RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 CATR1Q13166 79 aa16.7■□□□□ 0.26
ATP1A1-208ENST00000488733 NMSQ5H8A3 153 aa16.7■□□□□ 0.26
ATP1A1-208ENST00000488733 SLC7A5P1Q8MH63 180 aa16.7■□□□□ 0.26
ATP1A1-208ENST00000488733 ABHD14BQ96IU4 210 aa16.7■□□□□ 0.26
ATP1A1-208ENST00000488733 ARPC5LQ9BPX5 153 aa16.7■□□□□ 0.26
ATP1A1-208ENST00000488733 LINC00574Q9H8X3 128 aa16.7■□□□□ 0.26
ATP1A1-208ENST00000488733 A0A1B0GW55 424 aa16.7■□□□□ 0.26
ATP1A1-208ENST00000488733 hADV38S2A0JD32 116 aa16.7■□□□□ 0.26
ATP1A1-208ENST00000488733 ITGB1BP1O14713 200 aa16.7■□□□□ 0.26
ATP1A1-208ENST00000488733 TNFRSF13BO14836 293 aaPredicted RBP16.7■□□□□ 0.26
ATP1A1-208ENST00000488733 SCGB1D2O95969 90 aa16.7■□□□□ 0.26
ATP1A1-208ENST00000488733 DUX4L2P0CJ85 424 aa16.7■□□□□ 0.26
ATP1A1-208ENST00000488733 DUX4L3P0CJ86 424 aa16.7■□□□□ 0.26
ATP1A1-208ENST00000488733 DUX4L4P0CJ87 422 aa16.7■□□□□ 0.26
ATP1A1-208ENST00000488733 DUX4L5P0CJ88 424 aa16.7■□□□□ 0.26
ATP1A1-208ENST00000488733 DUX4L6P0CJ89 424 aa16.7■□□□□ 0.26
ATP1A1-208ENST00000488733 DUX4L7P0CJ90 424 aa16.7■□□□□ 0.26
ATP1A1-208ENST00000488733 SLC25A6P12236 298 aa16.7■□□□□ 0.26
ATP1A1-208ENST00000488733 LOXL3P58215 753 aa16.7■□□□□ 0.26
ATP1A1-208ENST00000488733 DUX4L9Q6RFH8 374 aaPredicted RBP16.7■□□□□ 0.26
ATP1A1-208ENST00000488733 ZNF66Q6ZN08 573 aa16.7■□□□□ 0.26
ATP1A1-208ENST00000488733 FOXRED2Q8IWF2 684 aa16.7■□□□□ 0.26
ATP1A1-208ENST00000488733 OR4D5Q8NGN0 318 aa16.7■□□□□ 0.26
ATP1A1-208ENST00000488733 FAM212BQ9NTI7 297 aaPredicted RBP16.7■□□□□ 0.26
ATP1A1-208ENST00000488733 DUX4Q9UBX2 424 aa16.7■□□□□ 0.26
ATP1A1-208ENST00000488733 SLC25A10Q9UBX3 287 aaPredicted RBP16.7■□□□□ 0.26
ATP1A1-208ENST00000488733 LSM5Q9Y4Y9 91 aaKnown RBP16.7■□□□□ 0.26
ATP1A1-208ENST00000488733 TANC2Q9HCD6 1990 aa16.69■□□□□ 0.26
ATP1A1-208ENST00000488733 E5RGE8 158 aa16.69■□□□□ 0.26
ATP1A1-208ENST00000488733 K7EPK0 472 aa16.69■□□□□ 0.26
ATP1A1-208ENST00000488733 FSTL3O95633 263 aa16.69■□□□□ 0.26
ATP1A1-208ENST00000488733 EIF4EBP1Q13541 118 aaPredicted RBP16.69■□□□□ 0.26
ATP1A1-208ENST00000488733 C17orf58Q2M2W7 97 aa16.69■□□□□ 0.26
ATP1A1-208ENST00000488733 OR8H3Q8N146 312 aa16.69■□□□□ 0.26
ATP1A1-208ENST00000488733 FAM71E2Q8N5Q1 922 aa16.69■□□□□ 0.26
ATP1A1-208ENST00000488733 OR52M1Q8NGK5 317 aa16.69■□□□□ 0.26
ATP1A1-208ENST00000488733 LSM10Q969L4 123 aaKnown RBP16.69■□□□□ 0.26
ATP1A1-208ENST00000488733 RRNAD1Q96FB5 475 aaKnown RBP16.69■□□□□ 0.26
ATP1A1-208ENST00000488733 AGMATQ9BSE5 352 aa16.69■□□□□ 0.26
ATP1A1-208ENST00000488733 PLEKHA2Q9HB19 425 aa16.69■□□□□ 0.26
ATP1A1-208ENST00000488733 TAS2R3Q9NYW6 316 aa16.69■□□□□ 0.26
ATP1A1-208ENST00000488733 KAAG1Q9UBP8 84 aa16.69■□□□□ 0.26
ATP1A1-208ENST00000488733 PSG11Q9UQ72 335 aa16.69■□□□□ 0.26
ATP1A1-208ENST00000488733 NSG2Q9Y328 171 aa16.69■□□□□ 0.26
ATP1A1-208ENST00000488733 KLF2Q9Y5W3 355 aaPredicted RBP16.69■□□□□ 0.26
ATP1A1-208ENST00000488733 RAI1Q7Z5J4 1906 aaPredicted RBP16.69■□□□□ 0.26
ATP1A1-208ENST00000488733 SPTAN1Q13813 2472 aaKnown RBP16.69■□□□□ 0.26
ATP1A1-208ENST00000488733 MEX3AA1L020 520 aaKnown RBP16.68■□□□□ 0.26
ATP1A1-208ENST00000488733 ADAM20O43506 726 aa16.68■□□□□ 0.26
ATP1A1-208ENST00000488733 NDUFB3O43676 98 aa16.68■□□□□ 0.26
ATP1A1-208ENST00000488733 ZNF16P17020 682 aaPredicted RBP16.68■□□□□ 0.26
ATP1A1-208ENST00000488733 NDUFB7P17568 137 aa16.68■□□□□ 0.26
ATP1A1-208ENST00000488733 RAB14P61106 215 aa16.68■□□□□ 0.26
ATP1A1-208ENST00000488733 LTC4SQ16873 150 aa16.68■□□□□ 0.26
ATP1A1-208ENST00000488733 FAM53AQ6NSI3 398 aaPredicted RBP16.68■□□□□ 0.26
ATP1A1-208ENST00000488733 HSD17B10Q99714 261 aaKnown RBP16.68■□□□□ 0.26
ATP1A1-208ENST00000488733 CBLN4Q9NTU7 201 aa16.68■□□□□ 0.26
ATP1A1-208ENST00000488733 LPAR3Q9UBY5 353 aa16.68■□□□□ 0.26
ATP1A1-208ENST00000488733 POMT1Q9Y6A1 747 aa16.68■□□□□ 0.26
ATP1A1-208ENST00000488733 LINC00312Q9Y6C7 94 aa16.68■□□□□ 0.26
ATP1A1-208ENST00000488733 RAB7AP51149 207 aa16.67■□□□□ 0.26
ATP1A1-208ENST00000488733 LRRC10Q5BKY1 277 aa16.67■□□□□ 0.26
ATP1A1-208ENST00000488733 RAB1BQ9H0U4 201 aa16.67■□□□□ 0.26
ATP1A1-208ENST00000488733 GFOD1Q9NXC2 390 aa16.67■□□□□ 0.26
ATP1A1-208ENST00000488733 ARFGEF3Q5TH69 2177 aa16.67■□□□□ 0.26
ATP1A1-208ENST00000488733 A0A1B0GU03 582 aa16.67■□□□□ 0.26
ATP1A1-208ENST00000488733 NKX2-1P43699 371 aaPredicted RBP16.67■□□□□ 0.26
ATP1A1-208ENST00000488733 SRSF1Q07955 248 aaKnown RBP eCLIP16.67■□□□□ 0.26
ATP1A1-208ENST00000488733 ZNF585BQ52M93 769 aa16.67■□□□□ 0.26
ATP1A1-208ENST00000488733 OR10A7Q8NGE5 316 aa16.67■□□□□ 0.26
ATP1A1-208ENST00000488733 SCARB1Q8WTV0 552 aa16.67■□□□□ 0.26
ATP1A1-208ENST00000488733 ZNF471Q9BX82 626 aaPredicted RBP16.67■□□□□ 0.26
ATP1A1-208ENST00000488733 GSX2Q9BZM3 304 aa16.67■□□□□ 0.26
ATP1A1-208ENST00000488733 SDHAF2Q9NX18 166 aa16.67■□□□□ 0.26
ATP1A1-208ENST00000488733 IDI2-AS1Q9NZ38 188 aa16.67■□□□□ 0.26
ATP1A1-208ENST00000488733 GAB2Q9UQC2 676 aa16.67■□□□□ 0.26
ATP1A1-208ENST00000488733 F5H0A9 414 aaPredicted RBP16.66■□□□□ 0.26
ATP1A1-208ENST00000488733 TAAR5O14804 337 aa16.66■□□□□ 0.26
ATP1A1-208ENST00000488733 ST8SIA5O15466 376 aa16.66■□□□□ 0.26
ATP1A1-208ENST00000488733 ATG12O94817 140 aa16.66■□□□□ 0.26
ATP1A1-208ENST00000488733 CLDN1O95832 211 aa16.66■□□□□ 0.26
ATP1A1-208ENST00000488733 GPR12P47775 334 aa16.66■□□□□ 0.26
ATP1A1-208ENST00000488733 CLLU1Q5K131 121 aa16.66■□□□□ 0.26
ATP1A1-208ENST00000488733 RNASE11Q8TAA1 199 aaKnown RBP16.66■□□□□ 0.26
ATP1A1-208ENST00000488733 ST8SIA2Q92186 375 aa16.66■□□□□ 0.26
ATP1A1-208ENST00000488733 GAL3ST2Q9H3Q3 398 aa16.66■□□□□ 0.26
ATP1A1-208ENST00000488733 MSGN1A6NI15 193 aa16.65■□□□□ 0.26
ATP1A1-208ENST00000488733 A6NNC1 897 aa16.65■□□□□ 0.26
ATP1A1-208ENST00000488733 KCNAB3O43448 404 aa16.65■□□□□ 0.26
ATP1A1-208ENST00000488733 SPDEFO95238 335 aa16.65■□□□□ 0.26
ATP1A1-208ENST00000488733 HKR1P10072 659 aa16.65■□□□□ 0.26
ATP1A1-208ENST00000488733 RPL12P30050 165 aaKnown RBP16.65■□□□□ 0.26
ATP1A1-208ENST00000488733 GPR157Q5UAW9 335 aa16.65■□□□□ 0.26
ATP1A1-208ENST00000488733 TCF23Q7RTU1 214 aa16.65■□□□□ 0.26
ATP1A1-208ENST00000488733 C5orf30Q96GV9 206 aa16.65■□□□□ 0.26
ATP1A1-208ENST00000488733 ZC4H2Q9NQZ6 224 aa16.65■□□□□ 0.26
ATP1A1-208ENST00000488733 PVALBP20472 110 aaPredicted RBP16.65■□□□□ 0.26
ATP1A1-208ENST00000488733 OMGP23515 440 aa16.65■□□□□ 0.26
ATP1A1-208ENST00000488733 LPAR6P43657 344 aa16.65■□□□□ 0.26
ATP1A1-208ENST00000488733 P2RY1P47900 373 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms