RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 SSTP61278 116 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 LSM3P62310 102 aaKnown RBP2.88□□□□□ -1.95
UBR3-209ENST00000477461 FABP5Q01469 135 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 PSG7Q13046 419 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 PRDX4Q13162 271 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 OR8B8Q15620 311 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 ALKBH6Q3KRA9 238 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 GLT8D1Q68CQ7 371 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 C22orf42Q6IC83 251 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 STEAP1BQ6NZ63 245 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 UNQ9370/PRO34162Q6UXP9 181 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 UTS2BQ765I0 119 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 LRP11Q86VZ4 500 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 TPRA1Q86W33 373 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 MUC15Q8N387 334 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 ACBD4Q8NC06 268 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 OR2Z1Q8NG97 314 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 OR1M1Q8NGA1 313 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 OR51A4Q8NGJ6 313 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 ZNF420Q8TAQ5 688 aaPredicted RBP2.88□□□□□ -1.95
UBR3-209ENST00000477461 TRMT10AQ8TBZ6 339 aaKnown RBP2.88□□□□□ -1.95
UBR3-209ENST00000477461 RAB2BQ8WUD1 216 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 RGP1Q92546 391 aaPredicted RBP2.88□□□□□ -1.95
UBR3-209ENST00000477461 TMIGD2Q96BF3 282 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 YIPF6Q96EC8 236 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 ADAT3Q96EY9 351 aaPredicted RBP2.88□□□□□ -1.95
UBR3-209ENST00000477461 C14orf79Q96F83 325 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 BORCS8Q96FH0 119 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 RNF170Q96K19 258 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 DERL3Q96Q80 235 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 BCL7BQ9BQE9 202 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 ADAT1Q9BUB4 502 aaKnown RBP2.88□□□□□ -1.95
UBR3-209ENST00000477461 RTL8AQ9BWD3 113 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 MRPL37Q9BZE1 423 aaKnown RBP2.88□□□□□ -1.95
UBR3-209ENST00000477461 CHST5Q9GZS9 411 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 RAB1BQ9H0U4 201 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 OR51E2Q9H255 320 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 TMEM138Q9NPI0 162 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 BATF3Q9NR55 127 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 CBLN4Q9NTU7 201 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 TXNL4BQ9NX01 149 aaKnown RBP2.88□□□□□ -1.95
UBR3-209ENST00000477461 TAS2R4Q9NYW5 299 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 DHRS4-AS1Q9P1J3 65 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 RSL24D1Q9UHA3 163 aaKnown RBP2.88□□□□□ -1.95
UBR3-209ENST00000477461 FOXJ3Q9UPW0 622 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 RHBDD3Q9Y3P4 386 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 MPC1Q9Y5U8 109 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 ROS1P08922 2347 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 ARFGEF3Q5TH69 2177 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 CHD3Q12873 2000 aaKnown RBP2.87□□□□□ -1.95
UBR3-209ENST00000477461 TRAV1-2A0A0B4J238 106 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 LRP5LA4QPB2 252 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 ZSCAN5BA6NJL1 495 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 TMEM210A6NLX4 147 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 LRRC30A6NM36 301 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 SH2D1BO14796 132 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 CTAG2O75638 210 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 GPX5O75715 221 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 SC5DO75845 299 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 GABARAPO95166 117 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 CDRT1O95170 752 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 ALDOBP05062 364 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 RAB3BP20337 219 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 LOXP28300 417 aaPredicted RBP2.87□□□□□ -1.95
UBR3-209ENST00000477461 SDC2P34741 201 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 SOX6P35712 828 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 ZNF93P35789 620 aaPredicted RBP2.87□□□□□ -1.95
UBR3-209ENST00000477461 CRYBB2P43320 205 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 POU3F4P49335 361 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 RBP2P50120 134 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 PPOXP50336 477 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 GPM6AP51674 278 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 VBP1P61758 197 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 RPS11P62280 158 aaKnown RBP eCLIP2.87□□□□□ -1.95
UBR3-209ENST00000477461 GNG3P63215 75 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 TNFAIP6P98066 277 aaPredicted RBP2.87□□□□□ -1.95
UBR3-209ENST00000477461 MXD1Q05195 221 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 INSL4Q14641 139 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 ZNF79Q15937 498 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 CEACAM21Q3KPI0 293 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 DMRTC1Q5HYR2 192 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 FAM27D1Q5T7N8 215 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 RSBN1Q5VWQ0 802 aaPredicted RBP2.87□□□□□ -1.95
UBR3-209ENST00000477461 CD200R1LQ6Q8B3 271 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 ATRAIDQ6UW56 229 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 TMEM91Q6ZNR0 172 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 Q6ZSR3 168 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 ZNF573Q86YE8 665 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 MKXQ8IYA7 352 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 JAGN1Q8N5M9 183 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 OR10AD1Q8NGE0 317 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 OR5A2Q8NGI9 324 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 OR11L1Q8NGX0 322 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 ZNF671Q8TAW3 534 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 OR5P3Q8WZ94 311 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 RPL3LQ92901 407 aaKnown RBP2.87□□□□□ -1.95
UBR3-209ENST00000477461 C12orf43Q96C57 262 aaKnown RBP2.87□□□□□ -1.95
UBR3-209ENST00000477461 ISOC1Q96CN7 298 aa2.87□□□□□ -1.95
UBR3-209ENST00000477461 DGCR14Q96DF8 476 aaKnown RBP2.87□□□□□ -1.95
UBR3-209ENST00000477461 OR2V2Q96R30 315 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms