□□□□□ -0.26
HMGN3-203ENST00000620514 VDAC1P21796 283 aa13.43□□□□□ -0.26
HMGN3-203ENST00000620514 OR10A3P58181 314 aa13.43□□□□□ -0.26
HMGN3-203ENST00000620514 RNF152Q8N8N0 203 aa13.43□□□□□ -0.26
HMGN3-203ENST00000620514 Q9N2K0 584 aa13.43□□□□□ -0.26
HMGN3-203ENST00000620514 PIPOXQ9P0Z9 390 aa13.43□□□□□ -0.26
HMGN3-203ENST00000620514 WSB1Q9Y6I7 421 aa13.43□□□□□ -0.26
HMGN3-203ENST00000620514 IGHV7-81A0A0B4J1V7 117 aa13.42□□□□□ -0.26
HMGN3-203ENST00000620514 G3V318 75 aa13.42□□□□□ -0.26
HMGN3-203ENST00000620514 CCL24O00175 119 aa13.42□□□□□ -0.26
HMGN3-203ENST00000620514 RAB29O14966 203 aa13.42□□□□□ -0.26
HMGN3-203ENST00000620514 ATP6V0E1O15342 81 aa13.42□□□□□ -0.26
HMGN3-203ENST00000620514 DENRO43583 198 aaKnown RBP13.42□□□□□ -0.26
HMGN3-203ENST00000620514 CEACAM6P40199 344 aa13.42□□□□□ -0.26
HMGN3-203ENST00000620514 RAB25P57735 213 aa13.42□□□□□ -0.26
HMGN3-203ENST00000620514 EGFEM1PQ0D2K5 195 aa13.42□□□□□ -0.26
HMGN3-203ENST00000620514 C5orf64Q2M2E5 130 aa13.42□□□□□ -0.26
HMGN3-203ENST00000620514 FAM71F2Q6NXP2 309 aa13.42□□□□□ -0.26
HMGN3-203ENST00000620514 OR56B1Q8NGI3 324 aa13.42□□□□□ -0.26
HMGN3-203ENST00000620514 CMSS1Q9BQ75 279 aaKnown RBP13.42□□□□□ -0.26
HMGN3-203ENST00000620514 AGMATQ9BSE5 352 aa13.42□□□□□ -0.26
HMGN3-203ENST00000620514 C11orf54Q9H0W9 315 aaPredicted RBP13.42□□□□□ -0.26
HMGN3-203ENST00000620514 C12orf4Q9NQ89 552 aa13.42□□□□□ -0.26
HMGN3-203ENST00000620514 ZNF580Q9UK33 172 aa13.42□□□□□ -0.26
HMGN3-203ENST00000620514 BLOC1S6Q9UL45 172 aa13.42□□□□□ -0.26
HMGN3-203ENST00000620514 RAB26Q9ULW5 256 aa13.42□□□□□ -0.26
HMGN3-203ENST00000620514 IGKV1-6A0A0C4DH72 117 aa13.41□□□□□ -0.26
HMGN3-203ENST00000620514 HSPA12AO43301 675 aa13.41□□□□□ -0.26
HMGN3-203ENST00000620514 NDUFA3O95167 84 aa13.41□□□□□ -0.26
HMGN3-203ENST00000620514 HLA-DRB1P01911 266 aa13.41□□□□□ -0.26
HMGN3-203ENST00000620514 PSMB8P28062 276 aa13.41□□□□□ -0.26
HMGN3-203ENST00000620514 PPIFP30405 207 aaKnown RBP13.41□□□□□ -0.26
HMGN3-203ENST00000620514 CDX1P47902 265 aaPredicted RBP13.41□□□□□ -0.26
HMGN3-203ENST00000620514 MOGAT2Q3SYC2 334 aa13.41□□□□□ -0.26
HMGN3-203ENST00000620514 NPBQ8NG41 125 aa13.41□□□□□ -0.26
HMGN3-203ENST00000620514 KLK15Q9H2R5 256 aa13.41□□□□□ -0.26
HMGN3-203ENST00000620514 OR51J1Q9H342 316 aa13.41□□□□□ -0.26
HMGN3-203ENST00000620514 PARP11Q9NR21 331 aa13.41□□□□□ -0.26
HMGN3-203ENST00000620514 NDUFB11Q9NX14 153 aa13.41□□□□□ -0.26
HMGN3-203ENST00000620514 RNF150Q9ULK6 438 aa13.41□□□□□ -0.26
HMGN3-203ENST00000620514 KCNK7Q9Y2U2 307 aa13.41□□□□□ -0.26
HMGN3-203ENST00000620514 A0A0B4J203 849 aa13.4□□□□□ -0.26
HMGN3-203ENST00000620514 H0YJW9 148 aa13.4□□□□□ -0.26
HMGN3-203ENST00000620514 ITGB1BP1O14713 200 aa13.4□□□□□ -0.26
HMGN3-203ENST00000620514 PROP1O75360 226 aa13.4□□□□□ -0.26
HMGN3-203ENST00000620514 ATP6V1G2O95670 118 aa13.4□□□□□ -0.26
HMGN3-203ENST00000620514 ZBTB25P24278 435 aa13.4□□□□□ -0.26
HMGN3-203ENST00000620514 PSMD7P51665 324 aa13.4□□□□□ -0.26
HMGN3-203ENST00000620514 NDPQ00604 133 aa13.4□□□□□ -0.26
HMGN3-203ENST00000620514 KIR2DS1Q14954 304 aa13.4□□□□□ -0.26
HMGN3-203ENST00000620514 LIN54Q6MZP7 749 aa13.4□□□□□ -0.26
HMGN3-203ENST00000620514 CD200R1LQ6Q8B3 271 aa13.4□□□□□ -0.26
HMGN3-203ENST00000620514 DRAXINQ8NBI3 349 aaPredicted RBP13.4□□□□□ -0.26
HMGN3-203ENST00000620514 FBXL15Q9H469 300 aa13.4□□□□□ -0.26
HMGN3-203ENST00000620514 RAB22AQ9UL26 194 aa13.4□□□□□ -0.26
HMGN3-203ENST00000620514 MGAT4AQ9UM21 535 aa13.4□□□□□ -0.26
HMGN3-203ENST00000620514 TRAV1-2A0A0B4J238 106 aa13.39□□□□□ -0.27
HMGN3-203ENST00000620514 TRDV1A0A1B0GX56 115 aa13.39□□□□□ -0.27
HMGN3-203ENST00000620514 PDCD5O14737 125 aa13.39□□□□□ -0.27
HMGN3-203ENST00000620514 OR5H8P0DN80 308 aa13.39□□□□□ -0.27
HMGN3-203ENST00000620514 SNRPBP14678 240 aaKnown RBP13.39□□□□□ -0.27
HMGN3-203ENST00000620514 LINC00205P59089 165 aa13.39□□□□□ -0.27
HMGN3-203ENST00000620514 KIAA0141Q14154 515 aaPredicted RBP13.39□□□□□ -0.27
HMGN3-203ENST00000620514 OR8U1Q8NH10 309 aa13.39□□□□□ -0.27
HMGN3-203ENST00000620514 MYOZ3Q8TDC0 251 aa13.39□□□□□ -0.27
HMGN3-203ENST00000620514 EDARADDQ8WWZ3 215 aa13.39□□□□□ -0.27
HMGN3-203ENST00000620514 DPF1Q92782 380 aa13.39□□□□□ -0.27
HMGN3-203ENST00000620514 MCRIP2Q9BUT9 160 aaKnown RBP13.39□□□□□ -0.27
HMGN3-203ENST00000620514 GPR61Q9BZJ8 451 aa13.39□□□□□ -0.27
HMGN3-203ENST00000620514 KIAA1456Q9P272 454 aa13.39□□□□□ -0.27
HMGN3-203ENST00000620514 FBXO7Q9Y3I1 522 aa13.39□□□□□ -0.27
HMGN3-203ENST00000620514 TRAV41A0A0B4J266 112 aa13.38□□□□□ -0.27
HMGN3-203ENST00000620514 OR5H14A6NHG9 310 aa13.38□□□□□ -0.27
HMGN3-203ENST00000620514 IFITM5A6NNB3 132 aa13.38□□□□□ -0.27
HMGN3-203ENST00000620514 TRDCB7Z8K6 153 aa13.38□□□□□ -0.27
HMGN3-203ENST00000620514 H7C2Y5 167 aa13.38□□□□□ -0.27
HMGN3-203ENST00000620514 FCN1O00602 326 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms