RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 OR3A1P47881 315 aa10.5□□□□□ -0.73
ECHDC1-209ENST00000454591 GLIPR1P48060 266 aa10.5□□□□□ -0.73
ECHDC1-209ENST00000454591 RND2P52198 227 aa10.5□□□□□ -0.73
ECHDC1-209ENST00000454591 DLK1P80370 383 aa10.5□□□□□ -0.73
ECHDC1-209ENST00000454591 HTD2P86397 168 aa10.5□□□□□ -0.73
ECHDC1-209ENST00000454591 TRIP6Q15654 476 aaKnown RBP10.5□□□□□ -0.73
ECHDC1-209ENST00000454591 ZNF726P1Q15940 193 aa10.5□□□□□ -0.73
ECHDC1-209ENST00000454591 VWC2Q2TAL6 325 aa10.5□□□□□ -0.73
ECHDC1-209ENST00000454591 CR1LQ2VPA4 569 aa10.5□□□□□ -0.73
ECHDC1-209ENST00000454591 KRBOX4Q5JUW0 171 aa10.5□□□□□ -0.73
ECHDC1-209ENST00000454591 ATP1A1-AS1Q5TC04 95 aa10.5□□□□□ -0.73
ECHDC1-209ENST00000454591 WDR82Q6UXN9 313 aa10.5□□□□□ -0.73
ECHDC1-209ENST00000454591 MRGPRGQ86SM5 289 aa10.5□□□□□ -0.73
ECHDC1-209ENST00000454591 OR13D1Q8NGV5 346 aa10.5□□□□□ -0.73
ECHDC1-209ENST00000454591 TAF15Q92804 592 aaKnown RBP eCLIP10.5□□□□□ -0.73
ECHDC1-209ENST00000454591 SARAFQ96BY9 339 aa10.5□□□□□ -0.73
ECHDC1-209ENST00000454591 C5orf30Q96GV9 206 aa10.5□□□□□ -0.73
ECHDC1-209ENST00000454591 RCC1LQ96I51 464 aaKnown RBP10.5□□□□□ -0.73
ECHDC1-209ENST00000454591 C20orf24Q9BUV8 137 aa10.5□□□□□ -0.73
ECHDC1-209ENST00000454591 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.5□□□□□ -0.73
ECHDC1-209ENST00000454591 OR14J1Q9UGF5 321 aa10.5□□□□□ -0.73
ECHDC1-209ENST00000454591 PTPRBP23467 1997 aa10.5□□□□□ -0.73
ECHDC1-209ENST00000454591 TRAV39A0A0B4J263 110 aa10.49□□□□□ -0.73
ECHDC1-209ENST00000454591 LRRC30A6NM36 301 aa10.49□□□□□ -0.73
ECHDC1-209ENST00000454591 PMS2P5A8MQ11 134 aa10.49□□□□□ -0.73
ECHDC1-209ENST00000454591 C3orf80F5H4A9 247 aa10.49□□□□□ -0.73
ECHDC1-209ENST00000454591 H3BP45 60 aa10.49□□□□□ -0.73
ECHDC1-209ENST00000454591 WDR1O75083 606 aa10.49□□□□□ -0.73
ECHDC1-209ENST00000454591 LYZL6O75951 148 aa10.49□□□□□ -0.73
ECHDC1-209ENST00000454591 NXPH3O95157 252 aa10.49□□□□□ -0.73
ECHDC1-209ENST00000454591 IFNA1P01562 189 aa10.49□□□□□ -0.73
ECHDC1-209ENST00000454591 HBZP02008 142 aa10.49□□□□□ -0.73
ECHDC1-209ENST00000454591 METTL15P1P0C7V9 234 aa10.49□□□□□ -0.73
ECHDC1-209ENST00000454591 IAPPP10997 89 aa10.49□□□□□ -0.73
ECHDC1-209ENST00000454591 MDKP21741 143 aaPredicted RBP10.49□□□□□ -0.73
ECHDC1-209ENST00000454591 SLC38A11Q08AI6 406 aa10.49□□□□□ -0.73
ECHDC1-209ENST00000454591 IZUMO4Q1ZYL8 232 aa10.49□□□□□ -0.73
ECHDC1-209ENST00000454591 C3orf36Q3SXR2 165 aa10.49□□□□□ -0.73
ECHDC1-209ENST00000454591 ZNF787Q6DD87 383 aa10.49□□□□□ -0.73
ECHDC1-209ENST00000454591 SLC25A24Q6NUK1 477 aa10.49□□□□□ -0.73
ECHDC1-209ENST00000454591 OR1L1Q8NH94 360 aa10.49□□□□□ -0.73
ECHDC1-209ENST00000454591 CA5BP1Q8WTZ4 195 aa10.49□□□□□ -0.73
ECHDC1-209ENST00000454591 CIB3Q96Q77 187 aaPredicted RBP10.49□□□□□ -0.73
ECHDC1-209ENST00000454591 OR4C12Q96R67 309 aa10.49□□□□□ -0.73
ECHDC1-209ENST00000454591 TAAR6Q96RI8 345 aa10.49□□□□□ -0.73
ECHDC1-209ENST00000454591 AGMATQ9BSE5 352 aa10.49□□□□□ -0.73
ECHDC1-209ENST00000454591 RSG1Q9BU20 258 aa10.49□□□□□ -0.73
ECHDC1-209ENST00000454591 RBKSQ9H477 322 aa10.49□□□□□ -0.73
ECHDC1-209ENST00000454591 NCOR1P1Q9H4R4 102 aa10.49□□□□□ -0.73
ECHDC1-209ENST00000454591 DOCK7Q96N67 2140 aa10.49□□□□□ -0.73
ECHDC1-209ENST00000454591 hCG_1809904A0A1W2PP81 198 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 A0A1W2PPE3 182 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 A0A1W2PR64 198 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 A0A1W2PRV1 198 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 AHRRA9YTQ3 701 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 SOX15O60248 233 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 MBP02144 154 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 GRPP07492 148 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 ADH4P08319 380 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 HOXC12P31275 282 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 IL2RGP31785 369 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 BRWD1-AS2P59051 145 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 ELOBQ15370 118 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 SMIM21Q3B7S5 101 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 ZNF718Q3SXZ3 478 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 Q6ZR03 302 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 TMPRSS7Q7RTY8 843 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 LILRB2Q8N423 598 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 TRIB1Q96RU8 372 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 HSD17B10Q99714 261 aaKnown RBP10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 TMEM147Q9BVK8 224 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 OR2D2Q9H210 308 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 ASCL3Q9NQ33 180 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 VAX2Q9UIW0 290 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 TINAGQ9UJW2 476 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 A0A1B0GV50 99 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 ODAMA1E959 279 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 CEACAM4O75871 244 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 CGAP01215 116 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 CECR9P0C854 216 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 RPL30P62888 115 aaKnown RBP10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 PMP22Q01453 160 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 P2RY6Q15077 328 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 TMEM249Q2WGJ8 235 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 C9orf106Q8NAJ2 232 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 CTDSP1Q9GZU7 261 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 SDF2L1Q9HCN8 221 aa10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 CHD3Q12873 2000 aaKnown RBP10.48□□□□□ -0.73
ECHDC1-209ENST00000454591 PCNX2A6NKB5 2137 aa10.47□□□□□ -0.73
ECHDC1-209ENST00000454591 IGHV2OR16-5A0A0B4J2B6 119 aa10.47□□□□□ -0.73
ECHDC1-209ENST00000454591 C15orf65H3BRN8 121 aa10.47□□□□□ -0.73
ECHDC1-209ENST00000454591 ITGB1BP1O14713 200 aa10.47□□□□□ -0.73
ECHDC1-209ENST00000454591 CYB5R3P00387 301 aaPredicted RBP10.47□□□□□ -0.73
ECHDC1-209ENST00000454591 SPINK2P20155 84 aa10.47□□□□□ -0.73
ECHDC1-209ENST00000454591 EIF2S3P41091 472 aaKnown RBP10.47□□□□□ -0.73
ECHDC1-209ENST00000454591 B2MP61769 119 aa10.47□□□□□ -0.73
ECHDC1-209ENST00000454591 GNB2P62879 340 aa10.47□□□□□ -0.73
ECHDC1-209ENST00000454591 FABP9Q0Z7S8 132 aa10.47□□□□□ -0.73
ECHDC1-209ENST00000454591 PDLIM3Q53GG5 364 aaPredicted RBP10.47□□□□□ -0.73
ECHDC1-209ENST00000454591 SPANXN5Q5MJ07 72 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms