RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	COMMD3	Q9UBI1	195 aa		10.15	□□□□□ -0.78
FDPS-204	ENST00000461507	NCBP2L	A6PVI3	153 aa	Known RBP	10.14	□□□□□ -0.79
FDPS-204	ENST00000461507	TXNL1	O43396	289 aa		10.14	□□□□□ -0.79
FDPS-204	ENST00000461507	OR2F2	O95006	317 aa		10.14	□□□□□ -0.79
FDPS-204	ENST00000461507	FCER2	P06734	321 aa		10.14	□□□□□ -0.79
FDPS-204	ENST00000461507	GSTP1	P09211	210 aa	Known RBP	10.14	□□□□□ -0.79
FDPS-204	ENST00000461507	GSTT2	P0CG29	244 aa		10.14	□□□□□ -0.79
FDPS-204	ENST00000461507	GSTT2B	P0CG30	244 aa		10.14	□□□□□ -0.79
FDPS-204	ENST00000461507	VDAC2	P45880	294 aa	Predicted RBP	10.14	□□□□□ -0.79
FDPS-204	ENST00000461507	OR3A3	P47888	321 aa		10.14	□□□□□ -0.79
FDPS-204	ENST00000461507	SCAND1	P57086	179 aa		10.14	□□□□□ -0.79
FDPS-204	ENST00000461507	ABCA11P	Q4W5N1	156 aa		10.14	□□□□□ -0.79
FDPS-204	ENST00000461507	FBLN7	Q53RD9	439 aa		10.14	□□□□□ -0.79
FDPS-204	ENST00000461507	UBE2NL	Q5JXB2	153 aa		10.14	□□□□□ -0.79
FDPS-204	ENST00000461507	C16orf82	Q7Z2V1	217 aa		10.14	□□□□□ -0.79
FDPS-204	ENST00000461507	CLVS1	Q8IUQ0	354 aa	Predicted RBP	10.14	□□□□□ -0.79
FDPS-204	ENST00000461507	C11orf44	Q8N8P7	122 aa		10.14	□□□□□ -0.79
FDPS-204	ENST00000461507	OR4A4P	Q8NGN8	299 aa		10.14	□□□□□ -0.79
FDPS-204	ENST00000461507	OR10J5	Q8NHC4	309 aa		10.14	□□□□□ -0.79
FDPS-204	ENST00000461507	EDARADD	Q8WWZ3	215 aa		10.14	□□□□□ -0.79
FDPS-204	ENST00000461507	SLC25A38	Q96DW6	304 aa		10.14	□□□□□ -0.79
FDPS-204	ENST00000461507	MRPL20	Q9BYC9	149 aa	Known RBP	10.14	□□□□□ -0.79
FDPS-204	ENST00000461507	PARP12	Q9H0J9	701 aa	Known RBP	10.14	□□□□□ -0.79
FDPS-204	ENST00000461507	RNF150	Q9ULK6	438 aa		10.14	□□□□□ -0.79
FDPS-204	ENST00000461507	SPATA2	Q9UM82	520 aa		10.14	□□□□□ -0.79
FDPS-204	ENST00000461507	MOB4	Q9Y3A3	225 aa		10.14	□□□□□ -0.79
FDPS-204	ENST00000461507	DNAH3	Q8TD57	4116 aa		10.14	□□□□□ -0.79
FDPS-204	ENST00000461507	SAA2-SAA4	A0A096LPE2	208 aa		10.13	□□□□□ -0.79
FDPS-204	ENST00000461507	ADARB2-AS1	A8MUL3	147 aa		10.13	□□□□□ -0.79
FDPS-204	ENST00000461507		J3QRK9	145 aa		10.13	□□□□□ -0.79
FDPS-204	ENST00000461507	FBXO24	O75426	580 aa		10.13	□□□□□ -0.79
FDPS-204	ENST00000461507	GABARAP	O95166	117 aa		10.13	□□□□□ -0.79
FDPS-204	ENST00000461507	SAA2	P0DJI9	122 aa	Predicted RBP	10.13	□□□□□ -0.79
FDPS-204	ENST00000461507	GPR12	P47775	334 aa		10.13	□□□□□ -0.79
FDPS-204	ENST00000461507	BLCAP	P62952	87 aa		10.13	□□□□□ -0.79
FDPS-204	ENST00000461507	TMEM95	Q3KNT9	176 aa		10.13	□□□□□ -0.79
FDPS-204	ENST00000461507	RPL39P5	Q59GN2	51 aa		10.13	□□□□□ -0.79
FDPS-204	ENST00000461507	IGSF11	Q5DX21	431 aa		10.13	□□□□□ -0.79
FDPS-204	ENST00000461507	HACD4	Q5VWC8	232 aa		10.13	□□□□□ -0.79
FDPS-204	ENST00000461507	ANKRD13B	Q86YJ7	626 aa		10.13	□□□□□ -0.79
FDPS-204	ENST00000461507	C1QL4	Q86Z23	238 aa		10.13	□□□□□ -0.79
FDPS-204	ENST00000461507	OR2T10	Q8NGZ9	312 aa		10.13	□□□□□ -0.79
FDPS-204	ENST00000461507	SLC25A46	Q96AG3	418 aa		10.13	□□□□□ -0.79
FDPS-204	ENST00000461507	S100A16	Q96FQ6	103 aa	Known RBP	10.13	□□□□□ -0.79
FDPS-204	ENST00000461507	ABHD14B	Q96IU4	210 aa		10.13	□□□□□ -0.79
FDPS-204	ENST00000461507	RBM14	Q96PK6	669 aa	Known RBP	10.13	□□□□□ -0.79
FDPS-204	ENST00000461507	S1PR3	Q99500	378 aa		10.13	□□□□□ -0.79
FDPS-204	ENST00000461507	DCSTAMP	Q9H295	470 aa		10.13	□□□□□ -0.79
FDPS-204	ENST00000461507	RDH8	Q9NYR8	311 aa		10.13	□□□□□ -0.79
FDPS-204	ENST00000461507	PIPOX	Q9P0Z9	390 aa		10.13	□□□□□ -0.79
FDPS-204	ENST00000461507	ZNF221	Q9UK13	617 aa		10.13	□□□□□ -0.79
FDPS-204	ENST00000461507	MEIS3P1	A6NDR6	274 aa		10.12	□□□□□ -0.79
FDPS-204	ENST00000461507	CCDC160	A6NGH7	325 aa		10.12	□□□□□ -0.79
FDPS-204	ENST00000461507	FAM25A	B3EWG3	89 aa		10.12	□□□□□ -0.79
FDPS-204	ENST00000461507	FAM25C	B3EWG5	89 aa		10.12	□□□□□ -0.79
FDPS-204	ENST00000461507	FAM25G	B3EWG6	89 aa		10.12	□□□□□ -0.79
FDPS-204	ENST00000461507	ZNF736	B4DX44	427 aa	Predicted RBP	10.12	□□□□□ -0.79
FDPS-204	ENST00000461507	RAB29	O14966	203 aa		10.12	□□□□□ -0.79
FDPS-204	ENST00000461507	DTYMK	P23919	212 aa		10.12	□□□□□ -0.79
FDPS-204	ENST00000461507	RORC	P51449	518 aa		10.12	□□□□□ -0.79
FDPS-204	ENST00000461507	ARPC4	P59998	168 aa		10.12	□□□□□ -0.79
FDPS-204	ENST00000461507	PITPNA	Q00169	270 aa		10.12	□□□□□ -0.79
FDPS-204	ENST00000461507	ZNF260	Q3ZCT1	412 aa		10.12	□□□□□ -0.79
FDPS-204	ENST00000461507	TMEM69	Q5SWH9	247 aa		10.12	□□□□□ -0.79
FDPS-204	ENST00000461507	NDUFA11	Q86Y39	141 aa		10.12	□□□□□ -0.79
FDPS-204	ENST00000461507	RBMXL1	Q96E39	390 aa	Known RBP	10.12	□□□□□ -0.79
FDPS-204	ENST00000461507	C11orf54	Q9H0W9	315 aa	Predicted RBP	10.12	□□□□□ -0.79
FDPS-204	ENST00000461507	IFI27L2	Q9H2X8	130 aa		10.12	□□□□□ -0.79
FDPS-204	ENST00000461507	IFT46	Q9NQC8	304 aa		10.12	□□□□□ -0.79
FDPS-204	ENST00000461507	SCOC	Q9UIL1	159 aa		10.12	□□□□□ -0.79
FDPS-204	ENST00000461507	IGKV1-6	A0A0C4DH72	117 aa		10.11	□□□□□ -0.79
FDPS-204	ENST00000461507		G3V4G9	280 aa		10.11	□□□□□ -0.79
FDPS-204	ENST00000461507		H7C2Y5	167 aa		10.11	□□□□□ -0.79
FDPS-204	ENST00000461507		M0QZK8	103 aa		10.11	□□□□□ -0.79
FDPS-204	ENST00000461507	LANCL1	O43813	399 aa		10.11	□□□□□ -0.79
FDPS-204	ENST00000461507	TMEM127	O75204	238 aa		10.11	□□□□□ -0.79
FDPS-204	ENST00000461507	MOS	P00540	346 aa		10.11	□□□□□ -0.79
FDPS-204	ENST00000461507	TFAP2A	P05549	437 aa		10.11	□□□□□ -0.79
FDPS-204	ENST00000461507	OR8U9	P0C7N5	309 aa		10.11	□□□□□ -0.79
FDPS-204	ENST00000461507	CD28	P10747	220 aa		10.11	□□□□□ -0.79
FDPS-204	ENST00000461507	PTHLH	P12272	177 aa		10.11	□□□□□ -0.79
FDPS-204	ENST00000461507	ALDH3B2	P48448	385 aa		10.11	□□□□□ -0.79
FDPS-204	ENST00000461507	LSAMP	Q13449	338 aa		10.11	□□□□□ -0.79
FDPS-204	ENST00000461507	PNLIPRP3	Q17RR3	467 aa		10.11	□□□□□ -0.79
FDPS-204	ENST00000461507	HIST2H2BD	Q6DRA6	164 aa		10.11	□□□□□ -0.79
FDPS-204	ENST00000461507	MZT2A	Q6P582	158 aa		10.11	□□□□□ -0.79
FDPS-204	ENST00000461507	GLDN	Q6ZMI3	551 aa	Predicted RBP	10.11	□□□□□ -0.79
FDPS-204	ENST00000461507		Q6ZS46	218 aa		10.11	□□□□□ -0.79
FDPS-204	ENST00000461507	THNSL2	Q86YJ6	484 aa		10.11	□□□□□ -0.79
FDPS-204	ENST00000461507	OR8U1	Q8NH10	309 aa		10.11	□□□□□ -0.79
FDPS-204	ENST00000461507	AP3S1	Q92572	193 aa		10.11	□□□□□ -0.79
FDPS-204	ENST00000461507	ST6GALNAC6	Q969X2	333 aa		10.11	□□□□□ -0.79
FDPS-204	ENST00000461507	KCTD12	Q96CX2	325 aa	Known RBP	10.11	□□□□□ -0.79
FDPS-204	ENST00000461507	EAF1	Q96JC9	268 aa	Predicted RBP	10.11	□□□□□ -0.79
FDPS-204	ENST00000461507	OR2D2	Q9H210	308 aa		10.11	□□□□□ -0.79
FDPS-204	ENST00000461507	MRPS7	Q9Y2R9	242 aa	Known RBP	10.11	□□□□□ -0.79
FDPS-204	ENST00000461507	IGKV1D-8	A0A087WSZ0	117 aa		10.1	□□□□□ -0.79
FDPS-204	ENST00000461507		A0A0A6YYH2	397 aa		10.1	□□□□□ -0.79
FDPS-204	ENST00000461507	SMIM31	A0A1B0GVY4	71 aa		10.1	□□□□□ -0.79
FDPS-204	ENST00000461507		A6NJ64	397 aa		10.1	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms