RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 AIF1LQ9BQI0 150 aa2.77□□□□□ -1.97
ECHDC1-217ENST00000488087 MS4A8Q9BY19 250 aa2.77□□□□□ -1.97
ECHDC1-217ENST00000488087 NMES1Q9C002 83 aa2.77□□□□□ -1.97
ECHDC1-217ENST00000488087 OR2J1Q9GZK6 312 aa2.77□□□□□ -1.97
ECHDC1-217ENST00000488087 POLR2J3Q9H1A7 115 aaKnown RBP2.77□□□□□ -1.97
ECHDC1-217ENST00000488087 NXF5Q9H1B4 397 aaKnown RBP2.77□□□□□ -1.97
ECHDC1-217ENST00000488087 SLC35B3Q9H1N7 401 aa2.77□□□□□ -1.97
ECHDC1-217ENST00000488087 ARV1Q9H2C2 271 aa2.77□□□□□ -1.97
ECHDC1-217ENST00000488087 RDH14Q9HBH5 336 aa2.77□□□□□ -1.97
ECHDC1-217ENST00000488087 WFDC1Q9HC57 220 aa2.77□□□□□ -1.97
ECHDC1-217ENST00000488087 SLC17A5Q9NRA2 495 aa2.77□□□□□ -1.97
ECHDC1-217ENST00000488087 LYRM2Q9NU23 88 aaPredicted RBP2.77□□□□□ -1.97
ECHDC1-217ENST00000488087 KLHL28Q9NXS3 571 aa2.77□□□□□ -1.97
ECHDC1-217ENST00000488087 SLC2A8Q9NY64 477 aa2.77□□□□□ -1.97
ECHDC1-217ENST00000488087 MRPL27Q9P0M9 148 aaKnown RBP2.77□□□□□ -1.97
ECHDC1-217ENST00000488087 ZNF282Q9UDV7 671 aaPredicted RBP2.77□□□□□ -1.97
ECHDC1-217ENST00000488087 SHPKQ9UHJ6 478 aa2.77□□□□□ -1.97
ECHDC1-217ENST00000488087 SLC7A11Q9UPY5 501 aa2.77□□□□□ -1.97
ECHDC1-217ENST00000488087 PRG3Q9Y2Y8 225 aaPredicted RBP2.77□□□□□ -1.97
ECHDC1-217ENST00000488087 ZNF337Q9Y3M9 751 aa2.77□□□□□ -1.97
ECHDC1-217ENST00000488087 PPIAL4AQ9Y536 164 aa2.77□□□□□ -1.97
ECHDC1-217ENST00000488087 ATRXP46100 2492 aa2.77□□□□□ -1.97
ECHDC1-217ENST00000488087 ANKRD36A6QL64 1941 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 A0A1W2PPV9 198 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 EPOPA6NHQ4 379 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 ZFP92A6NM28 416 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 C9JQL5 133 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 F6UZH7 168 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 K7ENP7 123 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 K7ERU9 68 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 LATO43561 262 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 TBL1XO60907 577 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 SCGNO76038 276 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 GLSO94925 669 aaPredicted RBP2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 LYPD3O95274 346 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 CST4P01036 141 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 SEC11BP0C7V7 166 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 TRGC1P0CF51 173 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 AKAIN1P0CW23 69 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 SMIM10L2AP0DMW4 78 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 SMIM10L2BP0DMW5 78 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 OR12D1P0DN82 309 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 LIPCP11150 499 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 FABP4P15090 132 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 NTSP30990 170 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 CEACAM3P40198 252 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 NAA10P41227 235 aaPredicted RBP2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 KIR2DS2P43631 304 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 P2RY1P47900 373 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 RAB7AP51149 207 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 P2RX1P51575 399 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 FGF8P55075 233 aaPredicted RBP2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 TMEM33P57088 247 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 SLC10A7Q0GE19 358 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 ST3GAL3Q11203 375 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 GINS1Q14691 196 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 EBPQ15125 230 aaKnown RBP2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 NSDHLQ15738 373 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 PGGHGQ32M88 737 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 C6orf226Q5I0X4 101 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 CST9Q5W186 159 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 OR2T2Q6IF00 324 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 TRIM40Q6P9F5 258 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 PRSS54Q6PEW0 395 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 SLC35E3Q7Z769 313 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 GKN2Q86XP6 184 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 LINC01561Q8N1V8 128 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 RNF175Q8N4F7 328 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 KRTCAP2Q8N6L1 136 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 COX18Q8N8Q8 333 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 ZDHHC22Q8N966 263 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 TMEM229BQ8NBD8 167 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 PLPP5Q8NEB5 264 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 OR4K14Q8NGD5 310 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 OR4D6Q8NGJ1 314 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 OR1P1Q8NH06 330 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 SFXN5Q8TD22 340 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 CD200R1Q8TD46 325 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 RPS4Y2Q8TD47 263 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 CD300LFQ8TDQ1 290 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 CXorf40AQ8TE69 158 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 CASTOR1Q8WTX7 329 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 PPP1R1CQ8WVI7 109 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 DNAJB3Q8WWF6 145 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 C11orf40Q8WZ69 217 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 CDS1Q92903 461 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 IMP4Q96G21 291 aaKnown RBP2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 PGLYRP3Q96LB9 341 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 TMEM56Q96MV1 263 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 ZFP3Q96NJ6 502 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 TECTBQ96PL2 329 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 TP53RKQ96S44 253 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 FAAP24Q9BTP7 215 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 TBL1XR1Q9BZK7 514 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 RBKSQ9H477 322 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 ZNF430Q9H8G1 570 aaPredicted RBP2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 ISG20L2Q9H9L3 353 aaKnown RBP2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 PDFQ9HBH1 243 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 BEX1Q9HBH7 125 aa2.76□□□□□ -1.97
ECHDC1-217ENST00000488087 KCNJ16Q9NPI9 418 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms