RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 CHPT1Q8WUD6 406 aa14.59□□□□□ -0.07
SHKBP1-202ENST00000593764 C11orf54Q9H0W9 315 aaPredicted RBP14.59□□□□□ -0.07
SHKBP1-202ENST00000593764 RNF167Q9H6Y7 350 aa14.59□□□□□ -0.07
SHKBP1-202ENST00000593764 PIPOXQ9P0Z9 390 aa14.59□□□□□ -0.07
SHKBP1-202ENST00000593764 TSSC4Q9Y5U2 329 aaPredicted RBP14.59□□□□□ -0.07
SHKBP1-202ENST00000593764 PRKDCP78527 4128 aaKnown RBP14.59□□□□□ -0.07
SHKBP1-202ENST00000593764 SERPINE3A8MV23 424 aa14.58□□□□□ -0.08
SHKBP1-202ENST00000593764 RAB29O14966 203 aa14.58□□□□□ -0.08
SHKBP1-202ENST00000593764 HIST1H1DP16402 221 aaKnown RBP14.58□□□□□ -0.08
SHKBP1-202ENST00000593764 GADD45AP24522 165 aa14.58□□□□□ -0.08
SHKBP1-202ENST00000593764 SDC2P34741 201 aa14.58□□□□□ -0.08
SHKBP1-202ENST00000593764 GPR12P47775 334 aa14.58□□□□□ -0.08
SHKBP1-202ENST00000593764 RPL39P5Q59GN2 51 aa14.58□□□□□ -0.08
SHKBP1-202ENST00000593764 FAM71F2Q6NXP2 309 aa14.58□□□□□ -0.08
SHKBP1-202ENST00000593764 C1QL4Q86Z23 238 aa14.58□□□□□ -0.08
SHKBP1-202ENST00000593764 OR4F17Q8NGA8 305 aa14.58□□□□□ -0.08
SHKBP1-202ENST00000593764 ABHD14BQ96IU4 210 aa14.58□□□□□ -0.08
SHKBP1-202ENST00000593764 OR4F4Q96R69 305 aa14.58□□□□□ -0.08
SHKBP1-202ENST00000593764 CHCHD6Q9BRQ6 235 aa14.58□□□□□ -0.08
SHKBP1-202ENST00000593764 METTL21EPA6NDL7 271 aa14.57□□□□□ -0.08
SHKBP1-202ENST00000593764 PROP1O75360 226 aa14.57□□□□□ -0.08
SHKBP1-202ENST00000593764 FCGR3AP08637 254 aa14.57□□□□□ -0.08
SHKBP1-202ENST00000593764 CD3GP09693 182 aa14.57□□□□□ -0.08
SHKBP1-202ENST00000593764 CLEC2LP0C7M8 214 aa14.57□□□□□ -0.08
SHKBP1-202ENST00000593764 CT45A6P0DMU7 189 aa14.57□□□□□ -0.08
SHKBP1-202ENST00000593764 CT45A5P0DMU8 189 aa14.57□□□□□ -0.08
SHKBP1-202ENST00000593764 CT45A7P0DMV0 189 aa14.57□□□□□ -0.08
SHKBP1-202ENST00000593764 CD36P16671 472 aa14.57□□□□□ -0.08
SHKBP1-202ENST00000593764 STPG2Q8N412 459 aa14.57□□□□□ -0.08
SHKBP1-202ENST00000593764 KCTD7Q96MP8 289 aa14.57□□□□□ -0.08
SHKBP1-202ENST00000593764 RASL11BQ9BPW5 248 aa14.57□□□□□ -0.08
SHKBP1-202ENST00000593764 HSPB9Q9BQS6 159 aa14.57□□□□□ -0.08
SHKBP1-202ENST00000593764 DAPK2Q9UIK4 370 aa14.57□□□□□ -0.08
SHKBP1-202ENST00000593764 ELF5Q9UKW6 265 aaPredicted RBP14.57□□□□□ -0.08
SHKBP1-202ENST00000593764 A0A075B6Q4 140 aa14.56□□□□□ -0.08
SHKBP1-202ENST00000593764 G3V4G9 280 aa14.56□□□□□ -0.08
SHKBP1-202ENST00000593764 HSPA12AO43301 675 aa14.56□□□□□ -0.08
SHKBP1-202ENST00000593764 CNTFRP26992 372 aa14.56□□□□□ -0.08
SHKBP1-202ENST00000593764 ACTBP60709 375 aa14.56□□□□□ -0.08
SHKBP1-202ENST00000593764 SFXN4Q6P4A7 337 aa14.56□□□□□ -0.08
SHKBP1-202ENST00000593764 FOXRED2Q8IWF2 684 aa14.56□□□□□ -0.08
SHKBP1-202ENST00000593764 OR4A4PQ8NGN8 299 aa14.56□□□□□ -0.08
SHKBP1-202ENST00000593764 EDARADDQ8WWZ3 215 aa14.56□□□□□ -0.08
SHKBP1-202ENST00000593764 CENPOQ9BU64 300 aa14.56□□□□□ -0.08
SHKBP1-202ENST00000593764 TOLLIPQ9H0E2 274 aa14.56□□□□□ -0.08
SHKBP1-202ENST00000593764 ATG5Q9H1Y0 275 aa14.56□□□□□ -0.08
SHKBP1-202ENST00000593764 GHITMQ9H3K2 345 aa14.56□□□□□ -0.08
SHKBP1-202ENST00000593764 ZNF230Q9UIE0 474 aaPredicted RBP14.56□□□□□ -0.08
SHKBP1-202ENST00000593764 LOC100506127A0A0U1RQW1 187 aa14.55□□□□□ -0.08
SHKBP1-202ENST00000593764 AP4M1O00189 453 aa14.55□□□□□ -0.08
SHKBP1-202ENST00000593764 FABP7O15540 132 aa14.55□□□□□ -0.08
SHKBP1-202ENST00000593764 GSTT2P0CG29 244 aa14.55□□□□□ -0.08
SHKBP1-202ENST00000593764 GSTT2BP0CG30 244 aa14.55□□□□□ -0.08
SHKBP1-202ENST00000593764 SNRPBP14678 240 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-202ENST00000593764 MRPS15P82914 257 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-202ENST00000593764 MXD1Q05195 221 aa14.55□□□□□ -0.08
SHKBP1-202ENST00000593764 MMDQ15546 238 aa14.55□□□□□ -0.08
SHKBP1-202ENST00000593764 IGSF11Q5DX21 431 aa14.55□□□□□ -0.08
SHKBP1-202ENST00000593764 SAMD5Q5TGI4 173 aa14.55□□□□□ -0.08
SHKBP1-202ENST00000593764 MAFIPQ8WZ33 124 aa14.55□□□□□ -0.08
SHKBP1-202ENST00000593764 CABLES2Q9BTV7 478 aa14.55□□□□□ -0.08
SHKBP1-202ENST00000593764 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.55□□□□□ -0.08
SHKBP1-202ENST00000593764 RDH8Q9NYR8 311 aa14.55□□□□□ -0.08
SHKBP1-202ENST00000593764 RNF150Q9ULK6 438 aa14.55□□□□□ -0.08
SHKBP1-202ENST00000593764 SOX6P35712 828 aa14.54□□□□□ -0.08
SHKBP1-202ENST00000593764 CDNFQ49AH0 187 aa14.54□□□□□ -0.08
SHKBP1-202ENST00000593764 FAM131AQ6UXB0 335 aa14.54□□□□□ -0.08
SHKBP1-202ENST00000593764 GLDNQ6ZMI3 551 aaPredicted RBP14.54□□□□□ -0.08
SHKBP1-202ENST00000593764 WFDC9Q8NEX5 89 aa14.54□□□□□ -0.08
SHKBP1-202ENST00000593764 NPBQ8NG41 125 aa14.54□□□□□ -0.08
SHKBP1-202ENST00000593764 OR5AN1Q8NGI8 311 aa14.54□□□□□ -0.08
SHKBP1-202ENST00000593764 DNAH3Q8TD57 4116 aa14.54□□□□□ -0.08
SHKBP1-202ENST00000593764 IGKV1D-8A0A087WSZ0 117 aa14.53□□□□□ -0.08
SHKBP1-202ENST00000593764 TRBV6-7A0A0A0MS04 114 aa14.53□□□□□ -0.08
SHKBP1-202ENST00000593764 H0YJW9 148 aa14.53□□□□□ -0.08
SHKBP1-202ENST00000593764 SERPINB10P48595 397 aa14.53□□□□□ -0.08
SHKBP1-202ENST00000593764 LINC00205P59089 165 aa14.53□□□□□ -0.08
SHKBP1-202ENST00000593764 KIR2DS1Q14954 304 aa14.53□□□□□ -0.08
SHKBP1-202ENST00000593764 SRSF7Q16629 238 aaKnown RBP eCLIP14.53□□□□□ -0.08
SHKBP1-202ENST00000593764 BEAN1Q3B7T3 259 aa14.53□□□□□ -0.08
SHKBP1-202ENST00000593764 PDLIM3Q53GG5 364 aaPredicted RBP14.53□□□□□ -0.08
SHKBP1-202ENST00000593764 KHDC1LQ5JSQ8 128 aa14.53□□□□□ -0.08
SHKBP1-202ENST00000593764 Q6ZS49 121 aa14.53□□□□□ -0.08
SHKBP1-202ENST00000593764 TSPAN14Q8NG11 270 aa14.53□□□□□ -0.08
SHKBP1-202ENST00000593764 LGALS14Q8TCE9 139 aa14.53□□□□□ -0.08
SHKBP1-202ENST00000593764 PHF21AQ96BD5 680 aa14.53□□□□□ -0.08
SHKBP1-202ENST00000593764 ZNF107Q9UII5 783 aaPredicted RBP14.53□□□□□ -0.08
SHKBP1-202ENST00000593764 A0A087WXM4 84 aa14.52□□□□□ -0.09
SHKBP1-202ENST00000593764 OR5H14A6NHG9 310 aa14.52□□□□□ -0.09
SHKBP1-202ENST00000593764 BET1O15155 118 aa14.52□□□□□ -0.09
SHKBP1-202ENST00000593764 NBR2O15453 112 aa14.52□□□□□ -0.09
SHKBP1-202ENST00000593764 NDUFA3O95167 84 aa14.52□□□□□ -0.09
SHKBP1-202ENST00000593764 TNFAIP8O95379 198 aa14.52□□□□□ -0.09
SHKBP1-202ENST00000593764 DIRAS3O95661 229 aa14.52□□□□□ -0.09
SHKBP1-202ENST00000593764 IGF1P05019 195 aa14.52□□□□□ -0.09
SHKBP1-202ENST00000593764 PF4V1P10720 104 aa14.52□□□□□ -0.09
SHKBP1-202ENST00000593764 RPL23AP62750 156 aaKnown RBP14.52□□□□□ -0.09
SHKBP1-202ENST00000593764 SLC35B1P78383 322 aa14.52□□□□□ -0.09
SHKBP1-202ENST00000593764 CFHR3Q02985 330 aa14.52□□□□□ -0.09
SHKBP1-202ENST00000593764 ARFRP1Q13795 201 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms