RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 IGHV1-2P23083 117 aa13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 NDUFA6P56556 154 aa13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 TNFRSF9Q07011 255 aa13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 SLC38A11Q08AI6 406 aa13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 PNRC1Q12796 327 aaPredicted RBP13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 PSG7Q13046 419 aa13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 GABRA6Q16445 453 aa13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 ATP1A1-AS1Q5TC04 95 aa13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 FAM53AQ6NSI3 398 aaPredicted RBP13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 TAF15Q92804 592 aaKnown RBP eCLIP13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 P2RX4Q99571 388 aa13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 TOLLIPQ9H0E2 274 aa13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 UBE2L5PA0A1B0GUS4 154 aa13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 MAP1LC3B2A6NCE7 125 aa13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 C1QTNF9BB2RNN3 333 aa13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 HIST1H2BKO60814 126 aa13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 HIST1H2BJP06899 126 aa13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 HIST1H2BOP23527 126 aa13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 S100PP25815 95 aa13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 HIST1H2BBP33778 126 aa13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 ELLP55199 621 aaPredicted RBP13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 HIST1H2BDP58876 126 aa13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 HIST1H2BCP62807 126 aa13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 EIF4EBP1Q13541 118 aaPredicted RBP13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 HIST2H2BEQ16778 126 aa13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 MRGPRGQ86SM5 289 aa13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 ZNF645Q8N7E2 425 aa13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 HIST1H2BHQ93079 126 aa13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 PINX1Q96BK5 328 aaKnown RBP13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 GMPPAQ96IJ6 420 aaPredicted RBP13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 HIST1H2BNQ99877 126 aa13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 HIST1H2BMQ99879 126 aa13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 MAP1LC3BQ9GZQ8 125 aa13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 SDF2L1Q9HCN8 221 aa13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 TMEM242Q9NWH2 141 aa13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 HSPB7Q9UBY9 170 aa13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 VAX2Q9UIW0 290 aa13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 C12orf77C9JDV5 145 aa13.55□□□□□ -0.24
SEMA4D-220ENST00000492386 OR3A1P47881 315 aa13.55□□□□□ -0.24
SEMA4D-220ENST00000492386 RND2P52198 227 aa13.55□□□□□ -0.24
SEMA4D-220ENST00000492386 UBE2NP61088 152 aaKnown RBP13.55□□□□□ -0.24
SEMA4D-220ENST00000492386 RPL30P62888 115 aaKnown RBP13.55□□□□□ -0.24
SEMA4D-220ENST00000492386 GGACTQ9BVM4 153 aa13.55□□□□□ -0.24
SEMA4D-220ENST00000492386 ZDHHC11Q9H8X9 412 aa13.55□□□□□ -0.24
SEMA4D-220ENST00000492386 USF3Q68DE3 2245 aa13.55□□□□□ -0.24
SEMA4D-220ENST00000492386 TMEM30CPA0ZSE6 113 aa13.54□□□□□ -0.24
SEMA4D-220ENST00000492386 TNFSF15O95150 251 aa13.54□□□□□ -0.24
SEMA4D-220ENST00000492386 CLDN1O95832 211 aa13.54□□□□□ -0.24
SEMA4D-220ENST00000492386 IGKV1D-33P01593 117 aa13.54□□□□□ -0.24
SEMA4D-220ENST00000492386 IGKV1-33P01594 117 aa13.54□□□□□ -0.24
SEMA4D-220ENST00000492386 MPV17P39210 176 aa13.54□□□□□ -0.24
SEMA4D-220ENST00000492386 OR8G2PQ6IF36 304 aa13.54□□□□□ -0.24
SEMA4D-220ENST00000492386 ZBTB34Q8NCN2 500 aa13.54□□□□□ -0.24
SEMA4D-220ENST00000492386 EDARADDQ8WWZ3 215 aa13.54□□□□□ -0.24
SEMA4D-220ENST00000492386 OR2D2Q9H210 308 aa13.54□□□□□ -0.24
SEMA4D-220ENST00000492386 KCNIP1Q9NZI2 227 aa13.54□□□□□ -0.24
SEMA4D-220ENST00000492386 NCOR1O75376 2440 aa13.54□□□□□ -0.24
SEMA4D-220ENST00000492386 TMEM210A6NLX4 147 aa13.54□□□□□ -0.24
SEMA4D-220ENST00000492386 CEBPZOSA8MTT3 80 aa13.54□□□□□ -0.24
SEMA4D-220ENST00000492386 LYZL6O75951 148 aa13.54□□□□□ -0.24
SEMA4D-220ENST00000492386 CYB5R3P00387 301 aaPredicted RBP13.54□□□□□ -0.24
SEMA4D-220ENST00000492386 IGHV2-70P01814 119 aa13.54□□□□□ -0.24
SEMA4D-220ENST00000492386 TRGC2P03986 189 aa13.54□□□□□ -0.24
SEMA4D-220ENST00000492386 G6PCP35575 357 aa13.54□□□□□ -0.24
SEMA4D-220ENST00000492386 PMS2P11Q13670 270 aa13.54□□□□□ -0.24
SEMA4D-220ENST00000492386 SPNS3Q6ZMD2 512 aa13.54□□□□□ -0.24
SEMA4D-220ENST00000492386 BEND4Q6ZU67 534 aa13.54□□□□□ -0.24
SEMA4D-220ENST00000492386 CENPVQ7Z7K6 275 aaPredicted RBP13.54□□□□□ -0.24
SEMA4D-220ENST00000492386 C11orf53Q8IXP5 236 aa13.54□□□□□ -0.24
SEMA4D-220ENST00000492386 RPP25LQ8N5L8 163 aaKnown RBP13.54□□□□□ -0.24
SEMA4D-220ENST00000492386 OR52L2PQ8NGH6 319 aa13.54□□□□□ -0.24
SEMA4D-220ENST00000492386 OR13D1Q8NGV5 346 aa13.54□□□□□ -0.24
SEMA4D-220ENST00000492386 GALMQ96C23 342 aa13.54□□□□□ -0.24
SEMA4D-220ENST00000492386 TINAGQ9UJW2 476 aa13.54□□□□□ -0.24
SEMA4D-220ENST00000492386 TIMM9Q9Y5J7 89 aa13.54□□□□□ -0.24
SEMA4D-220ENST00000492386 CDX4O14627 284 aaPredicted RBP13.53□□□□□ -0.24
SEMA4D-220ENST00000492386 WNT9BO14905 357 aa13.53□□□□□ -0.24
SEMA4D-220ENST00000492386 KRASP01116 189 aa13.53□□□□□ -0.24
SEMA4D-220ENST00000492386 PLA2G5P39877 138 aa13.53□□□□□ -0.24
SEMA4D-220ENST00000492386 BRWD1-AS2P59051 145 aa13.53□□□□□ -0.24
SEMA4D-220ENST00000492386 HOXA4Q00056 320 aaPredicted RBP13.53□□□□□ -0.24
SEMA4D-220ENST00000492386 OR2B11Q5JQS5 317 aa13.53□□□□□ -0.24
SEMA4D-220ENST00000492386 CLDN34H7C241 214 aa13.53□□□□□ -0.24
SEMA4D-220ENST00000492386 MLNRO43193 412 aa13.53□□□□□ -0.24
SEMA4D-220ENST00000492386 TGFBR3Q03167 851 aa13.53□□□□□ -0.24
SEMA4D-220ENST00000492386 WDR25Q64LD2 544 aaPredicted RBP13.53□□□□□ -0.24
SEMA4D-220ENST00000492386 DHRS13Q6UX07 377 aa13.53□□□□□ -0.24
SEMA4D-220ENST00000492386 ZNF826PQ6ZT77 177 aa13.53□□□□□ -0.24
SEMA4D-220ENST00000492386 KLF14Q8TD94 323 aaPredicted RBP13.53□□□□□ -0.24
SEMA4D-220ENST00000492386 FAM210BQ96KR6 192 aa13.53□□□□□ -0.24
SEMA4D-220ENST00000492386 SSX3Q99909 188 aa13.53□□□□□ -0.24
SEMA4D-220ENST00000492386 LRRC30A6NM36 301 aa13.52□□□□□ -0.24
SEMA4D-220ENST00000492386 ZNF737O75373 536 aa13.52□□□□□ -0.24
SEMA4D-220ENST00000492386 HBZP02008 142 aa13.52□□□□□ -0.24
SEMA4D-220ENST00000492386 CD55P08174 381 aa13.52□□□□□ -0.24
SEMA4D-220ENST00000492386 ARG2P78540 354 aa13.52□□□□□ -0.24
SEMA4D-220ENST00000492386 PMP22Q01453 160 aa13.52□□□□□ -0.24
SEMA4D-220ENST00000492386 AESQ08117 197 aa13.52□□□□□ -0.24
SEMA4D-220ENST00000492386 ZNF816Q0VGE8 651 aaPredicted RBP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms