RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 FAM157CP0CG43 387 aa14.01□□□□□ -0.17
PCDHA3-201ENST00000522353 FAM106AQ4KMX7 169 aa14.01□□□□□ -0.17
PCDHA3-201ENST00000522353 DCAF12L2Q5VW00 463 aa14.01□□□□□ -0.17
PCDHA3-201ENST00000522353 RCC2Q9P258 522 aaKnown RBP14.01□□□□□ -0.17
PCDHA3-201ENST00000522353 LHFPL6Q9Y693 200 aa14.01□□□□□ -0.17
PCDHA3-201ENST00000522353 CYB5R3P00387 301 aaPredicted RBP14□□□□□ -0.17
PCDHA3-201ENST00000522353 TMEM97Q5BJF2 176 aa14□□□□□ -0.17
PCDHA3-201ENST00000522353 DNM1P46Q6ZS02 220 aa14□□□□□ -0.17
PCDHA3-201ENST00000522353 GTF2H5Q6ZYL4 71 aa14□□□□□ -0.17
PCDHA3-201ENST00000522353 OR10D4PQ8NGN7 298 aa14□□□□□ -0.17
PCDHA3-201ENST00000522353 OR4C12Q96R67 309 aa14□□□□□ -0.17
PCDHA3-201ENST00000522353 NPVFQ9HCQ7 196 aa14□□□□□ -0.17
PCDHA3-201ENST00000522353 C4orf51C9J302 202 aa14□□□□□ -0.17
PCDHA3-201ENST00000522353 OR10C1Q96KK4 312 aa14□□□□□ -0.17
PCDHA3-201ENST00000522353 RALYQ9UKM9 306 aaKnown RBP14□□□□□ -0.17
PCDHA3-201ENST00000522353 PDE6DO43924 150 aa14□□□□□ -0.17
PCDHA3-201ENST00000522353 RECKO95980 971 aa14□□□□□ -0.17
PCDHA3-201ENST00000522353 CXorf1O96002 111 aa14□□□□□ -0.17
PCDHA3-201ENST00000522353 PTGDSP41222 190 aa14□□□□□ -0.17
PCDHA3-201ENST00000522353 STPG2Q8N412 459 aa14□□□□□ -0.17
PCDHA3-201ENST00000522353 FAM57AQ8TBR7 257 aa14□□□□□ -0.17
PCDHA3-201ENST00000522353 GDF9O60383 454 aa14□□□□□ -0.17
PCDHA3-201ENST00000522353 SCGB1C2P0DMR2 95 aa14□□□□□ -0.17
PCDHA3-201ENST00000522353 KIR2DL2P43627 348 aaPredicted RBP14□□□□□ -0.17
PCDHA3-201ENST00000522353 VAX1Q5SQQ9 334 aa14□□□□□ -0.17
PCDHA3-201ENST00000522353 TMEM45BQ96B21 275 aa14□□□□□ -0.17
PCDHA3-201ENST00000522353 ABHD14BQ96IU4 210 aa14□□□□□ -0.17
PCDHA3-201ENST00000522353 CTXND1A0A1B0GTU2 59 aa13.99□□□□□ -0.17
PCDHA3-201ENST00000522353 A1L4Q6 167 aa13.99□□□□□ -0.17
PCDHA3-201ENST00000522353 MFSD2BA6NFX1 497 aa13.99□□□□□ -0.17
PCDHA3-201ENST00000522353 TNFSF10P50591 281 aa13.99□□□□□ -0.17
PCDHA3-201ENST00000522353 EFNB2P52799 333 aa13.99□□□□□ -0.17
PCDHA3-201ENST00000522353 CHAC2Q8WUX2 184 aa13.99□□□□□ -0.17
PCDHA3-201ENST00000522353 SCMH1Q96GD3 660 aa13.99□□□□□ -0.17
PCDHA3-201ENST00000522353 IGHV3-21A0A0B4J1V1 117 aa13.99□□□□□ -0.17
PCDHA3-201ENST00000522353 WNT9BO14905 357 aa13.99□□□□□ -0.17
PCDHA3-201ENST00000522353 PLA2G10O15496 165 aa13.99□□□□□ -0.17
PCDHA3-201ENST00000522353 APCDD1LQ8NCL9 501 aa13.99□□□□□ -0.17
PCDHA3-201ENST00000522353 VWCEQ96DN2 955 aa13.99□□□□□ -0.17
PCDHA3-201ENST00000522353 CLEC7AQ9BXN2 247 aa13.99□□□□□ -0.17
PCDHA3-201ENST00000522353 DSPPQ9NZW4 1301 aa13.99□□□□□ -0.17
PCDHA3-201ENST00000522353 ATAD5Q96QE3 1844 aa13.99□□□□□ -0.17
PCDHA3-201ENST00000522353 ZNF729A6NN14 1252 aaPredicted RBP13.99□□□□□ -0.17
PCDHA3-201ENST00000522353 SS18L1O75177 396 aaPredicted RBP13.99□□□□□ -0.17
PCDHA3-201ENST00000522353 SEC11BP0C7V7 166 aa13.99□□□□□ -0.17
PCDHA3-201ENST00000522353 CXCL3P19876 107 aa13.99□□□□□ -0.17
PCDHA3-201ENST00000522353 TMEM183BQ1AE95 376 aa13.99□□□□□ -0.17
PCDHA3-201ENST00000522353 TMEM116Q8NCL8 245 aa13.99□□□□□ -0.17
PCDHA3-201ENST00000522353 SIRT7Q9NRC8 400 aa13.99□□□□□ -0.17
PCDHA3-201ENST00000522353 CDRT15L2A8MXV6 281 aa13.99□□□□□ -0.17
PCDHA3-201ENST00000522353 ABHD12Q8N2K0 398 aa13.99□□□□□ -0.17
PCDHA3-201ENST00000522353 NEU4Q8WWR8 484 aaPredicted RBP13.99□□□□□ -0.17
PCDHA3-201ENST00000522353 SIGLEC12Q96PQ1 595 aa13.99□□□□□ -0.17
PCDHA3-201ENST00000522353 WNT5BQ9H1J7 359 aa13.99□□□□□ -0.17
PCDHA3-201ENST00000522353 CEACAM18A8MTB9 384 aa13.99□□□□□ -0.17
PCDHA3-201ENST00000522353 HAX1O00165 279 aa13.99□□□□□ -0.17
PCDHA3-201ENST00000522353 C10orf128Q5T292 105 aa13.99□□□□□ -0.17
PCDHA3-201ENST00000522353 FDX2Q6P4F2 183 aa13.99□□□□□ -0.17
PCDHA3-201ENST00000522353 ZNF645Q8N7E2 425 aa13.99□□□□□ -0.17
PCDHA3-201ENST00000522353 FOCADQ5VW36 1801 aa13.98□□□□□ -0.17
PCDHA3-201ENST00000522353 TDRD6O60522 2096 aaKnown RBP13.98□□□□□ -0.17
PCDHA3-201ENST00000522353 H0Y980 276 aa13.98□□□□□ -0.17
PCDHA3-201ENST00000522353 MFNGO00587 321 aa13.98□□□□□ -0.17
PCDHA3-201ENST00000522353 ADAM11O75078 769 aa13.98□□□□□ -0.17
PCDHA3-201ENST00000522353 PGA5P0DJD9 388 aa13.98□□□□□ -0.17
PCDHA3-201ENST00000522353 TMEM186Q96B77 213 aa13.98□□□□□ -0.17
PCDHA3-201ENST00000522353 DLL3Q9NYJ7 618 aa13.98□□□□□ -0.17
PCDHA3-201ENST00000522353 KCNE5Q9UJ90 142 aa13.98□□□□□ -0.17
PCDHA3-201ENST00000522353 JPT1Q9UK76 154 aa13.98□□□□□ -0.17
PCDHA3-201ENST00000522353 TRBV5-5A0A0J9YX44 114 aa13.98□□□□□ -0.17
PCDHA3-201ENST00000522353 TMEM218A2RU14 115 aa13.98□□□□□ -0.17
PCDHA3-201ENST00000522353 BMPR1BO00238 502 aa13.98□□□□□ -0.17
PCDHA3-201ENST00000522353 CD40P25942 277 aa13.98□□□□□ -0.17
PCDHA3-201ENST00000522353 RNF151Q2KHN1 245 aa13.98□□□□□ -0.17
PCDHA3-201ENST00000522353 EIF4E3Q8N5X7 224 aaKnown RBP13.98□□□□□ -0.17
PCDHA3-201ENST00000522353 ADAD2Q8NCV1 583 aaKnown RBP13.98□□□□□ -0.17
PCDHA3-201ENST00000522353 CD1BP29016 333 aa13.98□□□□□ -0.17
PCDHA3-201ENST00000522353 CEBPEQ15744 281 aa13.98□□□□□ -0.17
PCDHA3-201ENST00000522353 C1orf162Q8NEQ5 155 aaPredicted RBP13.98□□□□□ -0.17
PCDHA3-201ENST00000522353 HELTA6NFD8 242 aa13.98□□□□□ -0.17
PCDHA3-201ENST00000522353 ZNF735P0CB33 412 aa13.98□□□□□ -0.17
PCDHA3-201ENST00000522353 MUC1P15941 1255 aaPredicted RBP13.98□□□□□ -0.17
PCDHA3-201ENST00000522353 CRISP2P16562 243 aa13.98□□□□□ -0.17
PCDHA3-201ENST00000522353 SLC25A53Q5H9E4 307 aa13.98□□□□□ -0.17
PCDHA3-201ENST00000522353 OR10J6PQ8NGY7 276 aa13.98□□□□□ -0.17
PCDHA3-201ENST00000522353 GUCD1Q96NT3 240 aa13.98□□□□□ -0.17
PCDHA3-201ENST00000522353 LPAR5Q9H1C0 372 aa13.98□□□□□ -0.17
PCDHA3-201ENST00000522353 CHCHD2Q9Y6H1 151 aaPredicted RBP13.98□□□□□ -0.17
PCDHA3-201ENST00000522353 ACACAQ13085 2346 aa13.97□□□□□ -0.17
PCDHA3-201ENST00000522353 TM4SF20Q53R12 229 aa13.97□□□□□ -0.17
PCDHA3-201ENST00000522353 TMEM78Q5T7P6 136 aa13.97□□□□□ -0.17
PCDHA3-201ENST00000522353 NUP37Q8NFH4 326 aa13.97□□□□□ -0.17
PCDHA3-201ENST00000522353 DCTN5Q9BTE1 182 aa13.97□□□□□ -0.17
PCDHA3-201ENST00000522353 SRD5A3Q9H8P0 318 aa13.97□□□□□ -0.17
PCDHA3-201ENST00000522353 RGPD3A6NKT7 1758 aaPredicted RBP13.97□□□□□ -0.17
PCDHA3-201ENST00000522353 AWAT1Q58HT5 328 aa13.97□□□□□ -0.17
PCDHA3-201ENST00000522353 DPPA3Q6W0C5 159 aa13.97□□□□□ -0.17
PCDHA3-201ENST00000522353 VPS25Q9BRG1 176 aa13.97□□□□□ -0.17
PCDHA3-201ENST00000522353 PAXXQ9BUH6 204 aa13.97□□□□□ -0.17
PCDHA3-201ENST00000522353 MPDU1O75352 247 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 236.1 ms