RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 MOGAT2Q3SYC2 334 aa12.95□□□□□ -0.34
UBE2D4-209ENST00000454428 LY6G6FQ5SQ64 297 aa12.95□□□□□ -0.34
UBE2D4-209ENST00000454428 SLC25A30Q5SVS4 291 aa12.95□□□□□ -0.34
UBE2D4-209ENST00000454428 RAB12Q6IQ22 244 aa12.95□□□□□ -0.34
UBE2D4-209ENST00000454428 ZDHHC13Q8IUH4 622 aa12.95□□□□□ -0.34
UBE2D4-209ENST00000454428 ORAI1Q96D31 301 aa12.95□□□□□ -0.34
UBE2D4-209ENST00000454428 MRPS24Q96EL2 167 aaKnown RBP12.95□□□□□ -0.34
UBE2D4-209ENST00000454428 SRD5A3Q9H8P0 318 aa12.95□□□□□ -0.34
UBE2D4-209ENST00000454428 SPACA1Q9HBV2 294 aa12.95□□□□□ -0.34
UBE2D4-209ENST00000454428 RBMXL2O75526 392 aaKnown RBP12.94□□□□□ -0.34
UBE2D4-209ENST00000454428 CNIH1O95406 144 aa12.94□□□□□ -0.34
UBE2D4-209ENST00000454428 RPSAP08865 295 aaKnown RBP12.94□□□□□ -0.34
UBE2D4-209ENST00000454428 CD40LGP29965 261 aa12.94□□□□□ -0.34
UBE2D4-209ENST00000454428 GTF2A1P52655 376 aaPredicted RBP12.94□□□□□ -0.34
UBE2D4-209ENST00000454428 GYS2P54840 703 aa12.94□□□□□ -0.34
UBE2D4-209ENST00000454428 PSG5Q15238 335 aa12.94□□□□□ -0.34
UBE2D4-209ENST00000454428 CD300EQ496F6 205 aaPredicted RBP12.94□□□□□ -0.34
UBE2D4-209ENST00000454428 RPL39P5Q59GN2 51 aa12.94□□□□□ -0.34
UBE2D4-209ENST00000454428 SIGIRRQ6IA17 410 aa12.94□□□□□ -0.34
UBE2D4-209ENST00000454428 FAM71F2Q6NXP2 309 aa12.94□□□□□ -0.34
UBE2D4-209ENST00000454428 OR5T1Q8NG75 326 aa12.94□□□□□ -0.34
UBE2D4-209ENST00000454428 OR2K2Q8NGT1 345 aa12.94□□□□□ -0.34
UBE2D4-209ENST00000454428 MRPL30Q8TCC3 161 aaKnown RBP12.94□□□□□ -0.34
UBE2D4-209ENST00000454428 GATAD1Q8WUU5 269 aa12.94□□□□□ -0.34
UBE2D4-209ENST00000454428 OVOL2Q9BRP0 275 aa12.94□□□□□ -0.34
UBE2D4-209ENST00000454428 TMEM138Q9NPI0 162 aa12.94□□□□□ -0.34
UBE2D4-209ENST00000454428 PAK1IP1Q9NWT1 392 aaPredicted RBP12.94□□□□□ -0.34
UBE2D4-209ENST00000454428 METTL1Q9UBP6 276 aaKnown RBP12.94□□□□□ -0.34
UBE2D4-209ENST00000454428 AASSQ9UDR5 926 aa12.94□□□□□ -0.34
UBE2D4-209ENST00000454428 CXorf65A6NEN9 183 aa12.93□□□□□ -0.34
UBE2D4-209ENST00000454428 H3BUA1 57 aa12.93□□□□□ -0.34
UBE2D4-209ENST00000454428 ST8SIA5O15466 376 aa12.93□□□□□ -0.34
UBE2D4-209ENST00000454428 ZNF780AO75290 641 aaPredicted RBP12.93□□□□□ -0.34
UBE2D4-209ENST00000454428 MAS1P04201 325 aa12.93□□□□□ -0.34
UBE2D4-209ENST00000454428 GNGT1P63211 74 aa12.93□□□□□ -0.34
UBE2D4-209ENST00000454428 DMKNQ6E0U4 476 aaPredicted RBP12.93□□□□□ -0.34
UBE2D4-209ENST00000454428 ZNF343Q6P1L6 599 aa12.93□□□□□ -0.34
UBE2D4-209ENST00000454428 AMIGO2Q86SJ2 522 aa12.93□□□□□ -0.34
UBE2D4-209ENST00000454428 LAX1Q8IWV1 398 aa12.93□□□□□ -0.34
UBE2D4-209ENST00000454428 OR5AN1Q8NGI8 311 aa12.93□□□□□ -0.34
UBE2D4-209ENST00000454428 TRUB1Q8WWH5 349 aaKnown RBP12.93□□□□□ -0.34
UBE2D4-209ENST00000454428 PARP12Q9H0J9 701 aaKnown RBP12.93□□□□□ -0.34
UBE2D4-209ENST00000454428 ZNF355PQ9NSJ1 428 aa12.93□□□□□ -0.34
UBE2D4-209ENST00000454428 PEF1Q9UBV8 284 aaKnown RBP12.93□□□□□ -0.34
UBE2D4-209ENST00000454428 SLC23A1Q9UHI7 598 aa12.93□□□□□ -0.34
UBE2D4-209ENST00000454428 PEX16Q9Y5Y5 336 aa12.93□□□□□ -0.34
UBE2D4-209ENST00000454428 A0A0G2JLM5 398 aa12.92□□□□□ -0.34
UBE2D4-209ENST00000454428 UBE2QL1A1L167 161 aa12.92□□□□□ -0.34
UBE2D4-209ENST00000454428 OR5H14A6NHG9 310 aa12.92□□□□□ -0.34
UBE2D4-209ENST00000454428 OR11H12B2RN74 326 aa12.92□□□□□ -0.34
UBE2D4-209ENST00000454428 CA11O75493 328 aa12.92□□□□□ -0.34
UBE2D4-209ENST00000454428 BDKRB2P30411 391 aa12.92□□□□□ -0.34
UBE2D4-209ENST00000454428 SNRPGP62308 76 aaKnown RBP12.92□□□□□ -0.34
UBE2D4-209ENST00000454428 XAF1Q6GPH4 301 aa12.92□□□□□ -0.34
UBE2D4-209ENST00000454428 CEMP1Q6PRD7 247 aaPredicted RBP12.92□□□□□ -0.34
UBE2D4-209ENST00000454428 ZNF554Q86TJ5 538 aa12.92□□□□□ -0.34
UBE2D4-209ENST00000454428 OR2AK2Q8NG84 335 aa12.92□□□□□ -0.34
UBE2D4-209ENST00000454428 GRPEL2Q8TAA5 225 aa12.92□□□□□ -0.34
UBE2D4-209ENST00000454428 S100A13Q99584 98 aa12.92□□□□□ -0.34
UBE2D4-209ENST00000454428 ERVK13-1Q9NX77 482 aa12.92□□□□□ -0.34
UBE2D4-209ENST00000454428 NUPR2A6NF83 97 aa12.91□□□□□ -0.34
UBE2D4-209ENST00000454428 OR2A4O95047 310 aa12.91□□□□□ -0.34
UBE2D4-209ENST00000454428 GSTP1P09211 210 aaKnown RBP12.91□□□□□ -0.34
UBE2D4-209ENST00000454428 IGFBP3P17936 291 aaPredicted RBP12.91□□□□□ -0.34
UBE2D4-209ENST00000454428 FXYD3Q14802 87 aa12.91□□□□□ -0.34
UBE2D4-209ENST00000454428 C6orf141Q5SZD1 244 aa12.91□□□□□ -0.34
UBE2D4-209ENST00000454428 ZNF184Q99676 751 aaPredicted RBP12.91□□□□□ -0.34
UBE2D4-209ENST00000454428 WASHC3Q9Y3C0 194 aa12.91□□□□□ -0.34
UBE2D4-209ENST00000454428 PKD1P98161 4303 aa12.9□□□□□ -0.34
UBE2D4-209ENST00000454428 PROP1O75360 226 aa12.9□□□□□ -0.34
UBE2D4-209ENST00000454428 RBBP9O75884 186 aa12.9□□□□□ -0.34
UBE2D4-209ENST00000454428 IGKV1-16P04430 117 aa12.9□□□□□ -0.34
UBE2D4-209ENST00000454428 EDN2P20800 178 aa12.9□□□□□ -0.34
UBE2D4-209ENST00000454428 MRPL28Q13084 256 aaKnown RBP12.9□□□□□ -0.34
UBE2D4-209ENST00000454428 HMGN3Q15651 99 aa12.9□□□□□ -0.34
UBE2D4-209ENST00000454428 RPEL1Q2QD12 228 aa12.9□□□□□ -0.34
UBE2D4-209ENST00000454428 BVESQ8NE79 360 aa12.9□□□□□ -0.34
UBE2D4-209ENST00000454428 GPR148Q8TDV2 347 aa12.9□□□□□ -0.34
UBE2D4-209ENST00000454428 GHSRQ92847 366 aa12.9□□□□□ -0.34
UBE2D4-209ENST00000454428 OR14A2Q96R54 314 aa12.9□□□□□ -0.34
UBE2D4-209ENST00000454428 RNF5Q99942 180 aa12.9□□□□□ -0.34
UBE2D4-209ENST00000454428 TINAGL1Q9GZM7 467 aaPredicted RBP12.9□□□□□ -0.34
UBE2D4-209ENST00000454428 BANF2Q9H503 90 aa12.9□□□□□ -0.34
UBE2D4-209ENST00000454428 IMPAD1Q9NX62 359 aa12.9□□□□□ -0.34
UBE2D4-209ENST00000454428 SLC2A8Q9NY64 477 aa12.9□□□□□ -0.34
UBE2D4-209ENST00000454428 KCNIP1Q9NZI2 227 aa12.9□□□□□ -0.34
UBE2D4-209ENST00000454428 PIPOXQ9P0Z9 390 aa12.9□□□□□ -0.34
UBE2D4-209ENST00000454428 A0A0J9YWU9 116 aa12.89□□□□□ -0.35
UBE2D4-209ENST00000454428 H7C2Y5 167 aa12.89□□□□□ -0.35
UBE2D4-209ENST00000454428 RAB29O14966 203 aa12.89□□□□□ -0.35
UBE2D4-209ENST00000454428 SLC22A1O15245 554 aa12.89□□□□□ -0.35
UBE2D4-209ENST00000454428 CD2P06729 351 aa12.89□□□□□ -0.35
UBE2D4-209ENST00000454428 MC5RP33032 325 aa12.89□□□□□ -0.35
UBE2D4-209ENST00000454428 GBX2P52951 348 aaPredicted RBP12.89□□□□□ -0.35
UBE2D4-209ENST00000454428 LINC00205P59089 165 aa12.89□□□□□ -0.35
UBE2D4-209ENST00000454428 PPP3R1P63098 170 aa12.89□□□□□ -0.35
UBE2D4-209ENST00000454428 DEFB114Q30KQ6 69 aa12.89□□□□□ -0.35
UBE2D4-209ENST00000454428 MEDAGQ5VYS4 303 aa12.89□□□□□ -0.35
UBE2D4-209ENST00000454428 MUL1Q969V5 352 aa12.89□□□□□ -0.35
UBE2D4-209ENST00000454428 GALMQ96C23 342 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms