RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 AGPAT2O15120 278 aa6.78□□□□□ -1.32
SMAD3-212ENST00000559937 SPINT2O43291 252 aa6.78□□□□□ -1.32
SMAD3-212ENST00000559937 PPIHO43447 177 aaKnown RBP6.78□□□□□ -1.32
SMAD3-212ENST00000559937 WISP2O76076 250 aa6.78□□□□□ -1.32
SMAD3-212ENST00000559937 SPINK2P20155 84 aa6.78□□□□□ -1.32
SMAD3-212ENST00000559937 CEACAM8P31997 349 aaPredicted RBP6.78□□□□□ -1.32
SMAD3-212ENST00000559937 PPP1CCP36873 323 aaKnown RBP6.78□□□□□ -1.32
SMAD3-212ENST00000559937 FABP6P51161 128 aa6.78□□□□□ -1.32
SMAD3-212ENST00000559937 ARHGDIBP52566 201 aa6.78□□□□□ -1.32
SMAD3-212ENST00000559937 COL10A1Q03692 680 aa6.78□□□□□ -1.32
SMAD3-212ENST00000559937 TLE4Q04727 773 aa6.78□□□□□ -1.32
SMAD3-212ENST00000559937 FOXC1Q12948 553 aa6.78□□□□□ -1.32
SMAD3-212ENST00000559937 CR1LQ2VPA4 569 aa6.78□□□□□ -1.32
SMAD3-212ENST00000559937 AKR1C8PQ5T2L2 129 aa6.78□□□□□ -1.32
SMAD3-212ENST00000559937 PRAMEF6Q5VXH4 476 aa6.78□□□□□ -1.32
SMAD3-212ENST00000559937 ZNF826PQ6ZT77 177 aa6.78□□□□□ -1.32
SMAD3-212ENST00000559937 ZNF525Q8N782 197 aa6.78□□□□□ -1.32
SMAD3-212ENST00000559937 C15orf54Q8N8G6 183 aa6.78□□□□□ -1.32
SMAD3-212ENST00000559937 CD300LFQ8TDQ1 290 aa6.78□□□□□ -1.32
SMAD3-212ENST00000559937 RBMXL1Q96E39 390 aaKnown RBP6.78□□□□□ -1.32
SMAD3-212ENST00000559937 SNX22Q96L94 193 aa6.78□□□□□ -1.32
SMAD3-212ENST00000559937 HSD17B10Q99714 261 aaKnown RBP6.78□□□□□ -1.32
SMAD3-212ENST00000559937 AIFM2Q9BRQ8 373 aa6.78□□□□□ -1.32
SMAD3-212ENST00000559937 OR2D2Q9H210 308 aa6.78□□□□□ -1.32
SMAD3-212ENST00000559937 TUBA4BQ9H853 241 aa6.78□□□□□ -1.32
SMAD3-212ENST00000559937 SMCO4Q9NRQ5 59 aa6.78□□□□□ -1.32
SMAD3-212ENST00000559937 PSENENQ9NZ42 101 aa6.78□□□□□ -1.32
SMAD3-212ENST00000559937 HSPB7Q9UBY9 170 aa6.78□□□□□ -1.32
SMAD3-212ENST00000559937 FAM215AQ9Y5M1 114 aa6.78□□□□□ -1.32
SMAD3-212ENST00000559937 IGLV3-9A0A075B6K5 115 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 FAM90A9PA6NNJ1 464 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 C9JQL5 133 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 ITGB1BP1O14713 200 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 MGST3O14880 152 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 ZNF737O75373 536 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 CST7O76096 145 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 CLDN14O95500 239 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 CRYAAP02489 173 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 FOLR2P14207 255 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 GZMHP20718 246 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 OMGP23515 440 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 PRDX2P32119 198 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 GATA4P43694 442 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 GABRA2P47869 451 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 CEBPDP49716 269 aaPredicted RBP6.77□□□□□ -1.33
SMAD3-212ENST00000559937 PPT1P50897 306 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 KLF3P57682 345 aaPredicted RBP6.77□□□□□ -1.33
SMAD3-212ENST00000559937 NKX6-1P78426 367 aaPredicted RBP6.77□□□□□ -1.33
SMAD3-212ENST00000559937 SERF2P84101 59 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 AESQ08117 197 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 ATP6V1FQ16864 119 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 SMUG1Q53HV7 270 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 KRBOX4Q5JUW0 171 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 SPSB3Q6PJ21 355 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 ZNF474Q6S9Z5 364 aaPredicted RBP6.77□□□□□ -1.33
SMAD3-212ENST00000559937 Q6ZRM9 215 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 SSX8Q7RTT4 187 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 CBLN2Q8IUK8 224 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 PRR18Q8N4B5 295 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 OR52L2PQ8NGH6 319 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 FAM57AQ8TBR7 257 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 SCGB1C1Q8TD33 95 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 LRRC29Q8WV35 223 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 MUCL1Q96DR8 90 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 SCNM1Q9BWG6 230 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 EGLN1Q9GZT9 426 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 EIF5A2Q9GZV4 153 aaKnown RBP6.77□□□□□ -1.33
SMAD3-212ENST00000559937 PARP12Q9H0J9 701 aaKnown RBP6.77□□□□□ -1.33
SMAD3-212ENST00000559937 MSL2Q9HCI7 577 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.77□□□□□ -1.33
SMAD3-212ENST00000559937 UFSP2Q9NUQ7 469 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 JPT1Q9UK76 154 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 PRELID3BQ9Y3B1 194 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 TIMM9Q9Y5J7 89 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 HCFC1P51610 2035 aa6.77□□□□□ -1.33
SMAD3-212ENST00000559937 USF3Q68DE3 2245 aa6.76□□□□□ -1.33
SMAD3-212ENST00000559937 RBFOX3A6NFN3 312 aa6.76□□□□□ -1.33
SMAD3-212ENST00000559937 ATP6V1G2-DDX39BF2Z307 99 aa6.76□□□□□ -1.33
SMAD3-212ENST00000559937 C15orf65H3BRN8 121 aa6.76□□□□□ -1.33
SMAD3-212ENST00000559937 F2RL2O00254 374 aa6.76□□□□□ -1.33
SMAD3-212ENST00000559937 YPEL1O60688 119 aa6.76□□□□□ -1.33
SMAD3-212ENST00000559937 NDUFS6O75380 124 aaKnown RBP6.76□□□□□ -1.33
SMAD3-212ENST00000559937 C1QL1O75973 258 aa6.76□□□□□ -1.33
SMAD3-212ENST00000559937 CLDN1O95832 211 aa6.76□□□□□ -1.33
SMAD3-212ENST00000559937 HSPB1P04792 205 aaKnown RBP6.76□□□□□ -1.33
SMAD3-212ENST00000559937 C1QTNF9P0C862 333 aa6.76□□□□□ -1.33
SMAD3-212ENST00000559937 ZNF16P17020 682 aaPredicted RBP6.76□□□□□ -1.33
SMAD3-212ENST00000559937 GLIPR1P48060 266 aa6.76□□□□□ -1.33
SMAD3-212ENST00000559937 FHITP49789 147 aa6.76□□□□□ -1.33
SMAD3-212ENST00000559937 ASCL1P50553 236 aa6.76□□□□□ -1.33
SMAD3-212ENST00000559937 ZNF83P51522 516 aa6.76□□□□□ -1.33
SMAD3-212ENST00000559937 SELENOVP59797 346 aa6.76□□□□□ -1.33
SMAD3-212ENST00000559937 TNFRSF9Q07011 255 aa6.76□□□□□ -1.33
SMAD3-212ENST00000559937 TMEM267Q0VDI3 215 aaPredicted RBP6.76□□□□□ -1.33
SMAD3-212ENST00000559937 PMS2P11Q13670 270 aa6.76□□□□□ -1.33
SMAD3-212ENST00000559937 RHEBQ15382 184 aa6.76□□□□□ -1.33
SMAD3-212ENST00000559937 LRRC75BQ2VPJ9 315 aa6.76□□□□□ -1.33
SMAD3-212ENST00000559937 TMEM30BQ3MIR4 351 aa6.76□□□□□ -1.33
SMAD3-212ENST00000559937 RNF212Q495C1 297 aa6.76□□□□□ -1.33
SMAD3-212ENST00000559937 ZNF506Q5JVG8 444 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms