RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 ARFRP1Q13795 201 aa18■□□□□ 0.47
TRAF4-211ENST00000478021 TCTEX1D4Q5JR98 221 aa18■□□□□ 0.47
TRAF4-211ENST00000478021 SLC35E3Q7Z769 313 aa18■□□□□ 0.47
TRAF4-211ENST00000478021 S1PR3Q99500 378 aa18■□□□□ 0.47
TRAF4-211ENST00000478021 C11orf54Q9H0W9 315 aaPredicted RBP18■□□□□ 0.47
TRAF4-211ENST00000478021 PLSCR3Q9NRY6 295 aa18■□□□□ 0.47
TRAF4-211ENST00000478021 PIPOXQ9P0Z9 390 aa18■□□□□ 0.47
TRAF4-211ENST00000478021 VWFP04275 2813 aa18■□□□□ 0.47
TRAF4-211ENST00000478021 LINC01548A6NM66 108 aa17.99■□□□□ 0.47
TRAF4-211ENST00000478021 SERPINE3A8MV23 424 aa17.99■□□□□ 0.47
TRAF4-211ENST00000478021 CD83Q01151 205 aa17.99■□□□□ 0.47
TRAF4-211ENST00000478021 IDNKQ5T6J7 187 aa17.99■□□□□ 0.47
TRAF4-211ENST00000478021 VCX3AQ9NNX9 186 aa17.99■□□□□ 0.47
TRAF4-211ENST00000478021 LIN7CQ9NUP9 197 aaKnown RBP17.99■□□□□ 0.47
TRAF4-211ENST00000478021 RNF150Q9ULK6 438 aa17.99■□□□□ 0.47
TRAF4-211ENST00000478021 PSMB11A5LHX3 300 aa17.98■□□□□ 0.47
TRAF4-211ENST00000478021 RAB29O14966 203 aa17.98■□□□□ 0.47
TRAF4-211ENST00000478021 FABP7O15540 132 aa17.98■□□□□ 0.47
TRAF4-211ENST00000478021 IGHG2P01859 326 aa17.98■□□□□ 0.47
TRAF4-211ENST00000478021 GSTT2P0CG29 244 aa17.98■□□□□ 0.47
TRAF4-211ENST00000478021 GSTT2BP0CG30 244 aa17.98■□□□□ 0.47
TRAF4-211ENST00000478021 IGSF11Q5DX21 431 aa17.98■□□□□ 0.47
TRAF4-211ENST00000478021 GLDNQ6ZMI3 551 aaPredicted RBP17.98■□□□□ 0.47
TRAF4-211ENST00000478021 ZNF329Q86UD4 541 aa17.98■□□□□ 0.47
TRAF4-211ENST00000478021 OR4X2Q8NGF9 303 aa17.98■□□□□ 0.47
TRAF4-211ENST00000478021 OR4A4PQ8NGN8 299 aa17.98■□□□□ 0.47
TRAF4-211ENST00000478021 EDARADDQ8WWZ3 215 aa17.98■□□□□ 0.47
TRAF4-211ENST00000478021 R3HDM4Q96D70 268 aa17.98■□□□□ 0.47
TRAF4-211ENST00000478021 YIPF6Q96EC8 236 aa17.98■□□□□ 0.47
TRAF4-211ENST00000478021 RASL11BQ9BPW5 248 aa17.98■□□□□ 0.47
TRAF4-211ENST00000478021 ZNF251Q9BRH9 671 aa17.98■□□□□ 0.47
TRAF4-211ENST00000478021 ABCG5Q9H222 651 aa17.98■□□□□ 0.47
TRAF4-211ENST00000478021 TCRBV4S1A1TA0A5B7 111 aa17.97■□□□□ 0.47
TRAF4-211ENST00000478021 ITGB1BP1O14713 200 aa17.97■□□□□ 0.47
TRAF4-211ENST00000478021 BET1O15155 118 aa17.97■□□□□ 0.47
TRAF4-211ENST00000478021 CNTFRP26992 372 aa17.97■□□□□ 0.47
TRAF4-211ENST00000478021 TALDO1P37837 337 aa17.97■□□□□ 0.47
TRAF4-211ENST00000478021 GPR12P47775 334 aa17.97■□□□□ 0.47
TRAF4-211ENST00000478021 LSM3P62310 102 aaKnown RBP17.97■□□□□ 0.47
TRAF4-211ENST00000478021 MMDQ15546 238 aa17.97■□□□□ 0.47
TRAF4-211ENST00000478021 CDNFQ49AH0 187 aa17.97■□□□□ 0.47
TRAF4-211ENST00000478021 KHDC1LQ5JSQ8 128 aa17.97■□□□□ 0.47
TRAF4-211ENST00000478021 FAM71F2Q6NXP2 309 aa17.97■□□□□ 0.47
TRAF4-211ENST00000478021 OR5H6Q8NGV6 325 aa17.97■□□□□ 0.47
TRAF4-211ENST00000478021 RITA1Q96K30 269 aa17.97■□□□□ 0.47
TRAF4-211ENST00000478021 AGMATQ9BSE5 352 aa17.97■□□□□ 0.47
TRAF4-211ENST00000478021 RDH8Q9NYR8 311 aa17.97■□□□□ 0.47
TRAF4-211ENST00000478021 AIREO43918 545 aa17.96■□□□□ 0.47
TRAF4-211ENST00000478021 ACTBP60709 375 aa17.96■□□□□ 0.47
TRAF4-211ENST00000478021 KIR2DS1Q14954 304 aa17.96■□□□□ 0.47
TRAF4-211ENST00000478021 FAM131AQ6UXB0 335 aa17.96■□□□□ 0.47
TRAF4-211ENST00000478021 FOXRED2Q8IWF2 684 aa17.96■□□□□ 0.47
TRAF4-211ENST00000478021 FAM71E2Q8N5Q1 922 aa17.96■□□□□ 0.47
TRAF4-211ENST00000478021 OR8H1Q8NGG4 311 aa17.96■□□□□ 0.47
TRAF4-211ENST00000478021 CHPT1Q8WUD6 406 aa17.96■□□□□ 0.47
TRAF4-211ENST00000478021 HSPB9Q9BQS6 159 aa17.96■□□□□ 0.47
TRAF4-211ENST00000478021 CABLES2Q9BTV7 478 aa17.96■□□□□ 0.47
TRAF4-211ENST00000478021 RHBDL2Q9NX52 303 aa17.96■□□□□ 0.47
TRAF4-211ENST00000478021 OPN1MWP04001 364 aa17.95■□□□□ 0.46
TRAF4-211ENST00000478021 CT45A6P0DMU7 189 aa17.95■□□□□ 0.46
TRAF4-211ENST00000478021 CT45A5P0DMU8 189 aa17.95■□□□□ 0.46
TRAF4-211ENST00000478021 CT45A7P0DMV0 189 aa17.95■□□□□ 0.46
TRAF4-211ENST00000478021 OPN1MW2P0DN77 364 aa17.95■□□□□ 0.46
TRAF4-211ENST00000478021 OPN1MW3P0DN78 364 aa17.95■□□□□ 0.46
TRAF4-211ENST00000478021 TIMM50Q3ZCQ8 353 aa17.95■□□□□ 0.46
TRAF4-211ENST00000478021 IGKV1D-8A0A087WSZ0 117 aa17.94■□□□□ 0.46
TRAF4-211ENST00000478021 ARL6IP1Q15041 203 aa17.94■□□□□ 0.46
TRAF4-211ENST00000478021 C1QL4Q86Z23 238 aa17.94■□□□□ 0.46
TRAF4-211ENST00000478021 STPG2Q8N412 459 aa17.94■□□□□ 0.46
TRAF4-211ENST00000478021 OR4F17Q8NGA8 305 aa17.94■□□□□ 0.46
TRAF4-211ENST00000478021 NUDCD2Q8WVJ2 157 aa17.94■□□□□ 0.46
TRAF4-211ENST00000478021 SLC25A38Q96DW6 304 aa17.94■□□□□ 0.46
TRAF4-211ENST00000478021 OR4F4Q96R69 305 aa17.94■□□□□ 0.46
TRAF4-211ENST00000478021 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.94■□□□□ 0.46
TRAF4-211ENST00000478021 ZNF221Q9UK13 617 aa17.94■□□□□ 0.46
TRAF4-211ENST00000478021 TSSC4Q9Y5U2 329 aaPredicted RBP17.94■□□□□ 0.46
TRAF4-211ENST00000478021 TMEM235A6NFC5 223 aa17.93■□□□□ 0.46
TRAF4-211ENST00000478021 WIPF1O43516 503 aa17.93■□□□□ 0.46
TRAF4-211ENST00000478021 PROP1O75360 226 aa17.93■□□□□ 0.46
TRAF4-211ENST00000478021 SERPINB10P48595 397 aa17.93■□□□□ 0.46
TRAF4-211ENST00000478021 DRAXINQ8NBI3 349 aaPredicted RBP17.93■□□□□ 0.46
TRAF4-211ENST00000478021 OR10J5Q8NHC4 309 aa17.93■□□□□ 0.46
TRAF4-211ENST00000478021 PHF21AQ96BD5 680 aa17.93■□□□□ 0.46
TRAF4-211ENST00000478021 TRBV6-7A0A0A0MS04 114 aa17.92■□□□□ 0.46
TRAF4-211ENST00000478021 TRIM64CA6NLI5 447 aa17.92■□□□□ 0.46
TRAF4-211ENST00000478021 H0YJW9 148 aa17.92■□□□□ 0.46
TRAF4-211ENST00000478021 AP4M1O00189 453 aa17.92■□□□□ 0.46
TRAF4-211ENST00000478021 NBR2O15453 112 aa17.92■□□□□ 0.46
TRAF4-211ENST00000478021 KCNAB3O43448 404 aa17.92■□□□□ 0.46
TRAF4-211ENST00000478021 SOX6P35712 828 aa17.92■□□□□ 0.46
TRAF4-211ENST00000478021 LINC00205P59089 165 aa17.92■□□□□ 0.46
TRAF4-211ENST00000478021 DEFA6Q01524 100 aa17.92■□□□□ 0.46
TRAF4-211ENST00000478021 ZNF260Q3ZCT1 412 aa17.92■□□□□ 0.46
TRAF4-211ENST00000478021 HACD4Q5VWC8 232 aa17.92■□□□□ 0.46
TRAF4-211ENST00000478021 ST6GALNAC5Q9BVH7 336 aa17.92■□□□□ 0.46
TRAF4-211ENST00000478021 TOLLIPQ9H0E2 274 aa17.92■□□□□ 0.46
TRAF4-211ENST00000478021 GHITMQ9H3K2 345 aa17.92■□□□□ 0.46
TRAF4-211ENST00000478021 ZNF107Q9UII5 783 aaPredicted RBP17.92■□□□□ 0.46
TRAF4-211ENST00000478021 ETV7Q9Y603 341 aa17.92■□□□□ 0.46
TRAF4-211ENST00000478021 PLXNB1O43157 2135 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms