RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 GLRXP35754 106 aa12.87□□□□□ -0.35
CLPTM1-202ENST00000541297 IL13RA2Q14627 380 aa12.87□□□□□ -0.35
CLPTM1-202ENST00000541297 C3orf36Q3SXR2 165 aa12.87□□□□□ -0.35
CLPTM1-202ENST00000541297 PCSK4Q6UW60 755 aa12.87□□□□□ -0.35
CLPTM1-202ENST00000541297 ZNF383Q8NA42 475 aa12.87□□□□□ -0.35
CLPTM1-202ENST00000541297 OR2Z1Q8NG97 314 aa12.87□□□□□ -0.35
CLPTM1-202ENST00000541297 OR11L1Q8NGX0 322 aa12.87□□□□□ -0.35
CLPTM1-202ENST00000541297 TREM2Q9NZC2 230 aa12.87□□□□□ -0.35
CLPTM1-202ENST00000541297 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.86□□□□□ -0.35
CLPTM1-202ENST00000541297 CXCL1P09341 107 aa12.86□□□□□ -0.35
CLPTM1-202ENST00000541297 GPX4P36969 197 aaPredicted RBP12.86□□□□□ -0.35
CLPTM1-202ENST00000541297 HAGHQ16775 308 aa12.86□□□□□ -0.35
CLPTM1-202ENST00000541297 NEK7Q8TDX7 302 aa12.86□□□□□ -0.35
CLPTM1-202ENST00000541297 TMEM171Q8WVE6 324 aa12.86□□□□□ -0.35
CLPTM1-202ENST00000541297 RAB39BQ96DA2 213 aa12.86□□□□□ -0.35
CLPTM1-202ENST00000541297 MSI2Q96DH6 328 aaKnown RBP12.86□□□□□ -0.35
CLPTM1-202ENST00000541297 SLC2A9Q9NRM0 540 aa12.86□□□□□ -0.35
CLPTM1-202ENST00000541297 URGCP-MRPS24S4R325 110 aa12.86□□□□□ -0.35
CLPTM1-202ENST00000541297 S100A2P29034 98 aa12.86□□□□□ -0.35
CLPTM1-202ENST00000541297 TAGLN2P37802 199 aaKnown RBP12.86□□□□□ -0.35
CLPTM1-202ENST00000541297 KLF3P57682 345 aaPredicted RBP12.86□□□□□ -0.35
CLPTM1-202ENST00000541297 EWSR1Q01844 656 aaKnown RBP eCLIP12.86□□□□□ -0.35
CLPTM1-202ENST00000541297 ZNF674Q2M3X9 581 aa12.86□□□□□ -0.35
CLPTM1-202ENST00000541297 TMEM108Q6UXF1 575 aa12.86□□□□□ -0.35
CLPTM1-202ENST00000541297 Q6ZPA2 131 aa12.86□□□□□ -0.35
CLPTM1-202ENST00000541297 C1orf174Q8IYL3 243 aa12.86□□□□□ -0.35
CLPTM1-202ENST00000541297 LRTM2Q8N967 370 aa12.86□□□□□ -0.35
CLPTM1-202ENST00000541297 Q8WTZ3 238 aa12.86□□□□□ -0.35
CLPTM1-202ENST00000541297 WFIKKN1Q96NZ8 548 aa12.86□□□□□ -0.35
CLPTM1-202ENST00000541297 CXXC4Q9H2H0 198 aa12.86□□□□□ -0.35
CLPTM1-202ENST00000541297 GAR1Q9NY12 217 aaKnown RBP12.86□□□□□ -0.35
CLPTM1-202ENST00000541297 POLDIP2Q9Y2S7 368 aa12.86□□□□□ -0.35
CLPTM1-202ENST00000541297 FAM24AA6NFZ4 105 aa12.85□□□□□ -0.35
CLPTM1-202ENST00000541297 NXPH2O95156 264 aa12.85□□□□□ -0.35
CLPTM1-202ENST00000541297 OR2G3Q8NGZ4 309 aa12.85□□□□□ -0.35
CLPTM1-202ENST00000541297 RDH5Q92781 318 aa12.85□□□□□ -0.35
CLPTM1-202ENST00000541297 SUCNR1Q9BXA5 334 aa12.85□□□□□ -0.35
CLPTM1-202ENST00000541297 CACNA1DQ01668 2161 aa12.85□□□□□ -0.35
CLPTM1-202ENST00000541297 NKX2-6A6NCS4 301 aa12.85□□□□□ -0.35
CLPTM1-202ENST00000541297 DPRXA6NFQ7 191 aa12.85□□□□□ -0.35
CLPTM1-202ENST00000541297 TMEM210A6NLX4 147 aa12.85□□□□□ -0.35
CLPTM1-202ENST00000541297 PHF1O43189 567 aaPredicted RBP12.85□□□□□ -0.35
CLPTM1-202ENST00000541297 RND3P61587 244 aa12.85□□□□□ -0.35
CLPTM1-202ENST00000541297 BSPH1Q075Z2 132 aa12.85□□□□□ -0.35
CLPTM1-202ENST00000541297 ELOBQ15370 118 aa12.85□□□□□ -0.35
CLPTM1-202ENST00000541297 C21orf62-AS1Q17RA5 79 aa12.85□□□□□ -0.35
CLPTM1-202ENST00000541297 SPSB3Q6PJ21 355 aa12.85□□□□□ -0.35
CLPTM1-202ENST00000541297 SLC22A25Q6T423 547 aa12.85□□□□□ -0.35
CLPTM1-202ENST00000541297 SPNS3Q6ZMD2 512 aa12.85□□□□□ -0.35
CLPTM1-202ENST00000541297 LRBAP50851 2863 aa12.85□□□□□ -0.35
CLPTM1-202ENST00000541297 FAM90A10PA6NDY2 464 aa12.84□□□□□ -0.35
CLPTM1-202ENST00000541297 FAM90A18PA6NE21 464 aa12.84□□□□□ -0.35
CLPTM1-202ENST00000541297 FAM90A16PA6NEW6 464 aa12.84□□□□□ -0.35
CLPTM1-202ENST00000541297 FAM90A20PA6NIJ5 464 aa12.84□□□□□ -0.35
CLPTM1-202ENST00000541297 FAM90A8PA6NJQ4 464 aa12.84□□□□□ -0.35
CLPTM1-202ENST00000541297 FAM90A7PA6NKC0 464 aa12.84□□□□□ -0.35
CLPTM1-202ENST00000541297 FAM90A22PA8MWA6 464 aa12.84□□□□□ -0.35
CLPTM1-202ENST00000541297 FAM90A12PA8MX19 464 aa12.84□□□□□ -0.35
CLPTM1-202ENST00000541297 FAM90A5PA8MXJ8 464 aa12.84□□□□□ -0.35
CLPTM1-202ENST00000541297 FAM90A23PA8MXZ1 464 aa12.84□□□□□ -0.35
CLPTM1-202ENST00000541297 HSD17B6O14756 317 aa12.84□□□□□ -0.35
CLPTM1-202ENST00000541297 WNT9BO14905 357 aa12.84□□□□□ -0.35
CLPTM1-202ENST00000541297 FAM90A15PP0C7V4 464 aa12.84□□□□□ -0.35
CLPTM1-202ENST00000541297 FAM90A13PP0C7W8 464 aa12.84□□□□□ -0.35
CLPTM1-202ENST00000541297 FAM90A14PP0C7W9 464 aa12.84□□□□□ -0.35
CLPTM1-202ENST00000541297 FAM90A24PP0C7X0 464 aa12.84□□□□□ -0.35
CLPTM1-202ENST00000541297 PGA5P0DJD9 388 aa12.84□□□□□ -0.35
CLPTM1-202ENST00000541297 SFTPCP11686 197 aa12.84□□□□□ -0.35
CLPTM1-202ENST00000541297 ATP6V0CP27449 155 aa12.84□□□□□ -0.35
CLPTM1-202ENST00000541297 MPV17LQ2QL34 196 aa12.84□□□□□ -0.35
CLPTM1-202ENST00000541297 C5orf24Q7Z6I8 188 aa12.84□□□□□ -0.35
CLPTM1-202ENST00000541297 C11orf53Q8IXP5 236 aa12.84□□□□□ -0.35
CLPTM1-202ENST00000541297 LGI3Q8N145 548 aa12.84□□□□□ -0.35
CLPTM1-202ENST00000541297 MRPL37Q9BZE1 423 aaKnown RBP12.84□□□□□ -0.35
CLPTM1-202ENST00000541297 IGHV3-13P01766 116 aa12.84□□□□□ -0.35
CLPTM1-202ENST00000541297 OMGP23515 440 aa12.84□□□□□ -0.35
CLPTM1-202ENST00000541297 ERVFRD-1P60508 538 aa12.84□□□□□ -0.35
CLPTM1-202ENST00000541297 UBE2KP61086 200 aa12.84□□□□□ -0.35
CLPTM1-202ENST00000541297 DEFA6Q01524 100 aa12.84□□□□□ -0.35
CLPTM1-202ENST00000541297 GNMTQ14749 295 aa12.84□□□□□ -0.35
CLPTM1-202ENST00000541297 MEX3BQ6ZN04 569 aaKnown RBP12.84□□□□□ -0.35
CLPTM1-202ENST00000541297 PLK3Q9H4B4 646 aa12.84□□□□□ -0.35
CLPTM1-202ENST00000541297 SMDT1Q9H4I9 107 aa12.84□□□□□ -0.35
CLPTM1-202ENST00000541297 SPRY3O43610 288 aa12.83□□□□□ -0.35
CLPTM1-202ENST00000541297 SRP19P09132 144 aaKnown RBP12.83□□□□□ -0.35
CLPTM1-202ENST00000541297 GRNP28799 593 aaKnown RBP12.83□□□□□ -0.35
CLPTM1-202ENST00000541297 CEBPDP49716 269 aaPredicted RBP12.83□□□□□ -0.35
CLPTM1-202ENST00000541297 DLK1P80370 383 aa12.83□□□□□ -0.35
CLPTM1-202ENST00000541297 CDSNQ15517 529 aa12.83□□□□□ -0.35
CLPTM1-202ENST00000541297 SPRNQ5BIV9 151 aa12.83□□□□□ -0.35
CLPTM1-202ENST00000541297 OR2C3Q8N628 320 aa12.83□□□□□ -0.35
CLPTM1-202ENST00000541297 SLC35G3Q8N808 338 aa12.83□□□□□ -0.35
CLPTM1-202ENST00000541297 OR4D5Q8NGN0 318 aa12.83□□□□□ -0.35
CLPTM1-202ENST00000541297 OR10D4PQ8NGN7 298 aa12.83□□□□□ -0.35
CLPTM1-202ENST00000541297 OR14J1Q9UGF5 321 aa12.83□□□□□ -0.35
CLPTM1-202ENST00000541297 TGIF2-C20orf24A0A0A6YYL0 155 aa12.83□□□□□ -0.36
CLPTM1-202ENST00000541297 TRAV24A0A0B4J272 114 aa12.83□□□□□ -0.36
CLPTM1-202ENST00000541297 SIRPB1O00241 398 aa12.83□□□□□ -0.36
CLPTM1-202ENST00000541297 DTYMKP23919 212 aa12.83□□□□□ -0.36
CLPTM1-202ENST00000541297 ERVK11-1P61568 191 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms