RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 MSANTD3Q96H12 275 aa1.05□□□□□ -2.24
SMCHD1-207ENST00000581711 TMEM56Q96MV1 263 aa1.05□□□□□ -2.24
SMCHD1-207ENST00000581711 FN1P02751 2386 aaKnown RBP1.05□□□□□ -2.24
SMCHD1-207ENST00000581711 CYTH3O43739 400 aa1.04□□□□□ -2.24
SMCHD1-207ENST00000581711 ADORA1P30542 326 aa1.04□□□□□ -2.24
SMCHD1-207ENST00000581711 DAPP51397 102 aa1.04□□□□□ -2.24
SMCHD1-207ENST00000581711 TMEM31Q5JXX7 168 aa1.04□□□□□ -2.24
SMCHD1-207ENST00000581711 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.04□□□□□ -2.24
SMCHD1-207ENST00000581711 TTC33Q6PID6 262 aaPredicted RBP1.04□□□□□ -2.24
SMCHD1-207ENST00000581711 Q6ZTI0 123 aa1.04□□□□□ -2.24
SMCHD1-207ENST00000581711 LRRC28Q86X40 367 aaPredicted RBP1.04□□□□□ -2.24
SMCHD1-207ENST00000581711 FNDC9Q8TBE3 224 aa1.04□□□□□ -2.24
SMCHD1-207ENST00000581711 ABHD14BQ96IU4 210 aa1.04□□□□□ -2.24
SMCHD1-207ENST00000581711 SERPINB11Q96P15 392 aa1.04□□□□□ -2.24
SMCHD1-207ENST00000581711 HSPB9Q9BQS6 159 aa1.04□□□□□ -2.24
SMCHD1-207ENST00000581711 MED28Q9H204 178 aa1.04□□□□□ -2.24
SMCHD1-207ENST00000581711 IGKV1D-43A0A0B4J1Z2 117 aa1.03□□□□□ -2.24
SMCHD1-207ENST00000581711 OR5K4A6NMS3 321 aa1.03□□□□□ -2.24
SMCHD1-207ENST00000581711 M0QYV0 167 aa1.03□□□□□ -2.24
SMCHD1-207ENST00000581711 STK16O75716 305 aa1.03□□□□□ -2.24
SMCHD1-207ENST00000581711 GP1BAP07359 652 aa1.03□□□□□ -2.24
SMCHD1-207ENST00000581711 SLC35E2BP0CK96 405 aa1.03□□□□□ -2.24
SMCHD1-207ENST00000581711 OR13C7P0DN81 318 aa1.03□□□□□ -2.24
SMCHD1-207ENST00000581711 NQO2P16083 231 aa1.03□□□□□ -2.24
SMCHD1-207ENST00000581711 NPPCP23582 126 aa1.03□□□□□ -2.24
SMCHD1-207ENST00000581711 MAGEA12P43365 314 aa1.03□□□□□ -2.24
SMCHD1-207ENST00000581711 OR1E2P47887 323 aa1.03□□□□□ -2.24
SMCHD1-207ENST00000581711 ZNF90Q03938 601 aa1.03□□□□□ -2.24
SMCHD1-207ENST00000581711 SLC38A11Q08AI6 406 aa1.03□□□□□ -2.24
SMCHD1-207ENST00000581711 PLCZ1Q86YW0 608 aa1.03□□□□□ -2.24
SMCHD1-207ENST00000581711 CCDC112Q8NEF3 446 aa1.03□□□□□ -2.24
SMCHD1-207ENST00000581711 NAA38Q9BRA0 125 aaKnown RBP1.03□□□□□ -2.24
SMCHD1-207ENST00000581711 SIKE1Q9BRV8 207 aa1.03□□□□□ -2.24
SMCHD1-207ENST00000581711 COMMD9Q9P000 198 aa1.03□□□□□ -2.24
SMCHD1-207ENST00000581711 DOK5Q9P104 306 aa1.03□□□□□ -2.24
SMCHD1-207ENST00000581711 CCDC88CQ9P219 2028 aa1.03□□□□□ -2.25
SMCHD1-207ENST00000581711 TMSB15BA0A087X1C1 80 aa1.02□□□□□ -2.25
SMCHD1-207ENST00000581711 TMEM235A6NFC5 223 aa1.02□□□□□ -2.25
SMCHD1-207ENST00000581711 OR11H12B2RN74 326 aa1.02□□□□□ -2.25
SMCHD1-207ENST00000581711 MPZL2O60487 215 aa1.02□□□□□ -2.25
SMCHD1-207ENST00000581711 CLUHO75153 1309 aa1.02□□□□□ -2.25
SMCHD1-207ENST00000581711 BRI3O95415 125 aa1.02□□□□□ -2.25
SMCHD1-207ENST00000581711 ZNF728P0DKX0 622 aa1.02□□□□□ -2.25
SMCHD1-207ENST00000581711 CDK9P50750 372 aaKnown RBP1.02□□□□□ -2.25
SMCHD1-207ENST00000581711 ERHP84090 104 aaKnown RBP1.02□□□□□ -2.25
SMCHD1-207ENST00000581711 FAM3AP98173 230 aa1.02□□□□□ -2.25
SMCHD1-207ENST00000581711 C1DQ13901 141 aaKnown RBP1.02□□□□□ -2.25
SMCHD1-207ENST00000581711 MESTQ5EB52 335 aa1.02□□□□□ -2.25
SMCHD1-207ENST00000581711 OR11H2Q8NH07 326 aa1.02□□□□□ -2.25
SMCHD1-207ENST00000581711 AGPAT3Q9NRZ7 376 aa1.02□□□□□ -2.25
SMCHD1-207ENST00000581711 HHLA2Q9UM44 414 aa1.02□□□□□ -2.25
SMCHD1-207ENST00000581711 PUS1Q9Y606 427 aaKnown RBP eCLIP1.02□□□□□ -2.25
SMCHD1-207ENST00000581711 SDK1Q7Z5N4 2213 aa1.01□□□□□ -2.25
SMCHD1-207ENST00000581711 WDR90Q96KV7 1748 aa1.01□□□□□ -2.25
SMCHD1-207ENST00000581711 ZNF705FA8MVS1 300 aaPredicted RBP1.01□□□□□ -2.25
SMCHD1-207ENST00000581711 OPRM1P35372 400 aa1.01□□□□□ -2.25
SMCHD1-207ENST00000581711 RNASEH2CQ8TDP1 164 aaKnown RBP1.01□□□□□ -2.25
SMCHD1-207ENST00000581711 TNFAIP8L1Q8WVP5 186 aa1.01□□□□□ -2.25
SMCHD1-207ENST00000581711 CCDC124Q96CT7 223 aaKnown RBP1.01□□□□□ -2.25
SMCHD1-207ENST00000581711 ACY3Q96HD9 319 aa1.01□□□□□ -2.25
SMCHD1-207ENST00000581711 MIEN1Q9BRT3 115 aa1.01□□□□□ -2.25
SMCHD1-207ENST00000581711 CACNA1AO00555 2505 aa1□□□□□ -2.25
SMCHD1-207ENST00000581711 KIAA0232Q92628 1395 aa1□□□□□ -2.25
SMCHD1-207ENST00000581711 ZNF532Q9HCE3 1301 aa1□□□□□ -2.25
SMCHD1-207ENST00000581711 GRIFINA4D1Z8 144 aa1□□□□□ -2.25
SMCHD1-207ENST00000581711 C2orf74A8MZ97 194 aa1□□□□□ -2.25
SMCHD1-207ENST00000581711 SLC17A3O00476 420 aa1□□□□□ -2.25
SMCHD1-207ENST00000581711 PHYHO14832 338 aa1□□□□□ -2.25
SMCHD1-207ENST00000581711 IGLV3-27P01718 113 aa1□□□□□ -2.25
SMCHD1-207ENST00000581711 ZNF705DP0CH99 300 aaPredicted RBP1□□□□□ -2.25
SMCHD1-207ENST00000581711 ZNF705BP0CI00 300 aaPredicted RBP1□□□□□ -2.25
SMCHD1-207ENST00000581711 ATP6V0CP27449 155 aa1□□□□□ -2.25
SMCHD1-207ENST00000581711 XCL1P47992 114 aa1□□□□□ -2.25
SMCHD1-207ENST00000581711 OR4D1Q15615 310 aa1□□□□□ -2.25
SMCHD1-207ENST00000581711 TMEM249Q2WGJ8 235 aa1□□□□□ -2.25
SMCHD1-207ENST00000581711 SPATA31B1PQ5VZV4 182 aa1□□□□□ -2.25
SMCHD1-207ENST00000581711 DRAM2Q6UX65 266 aa1□□□□□ -2.25
SMCHD1-207ENST00000581711 C10orf126Q8N4M7 172 aa1□□□□□ -2.25
SMCHD1-207ENST00000581711 CNEP1R1Q8N9A8 125 aa1□□□□□ -2.25
SMCHD1-207ENST00000581711 CYGBQ8WWM9 190 aa1□□□□□ -2.25
SMCHD1-207ENST00000581711 RORBQ92753 470 aa1□□□□□ -2.25
SMCHD1-207ENST00000581711 FAM215AQ9Y5M1 114 aa1□□□□□ -2.25
SMCHD1-207ENST00000581711 COL6A6A6NMZ7 2263 aa0.99□□□□□ -2.25
SMCHD1-207ENST00000581711 TRAV41A0A0B4J266 112 aa0.99□□□□□ -2.25
SMCHD1-207ENST00000581711 ARL6IP5O75915 188 aa0.99□□□□□ -2.25
SMCHD1-207ENST00000581711 FADS2O95864 444 aaKnown RBP0.99□□□□□ -2.25
SMCHD1-207ENST00000581711 IGHV1-69P01742 117 aa0.99□□□□□ -2.25
SMCHD1-207ENST00000581711 CRYBA1P05813 215 aa0.99□□□□□ -2.25
SMCHD1-207ENST00000581711 BPGMP07738 259 aa0.99□□□□□ -2.25
SMCHD1-207ENST00000581711 CD7P09564 240 aa0.99□□□□□ -2.25
SMCHD1-207ENST00000581711 SYT1P21579 422 aa0.99□□□□□ -2.25
SMCHD1-207ENST00000581711 HSPA9P38646 679 aaKnown RBP0.99□□□□□ -2.25
SMCHD1-207ENST00000581711 XRCC4Q13426 336 aa0.99□□□□□ -2.25
SMCHD1-207ENST00000581711 ZNF791Q3KP31 576 aaPredicted RBP0.99□□□□□ -2.25
SMCHD1-207ENST00000581711 FAM201AQ5SY85 155 aa0.99□□□□□ -2.25
SMCHD1-207ENST00000581711 LHFPL1Q86WI0 220 aa0.99□□□□□ -2.25
SMCHD1-207ENST00000581711 RPS4Y2Q8TD47 263 aa0.99□□□□□ -2.25
SMCHD1-207ENST00000581711 HBEGFQ99075 208 aa0.99□□□□□ -2.25
SMCHD1-207ENST00000581711 RETNLBQ9BQ08 111 aa0.99□□□□□ -2.25
SMCHD1-207ENST00000581711 SLC2A9Q9NRM0 540 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms