RNA–Protein interactions for RNA: ENST00000411917.1

PTPA-208, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-208ENST00000411917 CMTM1Q8IZ96 169 aa16.48■□□□□ 0.23
PTPA-208ENST00000411917 SLC5A7Q9GZV3 580 aa16.48■□□□□ 0.23
PTPA-208ENST00000411917 PARP12Q9H0J9 701 aaKnown RBP16.48■□□□□ 0.23
PTPA-208ENST00000411917 C20orf85Q9H1P6 137 aa16.48■□□□□ 0.23
PTPA-208ENST00000411917 TBL2Q9Y4P3 447 aaKnown RBP16.48■□□□□ 0.23
PTPA-208ENST00000411917 MINOS1-NBL1R4GNA1 71 aa16.48■□□□□ 0.23
PTPA-208ENST00000411917 CR1P17927 2039 aa16.48■□□□□ 0.23
PTPA-208ENST00000411917 MYO9AB2RTY4 2548 aa16.47■□□□□ 0.23
PTPA-208ENST00000411917 TOR1AO14656 332 aa16.47■□□□□ 0.23
PTPA-208ENST00000411917 IGLV2-14P01704 120 aa16.47■□□□□ 0.23
PTPA-208ENST00000411917 OR8U9P0C7N5 309 aa16.47■□□□□ 0.23
PTPA-208ENST00000411917 S100GP29377 79 aa16.47■□□□□ 0.23
PTPA-208ENST00000411917 ODF3L1Q8IXM7 274 aa16.47■□□□□ 0.23
PTPA-208ENST00000411917 OR8U1Q8NH10 309 aa16.47■□□□□ 0.23
PTPA-208ENST00000411917 MARCH1Q8TCQ1 289 aa16.47■□□□□ 0.23
PTPA-208ENST00000411917 ST6GALNAC6Q969X2 333 aa16.47■□□□□ 0.23
PTPA-208ENST00000411917 C5orf66Q9H5L9 145 aa16.47■□□□□ 0.23
PTPA-208ENST00000411917 FAM212BQ9NTI7 297 aaPredicted RBP16.47■□□□□ 0.23
PTPA-208ENST00000411917 ZNF221Q9UK13 617 aa16.47■□□□□ 0.23
PTPA-208ENST00000411917 C14orf166Q9Y224 244 aaKnown RBP16.47■□□□□ 0.23
PTPA-208ENST00000411917 VSIG4Q9Y279 399 aa16.47■□□□□ 0.23
PTPA-208ENST00000411917 RBM7Q9Y580 266 aaKnown RBP16.47■□□□□ 0.23
PTPA-208ENST00000411917 MED13LQ71F56 2210 aa16.47■□□□□ 0.23
PTPA-208ENST00000411917 OTOGQ6ZRI0 2925 aa16.47■□□□□ 0.23
PTPA-208ENST00000411917 YLPM1P49750 1951 aaKnown RBP16.46■□□□□ 0.23
PTPA-208ENST00000411917 OOSP1A8MZH6 123 aa16.46■□□□□ 0.23
PTPA-208ENST00000411917 RNASEK-C17orf49H0YIS7 233 aa16.46■□□□□ 0.23
PTPA-208ENST00000411917 TXNL1O43396 289 aa16.46■□□□□ 0.23
PTPA-208ENST00000411917 CD5LO43866 347 aa16.46■□□□□ 0.23
PTPA-208ENST00000411917 FXYD4P59646 89 aa16.46■□□□□ 0.23
PTPA-208ENST00000411917 EIF4EBP1Q13541 118 aaPredicted RBP16.46■□□□□ 0.23
PTPA-208ENST00000411917 TRIM16LQ309B1 348 aa16.46■□□□□ 0.23
PTPA-208ENST00000411917 CCBE1Q6UXH8 406 aaPredicted RBP16.46■□□□□ 0.23
PTPA-208ENST00000411917 ZNF833PQ6ZTB9 187 aa16.46■□□□□ 0.23
PTPA-208ENST00000411917 KCTD9Q7L273 389 aa16.46■□□□□ 0.23
PTPA-208ENST00000411917 CIARTQ8N365 385 aaPredicted RBP16.46■□□□□ 0.23
PTPA-208ENST00000411917 TCTEX1D1Q8N7M0 179 aa16.46■□□□□ 0.23
PTPA-208ENST00000411917 CCDC71LQ8N9Z2 235 aa16.46■□□□□ 0.23
PTPA-208ENST00000411917 OR4P4Q8NGL7 312 aa16.46■□□□□ 0.23
PTPA-208ENST00000411917 SECTM1Q8WVN6 248 aa16.46■□□□□ 0.23
PTPA-208ENST00000411917 TOMM40LQ969M1 308 aa16.46■□□□□ 0.23
PTPA-208ENST00000411917 RTBDNQ9BSG5 229 aaPredicted RBP16.46■□□□□ 0.23
PTPA-208ENST00000411917 OR2D2Q9H210 308 aa16.46■□□□□ 0.23
PTPA-208ENST00000411917 C7orf69Q9H7B7 122 aa16.46■□□□□ 0.23
PTPA-208ENST00000411917 SIRT7Q9NRC8 400 aa16.46■□□□□ 0.23
PTPA-208ENST00000411917 NUDT15Q9NV35 164 aa16.46■□□□□ 0.23
PTPA-208ENST00000411917 BUB1B-PAK6H3BSN5 160 aa16.45■□□□□ 0.22
PTPA-208ENST00000411917 SLC31A2O15432 143 aa16.45■□□□□ 0.22
PTPA-208ENST00000411917 ST8SIA5O15466 376 aa16.45■□□□□ 0.22
PTPA-208ENST00000411917 PRAF2O60831 178 aa16.45■□□□□ 0.22
PTPA-208ENST00000411917 PEX14O75381 377 aa16.45■□□□□ 0.22
PTPA-208ENST00000411917 PGAM2P15259 253 aa16.45■□□□□ 0.22
PTPA-208ENST00000411917 GPR12P47775 334 aa16.45■□□□□ 0.22
PTPA-208ENST00000411917 DHODHQ02127 395 aa16.45■□□□□ 0.22
PTPA-208ENST00000411917 UTF1Q5T230 341 aa16.45■□□□□ 0.22
PTPA-208ENST00000411917 FAM53AQ6NSI3 398 aaPredicted RBP16.45■□□□□ 0.22
PTPA-208ENST00000411917 C11orf88Q6PI97 169 aa16.45■□□□□ 0.22
PTPA-208ENST00000411917 ZNF66Q6ZN08 573 aa16.45■□□□□ 0.22
PTPA-208ENST00000411917 ZNF818PQ6ZRF7 136 aa16.45■□□□□ 0.22
PTPA-208ENST00000411917 SLC25A42Q86VD7 318 aa16.45■□□□□ 0.22
PTPA-208ENST00000411917 CENPSQ8N2Z9 138 aa16.45■□□□□ 0.22
PTPA-208ENST00000411917 PNKDQ8N490 385 aa16.45■□□□□ 0.22
PTPA-208ENST00000411917 MAPK1IP1LQ8NDC0 245 aa16.45■□□□□ 0.22
PTPA-208ENST00000411917 OR10X1Q8NGY0 326 aa16.45■□□□□ 0.22
PTPA-208ENST00000411917 ADTRPQ96IZ2 230 aa16.45■□□□□ 0.22
PTPA-208ENST00000411917 C18orf12Q96KH6 178 aa16.45■□□□□ 0.22
PTPA-208ENST00000411917 S1PR3Q99500 378 aa16.45■□□□□ 0.22
PTPA-208ENST00000411917 HSD17B10Q99714 261 aaKnown RBP16.45■□□□□ 0.22
PTPA-208ENST00000411917 ZNF251Q9BRH9 671 aa16.45■□□□□ 0.22
PTPA-208ENST00000411917 PCGF1Q9BSM1 259 aa16.45■□□□□ 0.22
PTPA-208ENST00000411917 SLC2A9Q9NRM0 540 aa16.45■□□□□ 0.22
PTPA-208ENST00000411917 TMEM160Q9NX00 188 aa16.45■□□□□ 0.22
PTPA-208ENST00000411917 LY6LH3BQJ8 138 aa16.44■□□□□ 0.22
PTPA-208ENST00000411917 IL5P05113 134 aa16.44■□□□□ 0.22
PTPA-208ENST00000411917 H2AFB2P0C5Z0 115 aa16.44■□□□□ 0.22
PTPA-208ENST00000411917 CEACAM3P40198 252 aa16.44■□□□□ 0.22
PTPA-208ENST00000411917 TAGLNQ01995 201 aaKnown RBP16.44■□□□□ 0.22
PTPA-208ENST00000411917 TMEM128Q5BJH2 165 aa16.44■□□□□ 0.22
PTPA-208ENST00000411917 DRAM1Q8N682 238 aa16.44■□□□□ 0.22
PTPA-208ENST00000411917 LEAP2Q969E1 77 aa16.44■□□□□ 0.22
PTPA-208ENST00000411917 GALNT14Q96FL9 552 aa16.44■□□□□ 0.22
PTPA-208ENST00000411917 SDHAF2Q9NX18 166 aa16.44■□□□□ 0.22
PTPA-208ENST00000411917 ITGB1BP2Q9UKP3 347 aa16.44■□□□□ 0.22
PTPA-208ENST00000411917 FLNAP21333 2647 aaKnown RBP16.44■□□□□ 0.22
PTPA-208ENST00000411917 ZNF469Q96JG9 3925 aaPredicted RBP16.43■□□□□ 0.22
PTPA-208ENST00000411917 SAA2-SAA4A0A096LPE2 208 aa16.43■□□□□ 0.22
PTPA-208ENST00000411917 PIGBOS1A0A0B4J2F0 54 aa16.43■□□□□ 0.22
PTPA-208ENST00000411917 RNF212BA8MTL3 300 aa16.43■□□□□ 0.22
PTPA-208ENST00000411917 FSHBP01225 129 aa16.43■□□□□ 0.22
PTPA-208ENST00000411917 SAA2P0DJI9 122 aaPredicted RBP16.43■□□□□ 0.22
PTPA-208ENST00000411917 ZNF16P17020 682 aaPredicted RBP16.43■□□□□ 0.22
PTPA-208ENST00000411917 HTR1DP28221 377 aa16.43■□□□□ 0.22
PTPA-208ENST00000411917 GNG10P50151 68 aa16.43■□□□□ 0.22
PTPA-208ENST00000411917 KRTAP1-1Q07627 177 aa16.43■□□□□ 0.22
PTPA-208ENST00000411917 ZNF816Q0VGE8 651 aaPredicted RBP16.43■□□□□ 0.22
PTPA-208ENST00000411917 ABCA11PQ4W5N1 156 aa16.43■□□□□ 0.22
PTPA-208ENST00000411917 CCL28Q9NRJ3 127 aa16.43■□□□□ 0.22
PTPA-208ENST00000411917 DPM3Q9P2X0 92 aa16.43■□□□□ 0.22
PTPA-208ENST00000411917 KCNS2Q9ULS6 477 aa16.43■□□□□ 0.22
PTPA-208ENST00000411917 IGHV1-69DA0A0B4J2H0 117 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms