RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 RAP1GDS1P52306 607 aa1.89□□□□□ -2.11
SCARNA15.2-201ENST00000516409 KLF3P57682 345 aaPredicted RBP1.89□□□□□ -2.11
SCARNA15.2-201ENST00000516409 RANP62826 216 aaKnown RBP1.89□□□□□ -2.11
SCARNA15.2-201ENST00000516409 PRDX4Q13162 271 aa1.89□□□□□ -2.11
SCARNA15.2-201ENST00000516409 IHHQ14623 411 aa1.89□□□□□ -2.11
SCARNA15.2-201ENST00000516409 HIST2H3PS2Q5TEC6 136 aa1.89□□□□□ -2.11
SCARNA15.2-201ENST00000516409 TMEM136Q6ZRR5 245 aa1.89□□□□□ -2.11
SCARNA15.2-201ENST00000516409 LRP11Q86VZ4 500 aa1.89□□□□□ -2.11
SCARNA15.2-201ENST00000516409 OTUB2Q96DC9 234 aa1.89□□□□□ -2.11
SCARNA15.2-201ENST00000516409 PYURFQ96I23 114 aa1.89□□□□□ -2.11
SCARNA15.2-201ENST00000516409 PRAP1Q96NZ9 151 aa1.89□□□□□ -2.11
SCARNA15.2-201ENST00000516409 SCRT1Q9BWW7 348 aa1.89□□□□□ -2.11
SCARNA15.2-201ENST00000516409 PECRQ9BY49 303 aa1.89□□□□□ -2.11
SCARNA15.2-201ENST00000516409 SLC2A9Q9NRM0 540 aa1.89□□□□□ -2.11
SCARNA15.2-201ENST00000516409 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.89□□□□□ -2.11
SCARNA15.2-201ENST00000516409 EMC3Q9P0I2 261 aa1.89□□□□□ -2.11
SCARNA15.2-201ENST00000516409 SLC23A2Q9UGH3 650 aa1.89□□□□□ -2.11
SCARNA15.2-201ENST00000516409 SLC22A13Q9Y226 551 aa1.89□□□□□ -2.11
SCARNA15.2-201ENST00000516409 MRPS16Q9Y3D3 137 aaKnown RBP1.89□□□□□ -2.11
SCARNA15.2-201ENST00000516409 LSM5Q9Y4Y9 91 aaKnown RBP1.89□□□□□ -2.11
SCARNA15.2-201ENST00000516409 PCYT1BQ9Y5K3 369 aaPredicted RBP1.89□□□□□ -2.11
SCARNA15.2-201ENST00000516409 PLCH2O75038 1416 aa1.89□□□□□ -2.11
SCARNA15.2-201ENST00000516409 CHD2O14647 1828 aaKnown RBP1.89□□□□□ -2.11
SCARNA15.2-201ENST00000516409 KIF15Q9NS87 1388 aa1.88□□□□□ -2.11
SCARNA15.2-201ENST00000516409 IGKV3-11P04433 115 aa1.88□□□□□ -2.11
SCARNA15.2-201ENST00000516409 PFN1P07737 140 aaKnown RBP1.88□□□□□ -2.11
SCARNA15.2-201ENST00000516409 HSD11B1P28845 292 aa1.88□□□□□ -2.11
SCARNA15.2-201ENST00000516409 DDTP30046 118 aa1.88□□□□□ -2.11
SCARNA15.2-201ENST00000516409 OR10J1P30954 320 aa1.88□□□□□ -2.11
SCARNA15.2-201ENST00000516409 S100A5P33763 92 aa1.88□□□□□ -2.11
SCARNA15.2-201ENST00000516409 MAP2K4P45985 399 aa1.88□□□□□ -2.11
SCARNA15.2-201ENST00000516409 SLCO1A2P46721 670 aa1.88□□□□□ -2.11
SCARNA15.2-201ENST00000516409 OMPP47874 163 aa1.88□□□□□ -2.11
SCARNA15.2-201ENST00000516409 MRPS25P82663 173 aaKnown RBP1.88□□□□□ -2.11
SCARNA15.2-201ENST00000516409 EBPQ15125 230 aaKnown RBP1.88□□□□□ -2.11
SCARNA15.2-201ENST00000516409 ACSBG2Q5FVE4 666 aa1.88□□□□□ -2.11
SCARNA15.2-201ENST00000516409 C10orf91Q5T1B1 145 aa1.88□□□□□ -2.11
SCARNA15.2-201ENST00000516409 C1orf194Q5T5A4 169 aa1.88□□□□□ -2.11
SCARNA15.2-201ENST00000516409 ZNF660Q6AZW8 331 aaPredicted RBP1.88□□□□□ -2.11
SCARNA15.2-201ENST00000516409 SPINT4Q6UDR6 99 aa1.88□□□□□ -2.11
SCARNA15.2-201ENST00000516409 HIST2H3AQ71DI3 136 aa1.88□□□□□ -2.11
SCARNA15.2-201ENST00000516409 HMGN2P46Q86SG4 172 aa1.88□□□□□ -2.11
SCARNA15.2-201ENST00000516409 C1orf174Q8IYL3 243 aa1.88□□□□□ -2.11
SCARNA15.2-201ENST00000516409 RNF182Q8N6D2 247 aa1.88□□□□□ -2.11
SCARNA15.2-201ENST00000516409 UBL4BQ8N7F7 174 aa1.88□□□□□ -2.11
SCARNA15.2-201ENST00000516409 ZNF721Q8TF20 911 aa1.88□□□□□ -2.11
SCARNA15.2-201ENST00000516409 IMP4Q96G21 291 aaKnown RBP1.88□□□□□ -2.11
SCARNA15.2-201ENST00000516409 DIRAS2Q96HU8 199 aa1.88□□□□□ -2.11
SCARNA15.2-201ENST00000516409 ANKRD36BP1Q96IX9 119 aa1.88□□□□□ -2.11
SCARNA15.2-201ENST00000516409 TAS2R1Q9NYW7 299 aa1.88□□□□□ -2.11
SCARNA15.2-201ENST00000516409 CARHSP1Q9Y2V2 147 aaKnown RBP1.88□□□□□ -2.11
SCARNA15.2-201ENST00000516409 LINC00588Q9Y4M8 146 aa1.88□□□□□ -2.11
SCARNA15.2-201ENST00000516409 CRB1P82279 1406 aa1.88□□□□□ -2.11
SCARNA15.2-201ENST00000516409 ARID1AO14497 2285 aa1.88□□□□□ -2.11
SCARNA15.2-201ENST00000516409 SNAPC4Q5SXM2 1469 aa1.88□□□□□ -2.11
SCARNA15.2-201ENST00000516409 LINC00862A6NCI5 91 aa1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 GOLGA6L4A6NEF3 574 aa1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 CLDN24A6NM45 220 aa1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 KPNA3O00505 521 aaPredicted RBP1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 LECT2O14960 151 aa1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 SH2D1AO60880 128 aa1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 IGLV3-27P01718 113 aa1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 OPN1SWP03999 348 aa1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 ALOX5APP20292 161 aa1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 CCL1P22362 96 aa1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 PPP1R2P41236 205 aa1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 CA7P43166 264 aa1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 SULT1A1P50225 295 aa1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 IDH3GP51553 393 aaPredicted RBP1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 TMEM33P57088 247 aa1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 SPCS3P61009 180 aa1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 ERVS71-1P61550 626 aa1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 CCL7P80098 99 aa1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 EMX1Q04741 257 aaPredicted RBP1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 SRSF6Q13247 344 aaKnown RBP1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 HIST3H3Q16695 136 aa1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 LGALSLQ3ZCW2 172 aaPredicted RBP1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 DNLZQ5SXM8 178 aa1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 FAM78BQ5VT40 261 aa1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 SPOPLQ6IQ16 392 aa1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 PPP1R2P3Q6NXS1 205 aa1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 NIT1Q86X76 327 aa1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 BAP18Q8IXM2 172 aa1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 TMEM86BQ8N661 226 aa1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 CLDN22Q8N7P3 220 aa1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 HIST1H2BAQ96A08 127 aa1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 RMI2Q96E14 147 aa1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 ZNF2Q9BSG1 426 aaPredicted RBP1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 OR51I2Q9H344 312 aa1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 IL20Q9NYY1 176 aa1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 VPS29Q9UBQ0 182 aa1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 YLPM1P49750 1951 aaKnown RBP1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 TRIP11Q15643 1979 aa1.87□□□□□ -2.11
SCARNA15.2-201ENST00000516409 IGLV2-18A0A075B6J9 118 aa1.86□□□□□ -2.11
SCARNA15.2-201ENST00000516409 TRBV24-1A0A075B6N3 115 aa1.86□□□□□ -2.11
SCARNA15.2-201ENST00000516409 IGKV1D-37A0A075B6S9 117 aa1.86□□□□□ -2.11
SCARNA15.2-201ENST00000516409 SMIM9A6NGZ8 99 aa1.86□□□□□ -2.11
SCARNA15.2-201ENST00000516409 D6RAR5 112 aa1.86□□□□□ -2.11
SCARNA15.2-201ENST00000516409 GSTZ1O43708 216 aaPredicted RBP1.86□□□□□ -2.11
SCARNA15.2-201ENST00000516409 SLC25A20O43772 301 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms