RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 CD82P27701 267 aa14.48□□□□□ -0.09
NEK3-206ENST00000611833 RPS10P46783 165 aaKnown RBP14.48□□□□□ -0.09
NEK3-206ENST00000611833 SERF2P84101 59 aa14.48□□□□□ -0.09
NEK3-206ENST00000611833 OR8G2PQ6IF36 304 aa14.48□□□□□ -0.09
NEK3-206ENST00000611833 VWA1Q6PCB0 445 aa14.48□□□□□ -0.09
NEK3-206ENST00000611833 YPEL4Q96NS1 127 aa14.48□□□□□ -0.09
NEK3-206ENST00000611833 CXXC4Q9H2H0 198 aa14.48□□□□□ -0.09
NEK3-206ENST00000611833 ZFHX4Q86UP3 3567 aa14.48□□□□□ -0.09
NEK3-206ENST00000611833 A0A087WWC5 75 aa14.47□□□□□ -0.09
NEK3-206ENST00000611833 HBZP02008 142 aa14.47□□□□□ -0.09
NEK3-206ENST00000611833 OR8U8P0C7N1 319 aa14.47□□□□□ -0.09
NEK3-206ENST00000611833 NQO2P16083 231 aa14.47□□□□□ -0.09
NEK3-206ENST00000611833 WT1P19544 449 aaPredicted RBP14.47□□□□□ -0.09
NEK3-206ENST00000611833 KIR2DL2P43627 348 aaPredicted RBP14.47□□□□□ -0.09
NEK3-206ENST00000611833 GABRA2P47869 451 aa14.47□□□□□ -0.09
NEK3-206ENST00000611833 RAB11AP62491 216 aa14.47□□□□□ -0.09
NEK3-206ENST00000611833 ZNF816Q0VGE8 651 aaPredicted RBP14.47□□□□□ -0.09
NEK3-206ENST00000611833 MSMO1Q15800 293 aa14.47□□□□□ -0.09
NEK3-206ENST00000611833 SLC35E4Q6ICL7 350 aa14.47□□□□□ -0.09
NEK3-206ENST00000611833 RBMS3Q6XE24 437 aaKnown RBP14.47□□□□□ -0.09
NEK3-206ENST00000611833 SLC35E3Q7Z769 313 aa14.47□□□□□ -0.09
NEK3-206ENST00000611833 PIP4P1Q86T03 277 aa14.47□□□□□ -0.09
NEK3-206ENST00000611833 OR4C12Q96R67 309 aa14.47□□□□□ -0.09
NEK3-206ENST00000611833 WDR61Q9GZS3 305 aaKnown RBP14.47□□□□□ -0.09
NEK3-206ENST00000611833 RBKSQ9H477 322 aa14.47□□□□□ -0.09
NEK3-206ENST00000611833 GTF3C1Q12789 2109 aa14.47□□□□□ -0.09
NEK3-206ENST00000611833 TIMM8AO60220 97 aaPredicted RBP14.47□□□□□ -0.09
NEK3-206ENST00000611833 HOXB1P14653 301 aaPredicted RBP14.47□□□□□ -0.09
NEK3-206ENST00000611833 G6PCP35575 357 aa14.47□□□□□ -0.09
NEK3-206ENST00000611833 FGF8P55075 233 aaPredicted RBP14.47□□□□□ -0.09
NEK3-206ENST00000611833 TNFRSF9Q07011 255 aa14.47□□□□□ -0.09
NEK3-206ENST00000611833 SLC38A11Q08AI6 406 aa14.47□□□□□ -0.09
NEK3-206ENST00000611833 FAM53AQ6NSI3 398 aaPredicted RBP14.47□□□□□ -0.09
NEK3-206ENST00000611833 C11orf53Q8IXP5 236 aa14.47□□□□□ -0.09
NEK3-206ENST00000611833 MRGPRDQ8TDS7 321 aa14.47□□□□□ -0.09
NEK3-206ENST00000611833 ZNF665Q9H7R5 613 aa14.47□□□□□ -0.09
NEK3-206ENST00000611833 UFSP2Q9NUQ7 469 aa14.47□□□□□ -0.09
NEK3-206ENST00000611833 FZR1Q9UM11 496 aa14.47□□□□□ -0.09
NEK3-206ENST00000611833 UBE2L5PA0A1B0GUS4 154 aa14.46□□□□□ -0.09
NEK3-206ENST00000611833 ATXN7O15265 892 aaPredicted RBP14.46□□□□□ -0.09
NEK3-206ENST00000611833 IGKV3-15P01624 115 aa14.46□□□□□ -0.09
NEK3-206ENST00000611833 BCL2P10415 239 aa14.46□□□□□ -0.09
NEK3-206ENST00000611833 ELLP55199 621 aaPredicted RBP14.46□□□□□ -0.09
NEK3-206ENST00000611833 CATR1Q13166 79 aa14.46□□□□□ -0.09
NEK3-206ENST00000611833 ZNF726P1Q15940 193 aa14.46□□□□□ -0.09
NEK3-206ENST00000611833 KIAA2026Q5HYC2 2103 aa14.46□□□□□ -0.09
NEK3-206ENST00000611833 PRAMEF6Q5VXH4 476 aa14.46□□□□□ -0.09
NEK3-206ENST00000611833 WDR31Q8NA23 367 aa14.46□□□□□ -0.09
NEK3-206ENST00000611833 C9orf106Q8NAJ2 232 aa14.46□□□□□ -0.09
NEK3-206ENST00000611833 DEFB124Q8NES8 71 aa14.46□□□□□ -0.09
NEK3-206ENST00000611833 OR10G4Q8NGN3 311 aa14.46□□□□□ -0.09
NEK3-206ENST00000611833 MBD3L1Q8WWY6 194 aa14.46□□□□□ -0.09
NEK3-206ENST00000611833 RCC1LQ96I51 464 aaKnown RBP14.46□□□□□ -0.09
NEK3-206ENST00000611833 CISD1Q9NZ45 108 aaKnown RBP14.46□□□□□ -0.09
NEK3-206ENST00000611833 URGCP-MRPS24S4R325 110 aa14.46□□□□□ -0.09
NEK3-206ENST00000611833 SPAARA0A1B0GVQ0 90 aa14.46□□□□□ -0.1
NEK3-206ENST00000611833 AP4M1O00189 453 aa14.46□□□□□ -0.1
NEK3-206ENST00000611833 PPIHO43447 177 aaKnown RBP14.46□□□□□ -0.1
NEK3-206ENST00000611833 IGHV2-5P01817 119 aa14.46□□□□□ -0.1
NEK3-206ENST00000611833 TFF1P04155 84 aa14.46□□□□□ -0.1
NEK3-206ENST00000611833 FABP6P51161 128 aa14.46□□□□□ -0.1
NEK3-206ENST00000611833 RPL30P62888 115 aaKnown RBP14.46□□□□□ -0.1
NEK3-206ENST00000611833 TMEM41BQ5BJD5 291 aa14.46□□□□□ -0.1
NEK3-206ENST00000611833 ACP7Q6ZNF0 438 aa14.46□□□□□ -0.1
NEK3-206ENST00000611833 C1QL4Q86Z23 238 aa14.46□□□□□ -0.1
NEK3-206ENST00000611833 NANPQ8TBE9 248 aa14.46□□□□□ -0.1
NEK3-206ENST00000611833 TCTEX1D2Q8WW35 142 aa14.46□□□□□ -0.1
NEK3-206ENST00000611833 ASCL3Q9NQ33 180 aa14.46□□□□□ -0.1
NEK3-206ENST00000611833 C1QTNF9BB2RNN3 333 aa14.45□□□□□ -0.1
NEK3-206ENST00000611833 FTH1P19P0C7X4 201 aa14.45□□□□□ -0.1
NEK3-206ENST00000611833 SMIM6P0DI80 62 aa14.45□□□□□ -0.1
NEK3-206ENST00000611833 COX5AP20674 150 aa14.45□□□□□ -0.1
NEK3-206ENST00000611833 ZNF343Q6P1L6 599 aa14.45□□□□□ -0.1
NEK3-206ENST00000611833 IGFL2Q6UWQ7 119 aa14.45□□□□□ -0.1
NEK3-206ENST00000611833 SSX7Q7RTT5 188 aa14.45□□□□□ -0.1
NEK3-206ENST00000611833 TAF15Q92804 592 aaKnown RBP eCLIP14.45□□□□□ -0.1
NEK3-206ENST00000611833 PINX1Q96BK5 328 aaKnown RBP14.45□□□□□ -0.1
NEK3-206ENST00000611833 SIRT7Q9NRC8 400 aa14.45□□□□□ -0.1
NEK3-206ENST00000611833 BTNL3Q6UXE8 466 aa14.44□□□□□ -0.1
NEK3-206ENST00000611833 WDR82Q6UXN9 313 aa14.44□□□□□ -0.1
NEK3-206ENST00000611833 TMEM14EPQ6UXP3 125 aa14.44□□□□□ -0.1
NEK3-206ENST00000611833 SLC16A13Q7RTY0 426 aa14.44□□□□□ -0.1
NEK3-206ENST00000611833 COQ2Q96H96 371 aa14.44□□□□□ -0.1
NEK3-206ENST00000611833 PARD6GQ9BYG4 376 aaPredicted RBP14.44□□□□□ -0.1
NEK3-206ENST00000611833 MSL2Q9HCI7 577 aa14.44□□□□□ -0.1
NEK3-206ENST00000611833 HSPB7Q9UBY9 170 aa14.44□□□□□ -0.1
NEK3-206ENST00000611833 AQP7O14520 342 aa14.44□□□□□ -0.1
NEK3-206ENST00000611833 S1PR2O95136 353 aa14.44□□□□□ -0.1
NEK3-206ENST00000611833 GLIPR1P48060 266 aa14.44□□□□□ -0.1
NEK3-206ENST00000611833 S100A12P80511 92 aa14.44□□□□□ -0.1
NEK3-206ENST00000611833 FOXF2Q12947 444 aa14.44□□□□□ -0.1
NEK3-206ENST00000611833 HNF4GQ14541 408 aa14.44□□□□□ -0.1
NEK3-206ENST00000611833 ELOBQ15370 118 aa14.44□□□□□ -0.1
NEK3-206ENST00000611833 Q6ZR03 302 aa14.44□□□□□ -0.1
NEK3-206ENST00000611833 Q8WTZ3 238 aa14.44□□□□□ -0.1
NEK3-206ENST00000611833 C5orf30Q96GV9 206 aa14.44□□□□□ -0.1
NEK3-206ENST00000611833 TCEAL7Q9BRU2 100 aa14.44□□□□□ -0.1
NEK3-206ENST00000611833 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.44□□□□□ -0.1
NEK3-206ENST00000611833 PRR14LQ5THK1 2151 aa14.44□□□□□ -0.1
NEK3-206ENST00000611833 CXorf65A6NEN9 183 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms