RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 KCTD7Q96MP8 289 aa1.88□□□□□ -2.11
PRKDC-205ENST00000535375 OR8B2Q96RD0 313 aa1.88□□□□□ -2.11
PRKDC-205ENST00000535375 DHRS9Q9BPW9 319 aa1.88□□□□□ -2.11
PRKDC-205ENST00000535375 HIGD2AQ9BW72 106 aa1.88□□□□□ -2.11
PRKDC-205ENST00000535375 BCL2L14Q9BZR8 327 aa1.88□□□□□ -2.11
PRKDC-205ENST00000535375 MED28Q9H204 178 aa1.88□□□□□ -2.11
PRKDC-205ENST00000535375 FAM206AQ9NX38 181 aa1.88□□□□□ -2.11
PRKDC-205ENST00000535375 WASHC3Q9Y3C0 194 aa1.88□□□□□ -2.11
PRKDC-205ENST00000535375 A0A1W2PP64 1363 aa1.87□□□□□ -2.11
PRKDC-205ENST00000535375 TEX50A0A1B0GTY4 177 aa1.87□□□□□ -2.11
PRKDC-205ENST00000535375 COPEO14579 308 aa1.87□□□□□ -2.11
PRKDC-205ENST00000535375 NIPSNAP2O75323 286 aa1.87□□□□□ -2.11
PRKDC-205ENST00000535375 ORM2P19652 201 aa1.87□□□□□ -2.11
PRKDC-205ENST00000535375 CXCL2P19875 107 aa1.87□□□□□ -2.11
PRKDC-205ENST00000535375 MAGEA2P43356 314 aa1.87□□□□□ -2.11
PRKDC-205ENST00000535375 SNAP25P60880 206 aa1.87□□□□□ -2.11
PRKDC-205ENST00000535375 TMEM267Q0VDI3 215 aaPredicted RBP1.87□□□□□ -2.11
PRKDC-205ENST00000535375 TSPAN31Q12999 210 aa1.87□□□□□ -2.11
PRKDC-205ENST00000535375 MLLT11Q13015 90 aaPredicted RBP1.87□□□□□ -2.11
PRKDC-205ENST00000535375 PDK2Q15119 407 aa1.87□□□□□ -2.11
PRKDC-205ENST00000535375 ACSBG2Q5FVE4 666 aa1.87□□□□□ -2.11
PRKDC-205ENST00000535375 TMPPEQ6ZT21 453 aa1.87□□□□□ -2.11
PRKDC-205ENST00000535375 OR10D4PQ8NGN7 298 aa1.87□□□□□ -2.11
PRKDC-205ENST00000535375 ABHD14BQ96IU4 210 aa1.87□□□□□ -2.11
PRKDC-205ENST00000535375 NSRP1Q9H0G5 558 aaKnown RBP1.87□□□□□ -2.11
PRKDC-205ENST00000535375 FIS1Q9Y3D6 152 aa1.87□□□□□ -2.11
PRKDC-205ENST00000535375 IGSF23A1L1A6 192 aa1.86□□□□□ -2.11
PRKDC-205ENST00000535375 SDHAF1A6NFY7 115 aa1.86□□□□□ -2.11
PRKDC-205ENST00000535375 K7EQS6 105 aa1.86□□□□□ -2.11
PRKDC-205ENST00000535375 PSMG1O95456 288 aa1.86□□□□□ -2.11
PRKDC-205ENST00000535375 CXCL3P19876 107 aa1.86□□□□□ -2.11
PRKDC-205ENST00000535375 CRABP1P29762 137 aa1.86□□□□□ -2.11
PRKDC-205ENST00000535375 FUSP35637 526 aaKnown RBP eCLIP1.86□□□□□ -2.11
PRKDC-205ENST00000535375 CDC34P49427 236 aaPredicted RBP1.86□□□□□ -2.11
PRKDC-205ENST00000535375 DAPP51397 102 aa1.86□□□□□ -2.11
PRKDC-205ENST00000535375 AKR1C2P52895 323 aa1.86□□□□□ -2.11
PRKDC-205ENST00000535375 ACTBP60709 375 aa1.86□□□□□ -2.11
PRKDC-205ENST00000535375 ACTG1P63261 375 aa1.86□□□□□ -2.11
PRKDC-205ENST00000535375 UBE2IP63279 158 aaKnown RBP1.86□□□□□ -2.11
PRKDC-205ENST00000535375 HPCAP84074 193 aa1.86□□□□□ -2.11
PRKDC-205ENST00000535375 DEFA6Q01524 100 aa1.86□□□□□ -2.11
PRKDC-205ENST00000535375 MRPL51Q4U2R6 128 aaKnown RBP1.86□□□□□ -2.11
PRKDC-205ENST00000535375 SDIM1Q6ZPB5 146 aa1.86□□□□□ -2.11
PRKDC-205ENST00000535375 NATD1Q8N6N6 113 aa1.86□□□□□ -2.11
PRKDC-205ENST00000535375 OR2V1Q8NHB1 315 aa1.86□□□□□ -2.11
PRKDC-205ENST00000535375 HAVCR2Q8TDQ0 301 aa1.86□□□□□ -2.11
PRKDC-205ENST00000535375 CYGBQ8WWM9 190 aa1.86□□□□□ -2.11
PRKDC-205ENST00000535375 MED18Q9BUE0 208 aa1.86□□□□□ -2.11
PRKDC-205ENST00000535375 KRTAP4-1Q9BYQ7 146 aa1.86□□□□□ -2.11
PRKDC-205ENST00000535375 EIF5A2Q9GZV4 153 aaKnown RBP1.86□□□□□ -2.11
PRKDC-205ENST00000535375 DRC3Q9H069 523 aa1.86□□□□□ -2.11
PRKDC-205ENST00000535375 C11orf1Q9H5F2 150 aa1.86□□□□□ -2.11
PRKDC-205ENST00000535375 LOC102725191A0A1B0GVB3 256 aa1.85□□□□□ -2.11
PRKDC-205ENST00000535375 C17orf98A8MV24 154 aa1.85□□□□□ -2.11
PRKDC-205ENST00000535375 A8MWP6 167 aa1.85□□□□□ -2.11
PRKDC-205ENST00000535375 DEXIO95424 95 aa1.85□□□□□ -2.11
PRKDC-205ENST00000535375 HLA-DRAP01903 254 aa1.85□□□□□ -2.11
PRKDC-205ENST00000535375 OCM2P0CE71 109 aa1.85□□□□□ -2.11
PRKDC-205ENST00000535375 CXCR4P61073 352 aa1.85□□□□□ -2.11
PRKDC-205ENST00000535375 RPS24P62847 133 aaKnown RBP1.85□□□□□ -2.11
PRKDC-205ENST00000535375 HERVK_113P63121 156 aa1.85□□□□□ -2.11
PRKDC-205ENST00000535375 EBPQ15125 230 aaKnown RBP1.85□□□□□ -2.11
PRKDC-205ENST00000535375 CST6Q15828 149 aa1.85□□□□□ -2.11
PRKDC-205ENST00000535375 NOXRED1Q6NXP6 359 aa1.85□□□□□ -2.11
PRKDC-205ENST00000535375 LMX1AQ8TE12 382 aa1.85□□□□□ -2.11
PRKDC-205ENST00000535375 DERL2Q9GZP9 239 aa1.85□□□□□ -2.11
PRKDC-205ENST00000535375 C16orf95Q9H693 158 aa1.85□□□□□ -2.11
PRKDC-205ENST00000535375 USE1Q9NZ43 259 aa1.85□□□□□ -2.11
PRKDC-205ENST00000535375 ABCC11Q96J66 1382 aa1.85□□□□□ -2.11
PRKDC-205ENST00000535375 SHANK3Q9BYB0 1731 aa1.84□□□□□ -2.11
PRKDC-205ENST00000535375 LINC00862A6NCI5 91 aa1.84□□□□□ -2.11
PRKDC-205ENST00000535375 SLC16A4O15374 487 aa1.84□□□□□ -2.11
PRKDC-205ENST00000535375 STK16O75716 305 aa1.84□□□□□ -2.11
PRKDC-205ENST00000535375 IL6P05231 212 aa1.84□□□□□ -2.11
PRKDC-205ENST00000535375 CD7P09564 240 aa1.84□□□□□ -2.11
PRKDC-205ENST00000535375 SLC35A2P78381 396 aa1.84□□□□□ -2.11
PRKDC-205ENST00000535375 FABP5Q01469 135 aa1.84□□□□□ -2.11
PRKDC-205ENST00000535375 SPIN4Q56A73 249 aa1.84□□□□□ -2.11
PRKDC-205ENST00000535375 ATP5L2Q7Z4Y8 100 aa1.84□□□□□ -2.11
PRKDC-205ENST00000535375 ZNF567Q8N184 647 aa1.84□□□□□ -2.11
PRKDC-205ENST00000535375 TMBIM1Q969X1 311 aa1.84□□□□□ -2.11
PRKDC-205ENST00000535375 TBX5Q99593 518 aa1.84□□□□□ -2.11
PRKDC-205ENST00000535375 TIPINQ9BVW5 301 aa1.84□□□□□ -2.11
PRKDC-205ENST00000535375 CDCA4Q9BXL8 241 aa1.84□□□□□ -2.11
PRKDC-205ENST00000535375 SMDT1Q9H4I9 107 aa1.84□□□□□ -2.11
PRKDC-205ENST00000535375 DNAJC12Q9UKB3 198 aa1.84□□□□□ -2.11
PRKDC-205ENST00000535375 HHLA2Q9UM44 414 aa1.84□□□□□ -2.11
PRKDC-205ENST00000535375 HEY1Q9Y5J3 304 aa1.84□□□□□ -2.11
PRKDC-205ENST00000535375 ATAD5Q96QE3 1844 aa1.84□□□□□ -2.12
PRKDC-205ENST00000535375 PLXNB1O43157 2135 aa1.84□□□□□ -2.12
PRKDC-205ENST00000535375 PLCH2O75038 1416 aa1.83□□□□□ -2.12
PRKDC-205ENST00000535375 TRAV8-1A0A0A6YYK1 113 aa1.83□□□□□ -2.12
PRKDC-205ENST00000535375 CXCR6O00574 342 aa1.83□□□□□ -2.12
PRKDC-205ENST00000535375 MRASO14807 208 aa1.83□□□□□ -2.12
PRKDC-205ENST00000535375 SSNA1O43805 119 aa1.83□□□□□ -2.12
PRKDC-205ENST00000535375 TYMSP04818 313 aa1.83□□□□□ -2.12
PRKDC-205ENST00000535375 CRYGDP07320 174 aa1.83□□□□□ -2.12
PRKDC-205ENST00000535375 CBR1P16152 277 aa1.83□□□□□ -2.12
PRKDC-205ENST00000535375 OR10J1P30954 320 aa1.83□□□□□ -2.12
PRKDC-205ENST00000535375 TSPEAR-AS2P59090 65 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms