RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 CHST4Q8NCG5 386 aa3.12□□□□□ -1.91
DDX42-211ENST00000580108 ZNF439Q8NDP4 499 aa3.12□□□□□ -1.91
DDX42-211ENST00000580108 SETD9Q8NE22 299 aa3.12□□□□□ -1.91
DDX42-211ENST00000580108 Q8NFD4 153 aa3.12□□□□□ -1.91
DDX42-211ENST00000580108 OR10X1Q8NGY0 326 aa3.12□□□□□ -1.91
DDX42-211ENST00000580108 ZNF596Q8TC21 504 aa3.12□□□□□ -1.91
DDX42-211ENST00000580108 MRPL30Q8TCC3 161 aaKnown RBP3.12□□□□□ -1.91
DDX42-211ENST00000580108 TMEM203Q969S6 136 aa3.12□□□□□ -1.91
DDX42-211ENST00000580108 RPEQ96AT9 228 aa3.12□□□□□ -1.91
DDX42-211ENST00000580108 PHF21AQ96BD5 680 aa3.12□□□□□ -1.91
DDX42-211ENST00000580108 MRPL48Q96GC5 212 aaKnown RBP3.12□□□□□ -1.91
DDX42-211ENST00000580108 RBM14Q96PK6 669 aaKnown RBP3.12□□□□□ -1.91
DDX42-211ENST00000580108 HSPB9Q9BQS6 159 aa3.12□□□□□ -1.91
DDX42-211ENST00000580108 SULT4A1Q9BR01 284 aa3.12□□□□□ -1.91
DDX42-211ENST00000580108 HDHD3Q9BSH5 251 aaPredicted RBP3.12□□□□□ -1.91
DDX42-211ENST00000580108 SELENOIQ9C0D9 397 aa3.12□□□□□ -1.91
DDX42-211ENST00000580108 WDR12Q9GZL7 423 aaKnown RBP3.12□□□□□ -1.91
DDX42-211ENST00000580108 METTL9Q9H1A3 318 aa3.12□□□□□ -1.91
DDX42-211ENST00000580108 HIPK2Q9H2X6 1198 aa3.12□□□□□ -1.91
DDX42-211ENST00000580108 RAB18Q9NP72 206 aa3.12□□□□□ -1.91
DDX42-211ENST00000580108 TMEM138Q9NPI0 162 aa3.12□□□□□ -1.91
DDX42-211ENST00000580108 FKBP14Q9NWM8 211 aa3.12□□□□□ -1.91
DDX42-211ENST00000580108 IL36GQ9NZH8 169 aa3.12□□□□□ -1.91
DDX42-211ENST00000580108 OR6C3Q9NZP0 311 aa3.12□□□□□ -1.91
DDX42-211ENST00000580108 LSM2Q9Y333 95 aaKnown RBP3.12□□□□□ -1.91
DDX42-211ENST00000580108 MOB4Q9Y3A3 225 aa3.12□□□□□ -1.91
DDX42-211ENST00000580108 PEX16Q9Y5Y5 336 aa3.12□□□□□ -1.91
DDX42-211ENST00000580108 HSPE1-MOB4S4R3N1 261 aa3.12□□□□□ -1.91
DDX42-211ENST00000580108 IGHV1-3A0A0C4DH29 117 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 WI2-2373I1.2A0A1W2PRP0 233 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 FUOMA2VDF0 154 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 EFCAB10A6NFE3 127 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 AIPO00170 330 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 CCRL2O00421 344 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 MYL12BO14950 172 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 GPX5O75715 221 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 CSTBP04080 98 aaKnown RBP3.11□□□□□ -1.91
DDX42-211ENST00000580108 CDK1P06493 297 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 HSMCR30P0CW71 290 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 SLC2A2P11168 524 aaPredicted RBP3.11□□□□□ -1.91
DDX42-211ENST00000580108 TMEM11P17152 192 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 CHATP28329 748 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 PRRX1P54821 245 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 F2RL1P55085 397 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 WNT4P56705 351 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 SUMO2P61956 95 aaKnown RBP3.11□□□□□ -1.91
DDX42-211ENST00000580108 MRPL28Q13084 256 aaKnown RBP3.11□□□□□ -1.91
DDX42-211ENST00000580108 UNC119Q13432 240 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 MADCAM1Q13477 382 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 IRF3Q14653 427 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 ACSM3Q53FZ2 586 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 YIF1BQ5BJH7 314 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 CT45A1Q5HYN5 189 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 NHLRC3Q5JS37 347 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 RBM48Q5RL73 367 aaKnown RBP3.11□□□□□ -1.91
DDX42-211ENST00000580108 C6orf141Q5SZD1 244 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 SYT6Q5T7P8 510 aaPredicted RBP3.11□□□□□ -1.91
DDX42-211ENST00000580108 OR52W1Q6IF63 320 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 C11orf88Q6PI97 169 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 UNQ9370/PRO34162Q6UXP9 181 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 GLDNQ6ZMI3 551 aaPredicted RBP3.11□□□□□ -1.91
DDX42-211ENST00000580108 TMEM91Q6ZNR0 172 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 C6orf201Q7Z4U5 140 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 CEACAM19Q7Z692 300 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 CENPVQ7Z7K6 275 aaPredicted RBP3.11□□□□□ -1.91
DDX42-211ENST00000580108 NDUFA11Q86Y39 141 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 ANKRD13BQ86YJ7 626 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 Q8N6K4 173 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 PACRGLQ8N7B6 248 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 CT45A3Q8NHU0 189 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 SETD6Q8TBK2 473 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 CASTOR1Q8WTX7 329 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 MAFIPQ8WZ33 124 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 ST6GALNAC6Q969X2 333 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 CREB3L1Q96BA8 519 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 FAAP24Q9BTP7 215 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 MRPL20Q9BYC9 149 aaKnown RBP3.11□□□□□ -1.91
DDX42-211ENST00000580108 BARHL1Q9BZE3 327 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 LINC00574Q9H8X3 128 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 PLSCR3Q9NRY6 295 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 PLCXD1Q9NUJ7 323 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 CHCHD3Q9NX63 227 aaKnown RBP3.11□□□□□ -1.91
DDX42-211ENST00000580108 CNOT2Q9NZN8 540 aaKnown RBP3.11□□□□□ -1.91
DDX42-211ENST00000580108 RCC2Q9P258 522 aaKnown RBP3.11□□□□□ -1.91
DDX42-211ENST00000580108 GNG12Q9UBI6 72 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 PITPNC1Q9UKF7 332 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 TRAPPC2LQ9UL33 140 aa3.11□□□□□ -1.91
DDX42-211ENST00000580108 AK6Q9Y3D8 172 aaKnown RBP3.11□□□□□ -1.91
DDX42-211ENST00000580108 IRGMA1A4Y4 181 aa3.1□□□□□ -1.91
DDX42-211ENST00000580108 PSMB11A5LHX3 300 aa3.1□□□□□ -1.91
DDX42-211ENST00000580108 NCBP2LA6PVI3 153 aaKnown RBP3.1□□□□□ -1.91
DDX42-211ENST00000580108 SERPINE3A8MV23 424 aa3.1□□□□□ -1.91
DDX42-211ENST00000580108 MCRIP1C9JLW8 97 aa3.1□□□□□ -1.91
DDX42-211ENST00000580108 G3V318 75 aa3.1□□□□□ -1.91
DDX42-211ENST00000580108 H0YHG0 523 aa3.1□□□□□ -1.91
DDX42-211ENST00000580108 K7EIL1 84 aa3.1□□□□□ -1.91
DDX42-211ENST00000580108 SOCS1O15524 211 aa3.1□□□□□ -1.91
DDX42-211ENST00000580108 PDCD6O75340 191 aa3.1□□□□□ -1.91
DDX42-211ENST00000580108 GAPDHP04406 335 aaKnown RBP3.1□□□□□ -1.91
DDX42-211ENST00000580108 CD3GP09693 182 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms