RNA–Protein interactions for RNA: ENST00000509638.5

LIMCH1-211, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-211ENST00000509638 OR8U1Q8NH10 309 aa23.92■■□□□ 1.42
LIMCH1-211ENST00000509638 ZNF418Q8TF45 676 aaPredicted RBP23.92■■□□□ 1.42
LIMCH1-211ENST00000509638 PRDM13Q9H4Q3 707 aa23.92■■□□□ 1.42
LIMCH1-211ENST00000509638 M0QYG6 137 aa23.91■■□□□ 1.42
LIMCH1-211ENST00000509638 CD3DP04234 171 aa23.91■■□□□ 1.42
LIMCH1-211ENST00000509638 FCGR2CP31995 323 aa23.91■■□□□ 1.42
LIMCH1-211ENST00000509638 REG1BP48304 166 aa23.91■■□□□ 1.42
LIMCH1-211ENST00000509638 TAS2R19P59542 299 aa23.91■■□□□ 1.42
LIMCH1-211ENST00000509638 DYRK1AQ13627 763 aa23.91■■□□□ 1.42
LIMCH1-211ENST00000509638 TRIM63Q969Q1 353 aa23.91■■□□□ 1.42
LIMCH1-211ENST00000509638 ST6GALNAC6Q969X2 333 aa23.91■■□□□ 1.42
LIMCH1-211ENST00000509638 OR2D2Q9H210 308 aa23.91■■□□□ 1.42
LIMCH1-211ENST00000509638 RNF150Q9ULK6 438 aa23.91■■□□□ 1.42
LIMCH1-211ENST00000509638 OR2W1Q9Y3N9 320 aa23.91■■□□□ 1.42
LIMCH1-211ENST00000509638 TUSC2O75896 110 aa23.91■■□□□ 1.42
LIMCH1-211ENST00000509638 CSF1P09603 554 aa23.91■■□□□ 1.42
LIMCH1-211ENST00000509638 TBPP20226 339 aa23.91■■□□□ 1.42
LIMCH1-211ENST00000509638 ZNF45Q02386 682 aa23.91■■□□□ 1.42
LIMCH1-211ENST00000509638 TMEM229BQ8NBD8 167 aa23.91■■□□□ 1.42
LIMCH1-211ENST00000509638 THAP7Q9BT49 309 aaPredicted RBP23.91■■□□□ 1.42
LIMCH1-211ENST00000509638 MEGF9Q9H1U4 602 aa23.91■■□□□ 1.42
LIMCH1-211ENST00000509638 ZNF107Q9UII5 783 aaPredicted RBP23.91■■□□□ 1.42
LIMCH1-211ENST00000509638 RBM7Q9Y580 266 aaKnown RBP23.91■■□□□ 1.42
LIMCH1-211ENST00000509638 OOSP1A8MZH6 123 aa23.9■■□□□ 1.42
LIMCH1-211ENST00000509638 J3QRK9 145 aa23.9■■□□□ 1.42
LIMCH1-211ENST00000509638 AADACP22760 399 aa23.9■■□□□ 1.42
LIMCH1-211ENST00000509638 RNASE10Q5GAN6 216 aaKnown RBP23.9■■□□□ 1.42
LIMCH1-211ENST00000509638 Q6YL49 198 aa23.9■■□□□ 1.42
LIMCH1-211ENST00000509638 PIPOXQ9P0Z9 390 aa23.9■■□□□ 1.42
LIMCH1-211ENST00000509638 RAB29O14966 203 aa23.89■■□□□ 1.41
LIMCH1-211ENST00000509638 GPR12P47775 334 aa23.89■■□□□ 1.41
LIMCH1-211ENST00000509638 LRRC75BQ2VPJ9 315 aa23.89■■□□□ 1.41
LIMCH1-211ENST00000509638 VAX1Q5SQQ9 334 aa23.89■■□□□ 1.41
LIMCH1-211ENST00000509638 CCDC144NLQ6NUI1 221 aa23.89■■□□□ 1.41
LIMCH1-211ENST00000509638 FAM216AQ8WUB2 273 aa23.89■■□□□ 1.41
LIMCH1-211ENST00000509638 RTN4IP1Q8WWV3 396 aaPredicted RBP23.89■■□□□ 1.41
LIMCH1-211ENST00000509638 TINAGL1Q9GZM7 467 aaPredicted RBP23.89■■□□□ 1.41
LIMCH1-211ENST00000509638 TAS2R8Q9NYW2 309 aa23.89■■□□□ 1.41
LIMCH1-211ENST00000509638 A0A1W2PPI3 338 aa23.88■■□□□ 1.41
LIMCH1-211ENST00000509638 HOXA3O43365 443 aaPredicted RBP23.88■■□□□ 1.41
LIMCH1-211ENST00000509638 PPYP01298 95 aa23.88■■□□□ 1.41
LIMCH1-211ENST00000509638 ZNF816Q0VGE8 651 aaPredicted RBP23.88■■□□□ 1.41
LIMCH1-211ENST00000509638 RPL39P5Q59GN2 51 aa23.88■■□□□ 1.41
LIMCH1-211ENST00000509638 GDPD1Q8N9F7 314 aa23.88■■□□□ 1.41
LIMCH1-211ENST00000509638 ZNF221Q9UK13 617 aa23.88■■□□□ 1.41
LIMCH1-211ENST00000509638 IGKV1D-13A0A0B4J2D9 117 aa23.87■■□□□ 1.41
LIMCH1-211ENST00000509638 IGHV4-59P01825 116 aa23.87■■□□□ 1.41
LIMCH1-211ENST00000509638 CD74P04233 296 aa23.87■■□□□ 1.41
LIMCH1-211ENST00000509638 IGKV1-13P0DP09 117 aa23.87■■□□□ 1.41
LIMCH1-211ENST00000509638 LUMP51884 338 aaPredicted RBP23.87■■□□□ 1.41
LIMCH1-211ENST00000509638 ARHGDIBP52566 201 aa23.87■■□□□ 1.41
LIMCH1-211ENST00000509638 BAMBIQ13145 260 aa23.87■■□□□ 1.41
LIMCH1-211ENST00000509638 ZNF660Q6AZW8 331 aaPredicted RBP23.87■■□□□ 1.41
LIMCH1-211ENST00000509638 STEAP1BQ6NZ63 245 aa23.87■■□□□ 1.41
LIMCH1-211ENST00000509638 ZNF833PQ6ZTB9 187 aa23.87■■□□□ 1.41
LIMCH1-211ENST00000509638 TGIF2LXQ8IUE1 241 aa23.87■■□□□ 1.41
LIMCH1-211ENST00000509638 OR4D10Q8NGI6 311 aa23.87■■□□□ 1.41
LIMCH1-211ENST00000509638 SSMEM1Q8WWF3 244 aa23.87■■□□□ 1.41
LIMCH1-211ENST00000509638 SSX3Q99909 188 aa23.87■■□□□ 1.41
LIMCH1-211ENST00000509638 DNAJC9-AS1A6NH13 148 aa23.86■■□□□ 1.41
LIMCH1-211ENST00000509638 VGLL3A8MV65 326 aa23.86■■□□□ 1.41
LIMCH1-211ENST00000509638 GAPDHP04406 335 aaKnown RBP23.86■■□□□ 1.41
LIMCH1-211ENST00000509638 HILS1P60008 231 aa23.86■■□□□ 1.41
LIMCH1-211ENST00000509638 GIMAP1Q8WWP7 306 aa23.86■■□□□ 1.41
LIMCH1-211ENST00000509638 S100ZQ8WXG8 99 aa23.86■■□□□ 1.41
LIMCH1-211ENST00000509638 S1PR3Q99500 378 aa23.86■■□□□ 1.41
LIMCH1-211ENST00000509638 SDHCQ99643 169 aaPredicted RBP23.86■■□□□ 1.41
LIMCH1-211ENST00000509638 ZNF2Q9BSG1 426 aaPredicted RBP23.86■■□□□ 1.41
LIMCH1-211ENST00000509638 GHITMQ9H3K2 345 aa23.86■■□□□ 1.41
LIMCH1-211ENST00000509638 ESM1Q9NQ30 184 aa23.86■■□□□ 1.41
LIMCH1-211ENST00000509638 ANKRD20A5PA0PJZ0 165 aa23.86■■□□□ 1.41
LIMCH1-211ENST00000509638 H3BUX3 64 aa23.86■■□□□ 1.41
LIMCH1-211ENST00000509638 TIMM23O14925 209 aa23.86■■□□□ 1.41
LIMCH1-211ENST00000509638 TXNL1O43396 289 aa23.86■■□□□ 1.41
LIMCH1-211ENST00000509638 TCF21O43680 179 aa23.86■■□□□ 1.41
LIMCH1-211ENST00000509638 RAB3DO95716 219 aa23.86■■□□□ 1.41
LIMCH1-211ENST00000509638 IER3P46695 156 aa23.86■■□□□ 1.41
LIMCH1-211ENST00000509638 FXYD4P59646 89 aa23.86■■□□□ 1.41
LIMCH1-211ENST00000509638 HERV-K104P61576 105 aa23.86■■□□□ 1.41
LIMCH1-211ENST00000509638 TSPAN5P62079 268 aa23.86■■□□□ 1.41
LIMCH1-211ENST00000509638 OR8H3Q8N146 312 aa23.86■■□□□ 1.41
LIMCH1-211ENST00000509638 DUX5Q96PT3 197 aa23.86■■□□□ 1.41
LIMCH1-211ENST00000509638 ZNF251Q9BRH9 671 aa23.86■■□□□ 1.41
LIMCH1-211ENST00000509638 IGHV1-3A0A0C4DH29 117 aa23.85■■□□□ 1.41
LIMCH1-211ENST00000509638 AANATQ16613 207 aa23.85■■□□□ 1.41
LIMCH1-211ENST00000509638 FAM71F2Q6NXP2 309 aa23.85■■□□□ 1.41
LIMCH1-211ENST00000509638 FAAP20Q6NZ36 180 aa23.85■■□□□ 1.41
LIMCH1-211ENST00000509638 DHRS11Q6UWP2 260 aa23.85■■□□□ 1.41
LIMCH1-211ENST00000509638 TMEM17Q86X19 198 aa23.85■■□□□ 1.41
LIMCH1-211ENST00000509638 MRPL20Q9BYC9 149 aaKnown RBP23.85■■□□□ 1.41
LIMCH1-211ENST00000509638 ABCB10Q9NRK6 738 aa23.85■■□□□ 1.41
LIMCH1-211ENST00000509638 TNFRSF19Q9NS68 423 aa23.85■■□□□ 1.41
LIMCH1-211ENST00000509638 IFNA2P01563 188 aa23.84■■□□□ 1.41
LIMCH1-211ENST00000509638 IFNA6P05013 189 aa23.84■■□□□ 1.41
LIMCH1-211ENST00000509638 AKAIN1P0CW23 69 aa23.84■■□□□ 1.41
LIMCH1-211ENST00000509638 RAB13P51153 203 aa23.84■■□□□ 1.41
LIMCH1-211ENST00000509638 DRAM1Q8N682 238 aa23.84■■□□□ 1.41
LIMCH1-211ENST00000509638 ZNF436-AS1Q8NC38 126 aaPredicted RBP23.84■■□□□ 1.41
LIMCH1-211ENST00000509638 OR4C16Q8NGL9 310 aa23.84■■□□□ 1.41
LIMCH1-211ENST00000509638 OR6F1Q8NGZ6 308 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms