RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 MOB1BQ7L9L4 216 aa12.89□□□□□ -0.35
NCKIPSD-208ENST00000454134 ZNF367Q7RTV3 350 aa12.89□□□□□ -0.35
NCKIPSD-208ENST00000454134 RAX2Q96IS3 184 aa12.89□□□□□ -0.35
NCKIPSD-208ENST00000454134 ABHD14BQ96IU4 210 aa12.89□□□□□ -0.35
NCKIPSD-208ENST00000454134 KCTD7Q96MP8 289 aa12.89□□□□□ -0.35
NCKIPSD-208ENST00000454134 P2RX4Q99571 388 aa12.89□□□□□ -0.35
NCKIPSD-208ENST00000454134 ZNF251Q9BRH9 671 aa12.89□□□□□ -0.35
NCKIPSD-208ENST00000454134 PECRQ9BY49 303 aa12.89□□□□□ -0.35
NCKIPSD-208ENST00000454134 RIMS4Q9H426 269 aaPredicted RBP12.89□□□□□ -0.35
NCKIPSD-208ENST00000454134 SLC23A1Q9UHI7 598 aa12.89□□□□□ -0.35
NCKIPSD-208ENST00000454134 HSF4Q9ULV5 492 aa12.89□□□□□ -0.35
NCKIPSD-208ENST00000454134 WSB1Q9Y6I7 421 aa12.89□□□□□ -0.35
NCKIPSD-208ENST00000454134 TMEM272A0A1B0GTI8 110 aa12.88□□□□□ -0.35
NCKIPSD-208ENST00000454134 SHISA3A0PJX4 238 aa12.88□□□□□ -0.35
NCKIPSD-208ENST00000454134 K7EIL1 84 aa12.88□□□□□ -0.35
NCKIPSD-208ENST00000454134 CCL24O00175 119 aa12.88□□□□□ -0.35
NCKIPSD-208ENST00000454134 RAB29O14966 203 aa12.88□□□□□ -0.35
NCKIPSD-208ENST00000454134 SLC6A1P30531 599 aa12.88□□□□□ -0.35
NCKIPSD-208ENST00000454134 RAB25P57735 213 aa12.88□□□□□ -0.35
NCKIPSD-208ENST00000454134 PLAC9Q5JTB6 97 aa12.88□□□□□ -0.35
NCKIPSD-208ENST00000454134 GLDNQ6ZMI3 551 aaPredicted RBP12.88□□□□□ -0.35
NCKIPSD-208ENST00000454134 Q9N2K0 584 aa12.88□□□□□ -0.35
NCKIPSD-208ENST00000454134 C12orf4Q9NQ89 552 aa12.88□□□□□ -0.35
NCKIPSD-208ENST00000454134 PIPOXQ9P0Z9 390 aa12.88□□□□□ -0.35
NCKIPSD-208ENST00000454134 BLOC1S6Q9UL45 172 aa12.88□□□□□ -0.35
NCKIPSD-208ENST00000454134 WI2-2373I1.2A0A1W2PRP0 233 aa12.87□□□□□ -0.35
NCKIPSD-208ENST00000454134 G3V318 75 aa12.87□□□□□ -0.35
NCKIPSD-208ENST00000454134 LDLRAD4O15165 306 aa12.87□□□□□ -0.35
NCKIPSD-208ENST00000454134 ATP6V0E1O15342 81 aa12.87□□□□□ -0.35
NCKIPSD-208ENST00000454134 NBR2O15453 112 aa12.87□□□□□ -0.35
NCKIPSD-208ENST00000454134 HSPA12AO43301 675 aa12.87□□□□□ -0.35
NCKIPSD-208ENST00000454134 DENRO43583 198 aaKnown RBP12.87□□□□□ -0.35
NCKIPSD-208ENST00000454134 IGHG4P01861 327 aa12.87□□□□□ -0.35
NCKIPSD-208ENST00000454134 IGF1P05019 195 aa12.87□□□□□ -0.35
NCKIPSD-208ENST00000454134 ELANEP08246 267 aa12.87□□□□□ -0.35
NCKIPSD-208ENST00000454134 CT45A6P0DMU7 189 aa12.87□□□□□ -0.35
NCKIPSD-208ENST00000454134 CT45A5P0DMU8 189 aa12.87□□□□□ -0.35
NCKIPSD-208ENST00000454134 CT45A7P0DMV0 189 aa12.87□□□□□ -0.35
NCKIPSD-208ENST00000454134 CEACAM6P40199 344 aa12.87□□□□□ -0.35
NCKIPSD-208ENST00000454134 C5orf64Q2M2E5 130 aa12.87□□□□□ -0.35
NCKIPSD-208ENST00000454134 RNF152Q8N8N0 203 aa12.87□□□□□ -0.35
NCKIPSD-208ENST00000454134 CMSS1Q9BQ75 279 aaKnown RBP12.87□□□□□ -0.35
NCKIPSD-208ENST00000454134 C11orf54Q9H0W9 315 aaPredicted RBP12.87□□□□□ -0.35
NCKIPSD-208ENST00000454134 PARP11Q9NR21 331 aa12.87□□□□□ -0.35
NCKIPSD-208ENST00000454134 RNF150Q9ULK6 438 aa12.87□□□□□ -0.35
NCKIPSD-208ENST00000454134 RAB26Q9ULW5 256 aa12.87□□□□□ -0.35
NCKIPSD-208ENST00000454134 DNAH3Q8TD57 4116 aa12.87□□□□□ -0.35
NCKIPSD-208ENST00000454134 IGHV7-81A0A0B4J1V7 117 aa12.86□□□□□ -0.35
NCKIPSD-208ENST00000454134 ATP6V1G2O95670 118 aa12.86□□□□□ -0.35
NCKIPSD-208ENST00000454134 ZBTB25P24278 435 aa12.86□□□□□ -0.35
NCKIPSD-208ENST00000454134 CDX1P47902 265 aaPredicted RBP12.86□□□□□ -0.35
NCKIPSD-208ENST00000454134 PSMD7P51665 324 aa12.86□□□□□ -0.35
NCKIPSD-208ENST00000454134 MOGAT2Q3SYC2 334 aa12.86□□□□□ -0.35
NCKIPSD-208ENST00000454134 FAM71F2Q6NXP2 309 aa12.86□□□□□ -0.35
NCKIPSD-208ENST00000454134 OR56B1Q8NGI3 324 aa12.86□□□□□ -0.35
NCKIPSD-208ENST00000454134 AGMATQ9BSE5 352 aa12.86□□□□□ -0.35
NCKIPSD-208ENST00000454134 OR51J1Q9H342 316 aa12.86□□□□□ -0.35
NCKIPSD-208ENST00000454134 NDUFB11Q9NX14 153 aa12.86□□□□□ -0.35
NCKIPSD-208ENST00000454134 RAB22AQ9UL26 194 aa12.86□□□□□ -0.35
NCKIPSD-208ENST00000454134 A0A0B4J203 849 aa12.85□□□□□ -0.35
NCKIPSD-208ENST00000454134 IGKV1-6A0A0C4DH72 117 aa12.85□□□□□ -0.35
NCKIPSD-208ENST00000454134 HLA-DRB1P01911 266 aa12.85□□□□□ -0.35
NCKIPSD-208ENST00000454134 PSMB8P28062 276 aa12.85□□□□□ -0.35
NCKIPSD-208ENST00000454134 EGFEM1PQ0D2K5 195 aa12.85□□□□□ -0.35
NCKIPSD-208ENST00000454134 LIN54Q6MZP7 749 aa12.85□□□□□ -0.35
NCKIPSD-208ENST00000454134 CD200R1LQ6Q8B3 271 aa12.85□□□□□ -0.35
NCKIPSD-208ENST00000454134 DRAXINQ8NBI3 349 aaPredicted RBP12.85□□□□□ -0.35
NCKIPSD-208ENST00000454134 NPBQ8NG41 125 aa12.85□□□□□ -0.35
NCKIPSD-208ENST00000454134 DPF1Q92782 380 aa12.85□□□□□ -0.35
NCKIPSD-208ENST00000454134 KLK15Q9H2R5 256 aa12.85□□□□□ -0.35
NCKIPSD-208ENST00000454134 FBXL15Q9H469 300 aa12.85□□□□□ -0.35
NCKIPSD-208ENST00000454134 KIAA1456Q9P272 454 aa12.85□□□□□ -0.35
NCKIPSD-208ENST00000454134 MGAT4AQ9UM21 535 aa12.85□□□□□ -0.35
NCKIPSD-208ENST00000454134 KCNK7Q9Y2U2 307 aa12.85□□□□□ -0.35
NCKIPSD-208ENST00000454134 TRAV1-2A0A0B4J238 106 aa12.84□□□□□ -0.35
NCKIPSD-208ENST00000454134 SMIM30A4D0T7 59 aa12.84□□□□□ -0.35
NCKIPSD-208ENST00000454134 IFITM5A6NNB3 132 aa12.84□□□□□ -0.35
NCKIPSD-208ENST00000454134 TRDCB7Z8K6 153 aa12.84□□□□□ -0.35
NCKIPSD-208ENST00000454134 H0YJW9 148 aa12.84□□□□□ -0.35
NCKIPSD-208ENST00000454134 H7C2Y5 167 aa12.84□□□□□ -0.35
NCKIPSD-208ENST00000454134 ITGB1BP1O14713 200 aa12.84□□□□□ -0.35
NCKIPSD-208ENST00000454134 PDCD5O14737 125 aa12.84□□□□□ -0.35
NCKIPSD-208ENST00000454134 PROP1O75360 226 aa12.84□□□□□ -0.35
NCKIPSD-208ENST00000454134 NDUFA3O95167 84 aa12.84□□□□□ -0.35
NCKIPSD-208ENST00000454134 OR5H8P0DN80 308 aa12.84□□□□□ -0.35
NCKIPSD-208ENST00000454134 MYL9P24844 172 aa12.84□□□□□ -0.35
NCKIPSD-208ENST00000454134 PPIFP30405 207 aaKnown RBP12.84□□□□□ -0.35
NCKIPSD-208ENST00000454134 LINC00205P59089 165 aa12.84□□□□□ -0.35
NCKIPSD-208ENST00000454134 NDPQ00604 133 aa12.84□□□□□ -0.35
NCKIPSD-208ENST00000454134 KIR2DS1Q14954 304 aa12.84□□□□□ -0.35
NCKIPSD-208ENST00000454134 DEFB121Q5J5C9 76 aa12.84□□□□□ -0.35
NCKIPSD-208ENST00000454134 C22orf42Q6IC83 251 aa12.84□□□□□ -0.35
NCKIPSD-208ENST00000454134 OR8U1Q8NH10 309 aa12.84□□□□□ -0.35
NCKIPSD-208ENST00000454134 EDARADDQ8WWZ3 215 aa12.84□□□□□ -0.35
NCKIPSD-208ENST00000454134 RAB3CQ96E17 227 aa12.84□□□□□ -0.35
NCKIPSD-208ENST00000454134 MCRIP2Q9BUT9 160 aaKnown RBP12.84□□□□□ -0.35
NCKIPSD-208ENST00000454134 GPR61Q9BZJ8 451 aa12.84□□□□□ -0.35
NCKIPSD-208ENST00000454134 ZNF580Q9UK33 172 aa12.84□□□□□ -0.35
NCKIPSD-208ENST00000454134 A0A075B6Q4 140 aa12.83□□□□□ -0.36
NCKIPSD-208ENST00000454134 TRAV41A0A0B4J266 112 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 159.1 ms