RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 SSMEM1Q8WWF3 244 aa11.73□□□□□ -0.53
NPLOC4-209ENST00000572760 AJUBAQ96IF1 538 aa11.73□□□□□ -0.53
NPLOC4-209ENST00000572760 ABHD14BQ96IU4 210 aa11.73□□□□□ -0.53
NPLOC4-209ENST00000572760 DUX5Q96PT3 197 aa11.73□□□□□ -0.53
NPLOC4-209ENST00000572760 SOSTQ9BQB4 213 aa11.73□□□□□ -0.53
NPLOC4-209ENST00000572760 TOLLIPQ9H0E2 274 aa11.73□□□□□ -0.53
NPLOC4-209ENST00000572760 PRDM13Q9H4Q3 707 aa11.73□□□□□ -0.53
NPLOC4-209ENST00000572760 C2CD3Q4AC94 2353 aa11.72□□□□□ -0.53
NPLOC4-209ENST00000572760 SETD2Q9BYW2 2564 aaPredicted RBP11.72□□□□□ -0.53
NPLOC4-209ENST00000572760 ZNF736B4DX44 427 aaPredicted RBP11.72□□□□□ -0.53
NPLOC4-209ENST00000572760 H3BUX3 64 aa11.72□□□□□ -0.53
NPLOC4-209ENST00000572760 TXNL1O43396 289 aa11.72□□□□□ -0.53
NPLOC4-209ENST00000572760 IFNA6P05013 189 aa11.72□□□□□ -0.53
NPLOC4-209ENST00000572760 HRH1P35367 487 aa11.72□□□□□ -0.53
NPLOC4-209ENST00000572760 ETV6P41212 452 aa11.72□□□□□ -0.53
NPLOC4-209ENST00000572760 IER3P46695 156 aa11.72□□□□□ -0.53
NPLOC4-209ENST00000572760 LUMP51884 338 aaPredicted RBP11.72□□□□□ -0.53
NPLOC4-209ENST00000572760 TAS2R19P59542 299 aa11.72□□□□□ -0.53
NPLOC4-209ENST00000572760 HILS1P60008 231 aa11.72□□□□□ -0.53
NPLOC4-209ENST00000572760 DIAPH2-AS1Q14236 149 aa11.72□□□□□ -0.53
NPLOC4-209ENST00000572760 LYSMD2Q8IV50 215 aa11.72□□□□□ -0.53
NPLOC4-209ENST00000572760 OR8H3Q8N146 312 aa11.72□□□□□ -0.53
NPLOC4-209ENST00000572760 OR5R1Q8NH85 324 aa11.72□□□□□ -0.53
NPLOC4-209ENST00000572760 IFI27L2Q9H2X8 130 aa11.72□□□□□ -0.53
NPLOC4-209ENST00000572760 TAS2R8Q9NYW2 309 aa11.72□□□□□ -0.53
NPLOC4-209ENST00000572760 OR2W1Q9Y3N9 320 aa11.72□□□□□ -0.53
NPLOC4-209ENST00000572760 V9GYH0 126 aa11.72□□□□□ -0.53
NPLOC4-209ENST00000572760 SAA2-SAA4A0A096LPE2 208 aa11.71□□□□□ -0.53
NPLOC4-209ENST00000572760 DNAJC9-AS1A6NH13 148 aa11.71□□□□□ -0.53
NPLOC4-209ENST00000572760 TRIM77I1YAP6 450 aa11.71□□□□□ -0.53
NPLOC4-209ENST00000572760 GSTZ1O43708 216 aaPredicted RBP11.71□□□□□ -0.53
NPLOC4-209ENST00000572760 LANCL1O43813 399 aa11.71□□□□□ -0.53
NPLOC4-209ENST00000572760 IGHV4-59P01825 116 aa11.71□□□□□ -0.53
NPLOC4-209ENST00000572760 CSF1P09603 554 aa11.71□□□□□ -0.53
NPLOC4-209ENST00000572760 SAA2P0DJI9 122 aaPredicted RBP11.71□□□□□ -0.53
NPLOC4-209ENST00000572760 RFX2P48378 723 aa11.71□□□□□ -0.53
NPLOC4-209ENST00000572760 RAB13P51153 203 aa11.71□□□□□ -0.53
NPLOC4-209ENST00000572760 HERV-K104P61576 105 aa11.71□□□□□ -0.53
NPLOC4-209ENST00000572760 ZNF816Q0VGE8 651 aaPredicted RBP11.71□□□□□ -0.53
NPLOC4-209ENST00000572760 DYRK1AQ13627 763 aa11.71□□□□□ -0.53
NPLOC4-209ENST00000572760 LY6EQ16553 131 aa11.71□□□□□ -0.53
NPLOC4-209ENST00000572760 AANATQ16613 207 aa11.71□□□□□ -0.53
NPLOC4-209ENST00000572760 TUSC1Q2TAM9 212 aa11.71□□□□□ -0.53
NPLOC4-209ENST00000572760 RNASE10Q5GAN6 216 aaKnown RBP11.71□□□□□ -0.53
NPLOC4-209ENST00000572760 OVCH2Q7RTZ1 564 aa11.71□□□□□ -0.53
NPLOC4-209ENST00000572760 Q8N402 240 aa11.71□□□□□ -0.53
NPLOC4-209ENST00000572760 TMEM86BQ8N661 226 aa11.71□□□□□ -0.53
NPLOC4-209ENST00000572760 TMEM229BQ8NBD8 167 aa11.71□□□□□ -0.53
NPLOC4-209ENST00000572760 OR6F1Q8NGZ6 308 aa11.71□□□□□ -0.53
NPLOC4-209ENST00000572760 RTN4IP1Q8WWV3 396 aaPredicted RBP11.71□□□□□ -0.53
NPLOC4-209ENST00000572760 THAP7Q9BT49 309 aaPredicted RBP11.71□□□□□ -0.53
NPLOC4-209ENST00000572760 OR2D2Q9H210 308 aa11.71□□□□□ -0.53
NPLOC4-209ENST00000572760 POMT1Q9Y6A1 747 aa11.71□□□□□ -0.53
NPLOC4-209ENST00000572760 MXRA5Q9NR99 2828 aa11.71□□□□□ -0.54
NPLOC4-209ENST00000572760 IGHV1-3A0A0C4DH29 117 aa11.7□□□□□ -0.54
NPLOC4-209ENST00000572760 M0QYG6 137 aa11.7□□□□□ -0.54
NPLOC4-209ENST00000572760 VENTXO95231 258 aa11.7□□□□□ -0.54
NPLOC4-209ENST00000572760 PPYP01298 95 aa11.7□□□□□ -0.54
NPLOC4-209ENST00000572760 AADACP22760 399 aa11.7□□□□□ -0.54
NPLOC4-209ENST00000572760 INPP1P49441 399 aa11.7□□□□□ -0.54
NPLOC4-209ENST00000572760 ZNF137PP52743 207 aa11.7□□□□□ -0.54
NPLOC4-209ENST00000572760 FXYD4P59646 89 aa11.7□□□□□ -0.54
NPLOC4-209ENST00000572760 ZNF45Q02386 682 aa11.7□□□□□ -0.54
NPLOC4-209ENST00000572760 SLC9A3R2Q15599 337 aa11.7□□□□□ -0.54
NPLOC4-209ENST00000572760 RPL39P5Q59GN2 51 aa11.7□□□□□ -0.54
NPLOC4-209ENST00000572760 TMEM17Q86X19 198 aa11.7□□□□□ -0.54
NPLOC4-209ENST00000572760 ODF3L1Q8IXM7 274 aa11.7□□□□□ -0.54
NPLOC4-209ENST00000572760 DRAM1Q8N682 238 aa11.7□□□□□ -0.54
NPLOC4-209ENST00000572760 ZDHHC22Q8N966 263 aa11.7□□□□□ -0.54
NPLOC4-209ENST00000572760 FAM216AQ8WUB2 273 aa11.7□□□□□ -0.54
NPLOC4-209ENST00000572760 CAPSLQ8WWF8 208 aa11.7□□□□□ -0.54
NPLOC4-209ENST00000572760 GIMAP1Q8WWP7 306 aa11.7□□□□□ -0.54
NPLOC4-209ENST00000572760 ST6GALNAC6Q969X2 333 aa11.7□□□□□ -0.54
NPLOC4-209ENST00000572760 AGMATQ9BSE5 352 aa11.7□□□□□ -0.54
NPLOC4-209ENST00000572760 ZNF2Q9BSG1 426 aaPredicted RBP11.7□□□□□ -0.54
NPLOC4-209ENST00000572760 PITPNC1Q9UKF7 332 aa11.7□□□□□ -0.54
NPLOC4-209ENST00000572760 SVEP1Q4LDE5 3571 aa11.7□□□□□ -0.54
NPLOC4-209ENST00000572760 A0A1W2PPI3 338 aa11.69□□□□□ -0.54
NPLOC4-209ENST00000572760 VGLL3A8MV65 326 aa11.69□□□□□ -0.54
NPLOC4-209ENST00000572760 M0R1X1 148 aa11.69□□□□□ -0.54
NPLOC4-209ENST00000572760 TIMM23O14925 209 aa11.69□□□□□ -0.54
NPLOC4-209ENST00000572760 TUSC2O75896 110 aa11.69□□□□□ -0.54
NPLOC4-209ENST00000572760 SLC22A5O76082 557 aa11.69□□□□□ -0.54
NPLOC4-209ENST00000572760 RAB3DO95716 219 aa11.69□□□□□ -0.54
NPLOC4-209ENST00000572760 CD3DP04234 171 aa11.69□□□□□ -0.54
NPLOC4-209ENST00000572760 TBPP20226 339 aa11.69□□□□□ -0.54
NPLOC4-209ENST00000572760 DYNLT3P51808 116 aa11.69□□□□□ -0.54
NPLOC4-209ENST00000572760 HES1Q14469 280 aa11.69□□□□□ -0.54
NPLOC4-209ENST00000572760 ZNF79Q15937 498 aa11.69□□□□□ -0.54
NPLOC4-209ENST00000572760 FAM71F2Q6NXP2 309 aa11.69□□□□□ -0.54
NPLOC4-209ENST00000572760 STEAP1BQ6NZ63 245 aa11.69□□□□□ -0.54
NPLOC4-209ENST00000572760 LINC00299Q6ZSB3 139 aa11.69□□□□□ -0.54
NPLOC4-209ENST00000572760 ZNF833PQ6ZTB9 187 aa11.69□□□□□ -0.54
NPLOC4-209ENST00000572760 GDPD1Q8N9F7 314 aa11.69□□□□□ -0.54
NPLOC4-209ENST00000572760 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.69□□□□□ -0.54
NPLOC4-209ENST00000572760 OR56B4Q8NH76 319 aa11.69□□□□□ -0.54
NPLOC4-209ENST00000572760 SECTM1Q8WVN6 248 aa11.69□□□□□ -0.54
NPLOC4-209ENST00000572760 S100ZQ8WXG8 99 aa11.69□□□□□ -0.54
NPLOC4-209ENST00000572760 TINAGL1Q9GZM7 467 aaPredicted RBP11.69□□□□□ -0.54
NPLOC4-209ENST00000572760 ESM1Q9NQ30 184 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms