RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	ZNF221	Q9UK13	617 aa		10.64	□□□□□ -0.71
SF1-206	ENST00000413725		V9GYH0	126 aa		10.64	□□□□□ -0.71
SF1-206	ENST00000413725	VGLL3	A8MV65	326 aa		10.63	□□□□□ -0.71
SF1-206	ENST00000413725	ZNF736	B4DX44	427 aa	Predicted RBP	10.63	□□□□□ -0.71
SF1-206	ENST00000413725	RAB29	O14966	203 aa		10.63	□□□□□ -0.71
SF1-206	ENST00000413725	TXNL1	O43396	289 aa		10.63	□□□□□ -0.71
SF1-206	ENST00000413725	GSTZ1	O43708	216 aa	Predicted RBP	10.63	□□□□□ -0.71
SF1-206	ENST00000413725	PMP2	P02689	132 aa		10.63	□□□□□ -0.71
SF1-206	ENST00000413725	GAPDH	P04406	335 aa	Known RBP	10.63	□□□□□ -0.71
SF1-206	ENST00000413725	TBP	P20226	339 aa		10.63	□□□□□ -0.71
SF1-206	ENST00000413725	NFYA	P23511	347 aa	Predicted RBP	10.63	□□□□□ -0.71
SF1-206	ENST00000413725	HLA-DMA	P28067	261 aa		10.63	□□□□□ -0.71
SF1-206	ENST00000413725	BRS3	P32247	399 aa		10.63	□□□□□ -0.71
SF1-206	ENST00000413725	HRH1	P35367	487 aa		10.63	□□□□□ -0.71
SF1-206	ENST00000413725	TAS2R19	P59542	299 aa		10.63	□□□□□ -0.71
SF1-206	ENST00000413725	ZNF816	Q0VGE8	651 aa	Predicted RBP	10.63	□□□□□ -0.71
SF1-206	ENST00000413725	PLA1A	Q53H76	456 aa		10.63	□□□□□ -0.71
SF1-206	ENST00000413725	FAM71F2	Q6NXP2	309 aa		10.63	□□□□□ -0.71
SF1-206	ENST00000413725	LINC00299	Q6ZSB3	139 aa		10.63	□□□□□ -0.71
SF1-206	ENST00000413725	DYNAP	Q8N1N2	210 aa		10.63	□□□□□ -0.71
SF1-206	ENST00000413725	TMEM86B	Q8N661	226 aa		10.63	□□□□□ -0.71
SF1-206	ENST00000413725	OR5R1	Q8NH85	324 aa		10.63	□□□□□ -0.71
SF1-206	ENST00000413725	S1PR3	Q99500	378 aa		10.63	□□□□□ -0.71
SF1-206	ENST00000413725	IFI27L2	Q9H2X8	130 aa		10.63	□□□□□ -0.71
SF1-206	ENST00000413725	TAS2R8	Q9NYW2	309 aa		10.63	□□□□□ -0.71
SF1-206	ENST00000413725	ZNF107	Q9UII5	783 aa	Predicted RBP	10.63	□□□□□ -0.71
SF1-206	ENST00000413725	OR2W1	Q9Y3N9	320 aa		10.63	□□□□□ -0.71
SF1-206	ENST00000413725	POMT1	Q9Y6A1	747 aa		10.63	□□□□□ -0.71
SF1-206	ENST00000413725	SAA2-SAA4	A0A096LPE2	208 aa		10.62	□□□□□ -0.71
SF1-206	ENST00000413725	DNAJC9-AS1	A6NH13	148 aa		10.62	□□□□□ -0.71
SF1-206	ENST00000413725		H3BUX3	64 aa		10.62	□□□□□ -0.71
SF1-206	ENST00000413725	HOXA3	O43365	443 aa	Predicted RBP	10.62	□□□□□ -0.71
SF1-206	ENST00000413725	LANCL1	O43813	399 aa		10.62	□□□□□ -0.71
SF1-206	ENST00000413725	CSF1	P09603	554 aa		10.62	□□□□□ -0.71
SF1-206	ENST00000413725	OR8U9	P0C7N5	309 aa		10.62	□□□□□ -0.71
SF1-206	ENST00000413725	SAA2	P0DJI9	122 aa	Predicted RBP	10.62	□□□□□ -0.71
SF1-206	ENST00000413725	PAX6	P26367	422 aa		10.62	□□□□□ -0.71
SF1-206	ENST00000413725	FCGR2C	P31995	323 aa		10.62	□□□□□ -0.71
SF1-206	ENST00000413725	IER3	P46695	156 aa		10.62	□□□□□ -0.71
SF1-206	ENST00000413725	GPR12	P47775	334 aa		10.62	□□□□□ -0.71
SF1-206	ENST00000413725	DYNLT3	P51808	116 aa		10.62	□□□□□ -0.71
SF1-206	ENST00000413725	LUM	P51884	338 aa	Predicted RBP	10.62	□□□□□ -0.71
SF1-206	ENST00000413725	DYRK1A	Q13627	763 aa		10.62	□□□□□ -0.71
SF1-206	ENST00000413725	ZNF79	Q15937	498 aa		10.62	□□□□□ -0.71
SF1-206	ENST00000413725	RNASE10	Q5GAN6	216 aa	Known RBP	10.62	□□□□□ -0.71
SF1-206	ENST00000413725	TGIF2LX	Q8IUE1	241 aa		10.62	□□□□□ -0.71
SF1-206	ENST00000413725	LYSMD2	Q8IV50	215 aa		10.62	□□□□□ -0.71
SF1-206	ENST00000413725	TMEM229B	Q8NBD8	167 aa		10.62	□□□□□ -0.71
SF1-206	ENST00000413725	OR8U1	Q8NH10	309 aa		10.62	□□□□□ -0.71
SF1-206	ENST00000413725	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	10.62	□□□□□ -0.71
SF1-206	ENST00000413725	ST6GALNAC6	Q969X2	333 aa		10.62	□□□□□ -0.71
SF1-206	ENST00000413725	ABHD14B	Q96IU4	210 aa		10.62	□□□□□ -0.71
SF1-206	ENST00000413725	AGMAT	Q9BSE5	352 aa		10.62	□□□□□ -0.71
SF1-206	ENST00000413725	OR2D2	Q9H210	308 aa		10.62	□□□□□ -0.71
SF1-206	ENST00000413725	RBMX2	Q9Y388	322 aa	Known RBP	10.62	□□□□□ -0.71
SF1-206	ENST00000413725		A0A1W2PPI3	338 aa		10.61	□□□□□ -0.71
SF1-206	ENST00000413725	CLDN34	H7C241	214 aa		10.61	□□□□□ -0.71
SF1-206	ENST00000413725	TUSC2	O75896	110 aa		10.61	□□□□□ -0.71
SF1-206	ENST00000413725	IGHV4-59	P01825	116 aa		10.61	□□□□□ -0.71
SF1-206	ENST00000413725	IFNA6	P05013	189 aa		10.61	□□□□□ -0.71
SF1-206	ENST00000413725	REG1B	P48304	166 aa		10.61	□□□□□ -0.71
SF1-206	ENST00000413725	RFX2	P48378	723 aa		10.61	□□□□□ -0.71
SF1-206	ENST00000413725	HERV-K104	P61576	105 aa		10.61	□□□□□ -0.71
SF1-206	ENST00000413725	TSPAN5	P62079	268 aa		10.61	□□□□□ -0.71
SF1-206	ENST00000413725	ZNF45	Q02386	682 aa		10.61	□□□□□ -0.71
SF1-206	ENST00000413725	ZNF833P	Q6ZTB9	187 aa		10.61	□□□□□ -0.71
SF1-206	ENST00000413725	OVCH2	Q7RTZ1	564 aa		10.61	□□□□□ -0.71
SF1-206	ENST00000413725	MOB3B	Q86TA1	216 aa		10.61	□□□□□ -0.71
SF1-206	ENST00000413725	ODF3L1	Q8IXM7	274 aa		10.61	□□□□□ -0.71
SF1-206	ENST00000413725		Q8N402	240 aa		10.61	□□□□□ -0.71
SF1-206	ENST00000413725	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	10.61	□□□□□ -0.71
SF1-206	ENST00000413725	RNF150	Q9ULK6	438 aa		10.61	□□□□□ -0.71
SF1-206	ENST00000413725	NF1	P21359	2839 aa		10.61	□□□□□ -0.71
SF1-206	ENST00000413725	IGHV1-3	A0A0C4DH29	117 aa		10.6	□□□□□ -0.71
SF1-206	ENST00000413725	TRIM77	I1YAP6	450 aa		10.6	□□□□□ -0.71
SF1-206	ENST00000413725	TIMM23	O14925	209 aa		10.6	□□□□□ -0.71
SF1-206	ENST00000413725	SLC22A5	O76082	557 aa		10.6	□□□□□ -0.71
SF1-206	ENST00000413725	PPY	P01298	95 aa		10.6	□□□□□ -0.71
SF1-206	ENST00000413725	CD3D	P04234	171 aa		10.6	□□□□□ -0.71
SF1-206	ENST00000413725	AADAC	P22760	399 aa		10.6	□□□□□ -0.71
SF1-206	ENST00000413725	DIAPH2-AS1	Q14236	149 aa		10.6	□□□□□ -0.71
SF1-206	ENST00000413725	SLC9A3R2	Q15599	337 aa		10.6	□□□□□ -0.71
SF1-206	ENST00000413725	VAX1	Q5SQQ9	334 aa		10.6	□□□□□ -0.71
SF1-206	ENST00000413725	STEAP1B	Q6NZ63	245 aa		10.6	□□□□□ -0.71
SF1-206	ENST00000413725	TMEM17	Q86X19	198 aa		10.6	□□□□□ -0.71
SF1-206	ENST00000413725	DRAM1	Q8N682	238 aa		10.6	□□□□□ -0.71
SF1-206	ENST00000413725	ZDHHC22	Q8N966	263 aa		10.6	□□□□□ -0.71
SF1-206	ENST00000413725	GDPD1	Q8N9F7	314 aa		10.6	□□□□□ -0.71
SF1-206	ENST00000413725	OR6F1	Q8NGZ6	308 aa		10.6	□□□□□ -0.71
SF1-206	ENST00000413725	GIMAP1	Q8WWP7	306 aa		10.6	□□□□□ -0.71
SF1-206	ENST00000413725	S100Z	Q8WXG8	99 aa		10.6	□□□□□ -0.71
SF1-206	ENST00000413725	DUX5	Q96PT3	197 aa		10.6	□□□□□ -0.71
SF1-206	ENST00000413725	ZNF2	Q9BSG1	426 aa	Predicted RBP	10.6	□□□□□ -0.71
SF1-206	ENST00000413725	THAP7	Q9BT49	309 aa	Predicted RBP	10.6	□□□□□ -0.71
SF1-206	ENST00000413725	SRR	Q9GZT4	340 aa		10.6	□□□□□ -0.71
SF1-206	ENST00000413725	ESM1	Q9NQ30	184 aa		10.6	□□□□□ -0.71
SF1-206	ENST00000413725	TNFRSF19	Q9NS68	423 aa		10.6	□□□□□ -0.71
SF1-206	ENST00000413725	PITPNC1	Q9UKF7	332 aa		10.6	□□□□□ -0.71
SF1-206	ENST00000413725	VPREB3	Q9UKI3	123 aa		10.6	□□□□□ -0.71
SF1-206	ENST00000413725	GAB2	Q9UQC2	676 aa		10.6	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms