RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 VENTXO95231 258 aa11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 KLF3P57682 345 aaPredicted RBP11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 BPIFB3P59826 476 aa11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 C11orf42Q8N5U0 333 aa11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 FGFBP3Q8TAT2 258 aa11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 SCGB1C1Q8TD33 95 aa11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 HES7Q9BYE0 225 aa11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 RPRMQ9NS64 109 aa11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 HLA-HP01893 362 aa11.89□□□□□ -0.51
RABGGTA-220ENST00000560998 CELA3AP09093 270 aa11.89□□□□□ -0.51
RABGGTA-220ENST00000560998 CHRNB4P30926 498 aa11.89□□□□□ -0.51
RABGGTA-220ENST00000560998 LHX2P50458 406 aa11.89□□□□□ -0.51
RABGGTA-220ENST00000560998 TPPP2P59282 170 aa11.89□□□□□ -0.51
RABGGTA-220ENST00000560998 PCBD1P61457 104 aa11.89□□□□□ -0.51
RABGGTA-220ENST00000560998 MEF2BQ02080 365 aaPredicted RBP11.89□□□□□ -0.51
RABGGTA-220ENST00000560998 ZNF154Q13106 437 aa11.89□□□□□ -0.51
RABGGTA-220ENST00000560998 TOMM20LQ6UXN7 152 aa11.89□□□□□ -0.51
RABGGTA-220ENST00000560998 C17orf78Q8N4C9 275 aa11.89□□□□□ -0.51
RABGGTA-220ENST00000560998 TMEM217Q8N7C4 229 aa11.89□□□□□ -0.51
RABGGTA-220ENST00000560998 IL22RA2Q969J5 263 aa11.89□□□□□ -0.51
RABGGTA-220ENST00000560998 SLC35E1Q96K37 410 aa11.89□□□□□ -0.51
RABGGTA-220ENST00000560998 PARD6GQ9BYG4 376 aaPredicted RBP11.89□□□□□ -0.51
RABGGTA-220ENST00000560998 ABI3Q9P2A4 366 aa11.89□□□□□ -0.51
RABGGTA-220ENST00000560998 B4GALT7Q9UBV7 327 aa11.89□□□□□ -0.51
RABGGTA-220ENST00000560998 IGKV3D-15A0A087WSY6 115 aa11.88□□□□□ -0.51
RABGGTA-220ENST00000560998 A0A1W2PN81 502 aa11.88□□□□□ -0.51
RABGGTA-220ENST00000560998 SYNGR4O95473 234 aa11.88□□□□□ -0.51
RABGGTA-220ENST00000560998 CD99P14209 185 aa11.88□□□□□ -0.51
RABGGTA-220ENST00000560998 CHRNA7P36544 502 aa11.88□□□□□ -0.51
RABGGTA-220ENST00000560998 OR1C1Q15619 314 aa11.88□□□□□ -0.51
RABGGTA-220ENST00000560998 TMEM41BQ5BJD5 291 aa11.88□□□□□ -0.51
RABGGTA-220ENST00000560998 LCN15Q6UWW0 184 aa11.88□□□□□ -0.51
RABGGTA-220ENST00000560998 SELENOHQ8IZQ5 122 aaKnown RBP11.88□□□□□ -0.51
RABGGTA-220ENST00000560998 SUMF1Q8NBK3 374 aa11.88□□□□□ -0.51
RABGGTA-220ENST00000560998 OR11L1Q8NGX0 322 aa11.88□□□□□ -0.51
RABGGTA-220ENST00000560998 SPSB1Q96BD6 273 aa11.88□□□□□ -0.51
RABGGTA-220ENST00000560998 TECTBQ96PL2 329 aa11.88□□□□□ -0.51
RABGGTA-220ENST00000560998 VAMP8Q9BV40 100 aa11.88□□□□□ -0.51
RABGGTA-220ENST00000560998 OR51B6Q9H340 312 aa11.88□□□□□ -0.51
RABGGTA-220ENST00000560998 UBE2J1Q9Y385 318 aaPredicted RBP11.88□□□□□ -0.51
RABGGTA-220ENST00000560998 R4GN57 208 aa11.88□□□□□ -0.51
RABGGTA-220ENST00000560998 KMT2EQ8IZD2 1858 aa11.88□□□□□ -0.51
RABGGTA-220ENST00000560998 TRAV39A0A0B4J263 110 aa11.88□□□□□ -0.51
RABGGTA-220ENST00000560998 ADAM20O43506 726 aa11.88□□□□□ -0.51
RABGGTA-220ENST00000560998 ESDP10768 282 aa11.88□□□□□ -0.51
RABGGTA-220ENST00000560998 VDAC1P21796 283 aa11.88□□□□□ -0.51
RABGGTA-220ENST00000560998 MDH2P40926 338 aaKnown RBP11.88□□□□□ -0.51
RABGGTA-220ENST00000560998 CLDN18P56856 261 aa11.88□□□□□ -0.51
RABGGTA-220ENST00000560998 RPL15P61313 204 aaKnown RBP11.88□□□□□ -0.51
RABGGTA-220ENST00000560998 ZNF726P1Q15940 193 aa11.88□□□□□ -0.51
RABGGTA-220ENST00000560998 NMSQ5H8A3 153 aa11.88□□□□□ -0.51
RABGGTA-220ENST00000560998 TPTE2P1Q5T6R2 138 aa11.88□□□□□ -0.51
RABGGTA-220ENST00000560998 DHRS13Q6UX07 377 aa11.88□□□□□ -0.51
RABGGTA-220ENST00000560998 CMTM2Q8TAZ6 248 aa11.88□□□□□ -0.51
RABGGTA-220ENST00000560998 SDSLQ96GA7 329 aa11.88□□□□□ -0.51
RABGGTA-220ENST00000560998 MAGT1Q9H0U3 335 aa11.88□□□□□ -0.51
RABGGTA-220ENST00000560998 PLSCR2Q9NRY7 297 aa11.88□□□□□ -0.51
RABGGTA-220ENST00000560998 PLA2G3Q9NZ20 509 aa11.88□□□□□ -0.51
RABGGTA-220ENST00000560998 NKX6-3A6NJ46 265 aa11.87□□□□□ -0.51
RABGGTA-220ENST00000560998 FAM166BA8MTA8 275 aa11.87□□□□□ -0.51
RABGGTA-220ENST00000560998 ZNF737O75373 536 aa11.87□□□□□ -0.51
RABGGTA-220ENST00000560998 SRYQ05066 204 aa11.87□□□□□ -0.51
RABGGTA-220ENST00000560998 CXorf66Q5JRM2 361 aaPredicted RBP11.87□□□□□ -0.51
RABGGTA-220ENST00000560998 EXTL1Q92935 676 aa11.87□□□□□ -0.51
RABGGTA-220ENST00000560998 WDYHV1Q96HA8 205 aa11.87□□□□□ -0.51
RABGGTA-220ENST00000560998 TTTY12Q9BZ98 90 aa11.87□□□□□ -0.51
RABGGTA-220ENST00000560998 ZNF391Q9UJN7 358 aa11.87□□□□□ -0.51
RABGGTA-220ENST00000560998 PXMP4Q9Y6I8 212 aa11.87□□□□□ -0.51
RABGGTA-220ENST00000560998 MMP23AO75900 390 aa11.87□□□□□ -0.51
RABGGTA-220ENST00000560998 TMEM50AO95807 157 aa11.87□□□□□ -0.51
RABGGTA-220ENST00000560998 CNN3Q15417 329 aaKnown RBP11.87□□□□□ -0.51
RABGGTA-220ENST00000560998 NRN1LQ496H8 165 aa11.87□□□□□ -0.51
RABGGTA-220ENST00000560998 HES3Q5TGS1 186 aa11.87□□□□□ -0.51
RABGGTA-220ENST00000560998 TMEM42Q69YG0 159 aa11.87□□□□□ -0.51
RABGGTA-220ENST00000560998 LINC00696Q6ZRV3 163 aa11.87□□□□□ -0.51
RABGGTA-220ENST00000560998 OR4B1Q8NGF8 309 aa11.87□□□□□ -0.51
RABGGTA-220ENST00000560998 OR2D3Q8NGH3 330 aa11.87□□□□□ -0.51
RABGGTA-220ENST00000560998 RAB40CQ96S21 281 aa11.87□□□□□ -0.51
RABGGTA-220ENST00000560998 ELOVL1Q9BW60 279 aa11.87□□□□□ -0.51
RABGGTA-220ENST00000560998 LINC00470Q9BZP3 86 aa11.87□□□□□ -0.51
RABGGTA-220ENST00000560998 TMEM9BQ9NQ34 198 aa11.87□□□□□ -0.51
RABGGTA-220ENST00000560998 MANBALQ9NQG1 85 aa11.87□□□□□ -0.51
RABGGTA-220ENST00000560998 RNF115Q9Y4L5 304 aa11.87□□□□□ -0.51
RABGGTA-220ENST00000560998 TRAPPC1Q9Y5R8 145 aa11.87□□□□□ -0.51
RABGGTA-220ENST00000560998 IGKV1-27A0A075B6S5 117 aa11.86□□□□□ -0.51
RABGGTA-220ENST00000560998 hCG_38984A0A1B0GV85 526 aa11.86□□□□□ -0.51
RABGGTA-220ENST00000560998 CHST1O43916 411 aa11.86□□□□□ -0.51
RABGGTA-220ENST00000560998 MRPL33O75394 65 aaKnown RBP11.86□□□□□ -0.51
RABGGTA-220ENST00000560998 TNFSF15O95150 251 aa11.86□□□□□ -0.51
RABGGTA-220ENST00000560998 PPYP01298 95 aa11.86□□□□□ -0.51
RABGGTA-220ENST00000560998 IGHV3-9P01782 118 aa11.86□□□□□ -0.51
RABGGTA-220ENST00000560998 GLI4P10075 376 aa11.86□□□□□ -0.51
RABGGTA-220ENST00000560998 SLC25A6P12236 298 aa11.86□□□□□ -0.51
RABGGTA-220ENST00000560998 AADACP22760 399 aa11.86□□□□□ -0.51
RABGGTA-220ENST00000560998 OPRM1P35372 400 aa11.86□□□□□ -0.51
RABGGTA-220ENST00000560998 MAGEA5P43359 124 aa11.86□□□□□ -0.51
RABGGTA-220ENST00000560998 PSMB3P49720 205 aa11.86□□□□□ -0.51
RABGGTA-220ENST00000560998 RRADP55042 308 aa11.86□□□□□ -0.51
RABGGTA-220ENST00000560998 PRSS12P56730 875 aa11.86□□□□□ -0.51
RABGGTA-220ENST00000560998 RNPS1Q15287 305 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms