RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 PITPNAQ00169 270 aa12.52□□□□□ -0.41
CHMP1A-206ENST00000549139 KIR2DS1Q14954 304 aa12.52□□□□□ -0.41
CHMP1A-206ENST00000549139 PNLIPRP3Q17RR3 467 aa12.52□□□□□ -0.41
CHMP1A-206ENST00000549139 HACD4Q5VWC8 232 aa12.52□□□□□ -0.41
CHMP1A-206ENST00000549139 Q6ZS49 121 aa12.52□□□□□ -0.41
CHMP1A-206ENST00000549139 MOB3BQ86TA1 216 aa12.52□□□□□ -0.41
CHMP1A-206ENST00000549139 TGIF2LXQ8IUE1 241 aa12.52□□□□□ -0.41
CHMP1A-206ENST00000549139 ODF3L1Q8IXM7 274 aa12.52□□□□□ -0.41
CHMP1A-206ENST00000549139 KLHDC1Q8N7A1 406 aa12.52□□□□□ -0.41
CHMP1A-206ENST00000549139 OR2AK2Q8NG84 335 aa12.52□□□□□ -0.41
CHMP1A-206ENST00000549139 OR4A4PQ8NGN8 299 aa12.52□□□□□ -0.41
CHMP1A-206ENST00000549139 OR2T6Q8NHC8 308 aa12.52□□□□□ -0.41
CHMP1A-206ENST00000549139 SLC25A33Q9BSK2 321 aa12.52□□□□□ -0.41
CHMP1A-206ENST00000549139 PRSS22Q9GZN4 317 aa12.52□□□□□ -0.41
CHMP1A-206ENST00000549139 TOLLIPQ9H0E2 274 aa12.52□□□□□ -0.41
CHMP1A-206ENST00000549139 ABCG5Q9H222 651 aa12.52□□□□□ -0.41
CHMP1A-206ENST00000549139 GHITMQ9H3K2 345 aa12.52□□□□□ -0.41
CHMP1A-206ENST00000549139 DIABLOQ9NR28 239 aa12.52□□□□□ -0.41
CHMP1A-206ENST00000549139 SLC23A1Q9UHI7 598 aa12.52□□□□□ -0.41
CHMP1A-206ENST00000549139 ELF5Q9UKW6 265 aaPredicted RBP12.52□□□□□ -0.41
CHMP1A-206ENST00000549139 STAB2Q8WWQ8 2551 aa12.52□□□□□ -0.41
CHMP1A-206ENST00000549139 FABP7O15540 132 aa12.51□□□□□ -0.41
CHMP1A-206ENST00000549139 HSPA12AO43301 675 aa12.51□□□□□ -0.41
CHMP1A-206ENST00000549139 DIRAS3O95661 229 aa12.51□□□□□ -0.41
CHMP1A-206ENST00000549139 DTYMKP23919 212 aa12.51□□□□□ -0.41
CHMP1A-206ENST00000549139 CD1BP29016 333 aa12.51□□□□□ -0.41
CHMP1A-206ENST00000549139 REG1BP48304 166 aa12.51□□□□□ -0.41
CHMP1A-206ENST00000549139 BLCAPP62952 87 aa12.51□□□□□ -0.41
CHMP1A-206ENST00000549139 CTF1Q16619 201 aa12.51□□□□□ -0.41
CHMP1A-206ENST00000549139 FOXB2Q5VYV0 432 aa12.51□□□□□ -0.41
CHMP1A-206ENST00000549139 GPR141Q7Z602 305 aa12.51□□□□□ -0.41
CHMP1A-206ENST00000549139 EDARADDQ8WWZ3 215 aa12.51□□□□□ -0.41
CHMP1A-206ENST00000549139 KCTD12Q96CX2 325 aaKnown RBP12.51□□□□□ -0.41
CHMP1A-206ENST00000549139 NAA50Q9GZZ1 169 aaKnown RBP12.51□□□□□ -0.41
CHMP1A-206ENST00000549139 DCSTAMPQ9H295 470 aa12.51□□□□□ -0.41
CHMP1A-206ENST00000549139 ZNF702PQ9H963 129 aa12.51□□□□□ -0.41
CHMP1A-206ENST00000549139 PIPOXQ9P0Z9 390 aa12.51□□□□□ -0.41
CHMP1A-206ENST00000549139 ZNF230Q9UIE0 474 aaPredicted RBP12.51□□□□□ -0.41
CHMP1A-206ENST00000549139 IGKV1-6A0A0C4DH72 117 aa12.5□□□□□ -0.41
CHMP1A-206ENST00000549139 M0QZK8 103 aa12.5□□□□□ -0.41
CHMP1A-206ENST00000549139 IGKV1D-33P01593 117 aa12.5□□□□□ -0.41
CHMP1A-206ENST00000549139 IGKV1-33P01594 117 aa12.5□□□□□ -0.41
CHMP1A-206ENST00000549139 GSTT2P0CG29 244 aa12.5□□□□□ -0.41
CHMP1A-206ENST00000549139 GSTT2BP0CG30 244 aa12.5□□□□□ -0.41
CHMP1A-206ENST00000549139 TMEM11P17152 192 aa12.5□□□□□ -0.41
CHMP1A-206ENST00000549139 GPR107Q5VW38 600 aa12.5□□□□□ -0.41
CHMP1A-206ENST00000549139 FAM71F2Q6NXP2 309 aa12.5□□□□□ -0.41
CHMP1A-206ENST00000549139 IZUMO1Q8IYV9 350 aa12.5□□□□□ -0.41
CHMP1A-206ENST00000549139 S100A16Q96FQ6 103 aaKnown RBP12.5□□□□□ -0.41
CHMP1A-206ENST00000549139 AGMATQ9BSE5 352 aa12.5□□□□□ -0.41
CHMP1A-206ENST00000549139 CABLES2Q9BTV7 478 aa12.5□□□□□ -0.41
CHMP1A-206ENST00000549139 IFI27L2Q9H2X8 130 aa12.5□□□□□ -0.41
CHMP1A-206ENST00000549139 OR1A1Q9P1Q5 309 aa12.5□□□□□ -0.41
CHMP1A-206ENST00000549139 TRAV18A0A075B6X5 111 aa12.49□□□□□ -0.41
CHMP1A-206ENST00000549139 TMEM235A6NFC5 223 aa12.49□□□□□ -0.41
CHMP1A-206ENST00000549139 K7EIL1 84 aa12.49□□□□□ -0.41
CHMP1A-206ENST00000549139 RAB29O14966 203 aa12.49□□□□□ -0.41
CHMP1A-206ENST00000549139 ST8SIA5O15466 376 aa12.49□□□□□ -0.41
CHMP1A-206ENST00000549139 RORCP51449 518 aa12.49□□□□□ -0.41
CHMP1A-206ENST00000549139 GNG2P59768 71 aa12.49□□□□□ -0.41
CHMP1A-206ENST00000549139 HES1Q14469 280 aa12.49□□□□□ -0.41
CHMP1A-206ENST00000549139 ZNF833PQ6ZTB9 187 aa12.49□□□□□ -0.41
CHMP1A-206ENST00000549139 OR2T10Q8NGZ9 312 aa12.49□□□□□ -0.41
CHMP1A-206ENST00000549139 MAFIPQ8WZ33 124 aa12.49□□□□□ -0.41
CHMP1A-206ENST00000549139 EAF1Q96JC9 268 aaPredicted RBP12.49□□□□□ -0.41
CHMP1A-206ENST00000549139 CMTM3Q96MX0 182 aa12.49□□□□□ -0.41
CHMP1A-206ENST00000549139 C11orf54Q9H0W9 315 aaPredicted RBP12.49□□□□□ -0.41
CHMP1A-206ENST00000549139 SAA2-SAA4A0A096LPE2 208 aa12.48□□□□□ -0.41
CHMP1A-206ENST00000549139 TRBV6-7A0A0A0MS04 114 aa12.48□□□□□ -0.41
CHMP1A-206ENST00000549139 IGHV3-72A0A0B4J1Y9 119 aa12.48□□□□□ -0.41
CHMP1A-206ENST00000549139 ADARB2-AS1A8MUL3 147 aa12.48□□□□□ -0.41
CHMP1A-206ENST00000549139 XRCC3O43542 346 aa12.48□□□□□ -0.41
CHMP1A-206ENST00000549139 AMY1AP04745 511 aa12.48□□□□□ -0.41
CHMP1A-206ENST00000549139 AMY2AP04746 511 aa12.48□□□□□ -0.41
CHMP1A-206ENST00000549139 SAA2P0DJI9 122 aaPredicted RBP12.48□□□□□ -0.41
CHMP1A-206ENST00000549139 RPL5P46777 297 aaKnown RBP12.48□□□□□ -0.41
CHMP1A-206ENST00000549139 IGSF11Q5DX21 431 aa12.48□□□□□ -0.41
CHMP1A-206ENST00000549139 UBE2NLQ5JXB2 153 aa12.48□□□□□ -0.41
CHMP1A-206ENST00000549139 Q6ZS46 218 aa12.48□□□□□ -0.41
CHMP1A-206ENST00000549139 OR10J5Q8NHC4 309 aa12.48□□□□□ -0.41
CHMP1A-206ENST00000549139 ACOT12Q8WYK0 555 aa12.48□□□□□ -0.41
CHMP1A-206ENST00000549139 S1PR3Q99500 378 aa12.48□□□□□ -0.41
CHMP1A-206ENST00000549139 ZNF251Q9BRH9 671 aa12.48□□□□□ -0.41
CHMP1A-206ENST00000549139 ST6GALNAC5Q9BVH7 336 aa12.48□□□□□ -0.41
CHMP1A-206ENST00000549139 PARP12Q9H0J9 701 aaKnown RBP12.48□□□□□ -0.41
CHMP1A-206ENST00000549139 SERTAD4Q9NUC0 356 aa12.48□□□□□ -0.41
CHMP1A-206ENST00000549139 RDH8Q9NYR8 311 aa12.48□□□□□ -0.41
CHMP1A-206ENST00000549139 MOB4Q9Y3A3 225 aa12.48□□□□□ -0.41
CHMP1A-206ENST00000549139 IGKV1D-8A0A087WSZ0 117 aa12.47□□□□□ -0.41
CHMP1A-206ENST00000549139 FGF16O43320 207 aa12.47□□□□□ -0.41
CHMP1A-206ENST00000549139 SSX5O60225 188 aa12.47□□□□□ -0.41
CHMP1A-206ENST00000549139 MOSP00540 346 aa12.47□□□□□ -0.41
CHMP1A-206ENST00000549139 CTXN2P0C2S0 81 aa12.47□□□□□ -0.41
CHMP1A-206ENST00000549139 OR3A3P47888 321 aa12.47□□□□□ -0.41
CHMP1A-206ENST00000549139 LSAMPQ13449 338 aa12.47□□□□□ -0.41
CHMP1A-206ENST00000549139 HNF4GQ14541 408 aa12.47□□□□□ -0.41
CHMP1A-206ENST00000549139 NSUN5P1Q3KNT7 163 aa12.47□□□□□ -0.41
CHMP1A-206ENST00000549139 ABCA11PQ4W5N1 156 aa12.47□□□□□ -0.41
CHMP1A-206ENST00000549139 Q8N6K4 173 aa12.47□□□□□ -0.41
CHMP1A-206ENST00000549139 SAMD12Q8N8I0 201 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms