RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 TMEM133Q9H2Q1 129 aa11.24□□□□□ -0.61
VAPB-202ENST00000395802 GAB2Q9UQC2 676 aa11.24□□□□□ -0.61
VAPB-202ENST00000395802 APCP25054 2843 aa11.24□□□□□ -0.61
VAPB-202ENST00000395802 IGKV1D-13A0A0B4J2D9 117 aa11.23□□□□□ -0.61
VAPB-202ENST00000395802 KIAA1324LA8MWY0 1029 aaPredicted RBP11.23□□□□□ -0.61
VAPB-202ENST00000395802 HSD17B6O14756 317 aa11.23□□□□□ -0.61
VAPB-202ENST00000395802 RAB29O14966 203 aa11.23□□□□□ -0.61
VAPB-202ENST00000395802 IGKV1-13P0DP09 117 aa11.23□□□□□ -0.61
VAPB-202ENST00000395802 VAMP1P23763 118 aa11.23□□□□□ -0.61
VAPB-202ENST00000395802 GPR12P47775 334 aa11.23□□□□□ -0.61
VAPB-202ENST00000395802 NKX2-5P52952 324 aaPredicted RBP11.23□□□□□ -0.61
VAPB-202ENST00000395802 PRRX1P54821 245 aa11.23□□□□□ -0.61
VAPB-202ENST00000395802 LCN2P80188 198 aa11.23□□□□□ -0.61
VAPB-202ENST00000395802 ZNF818PQ6ZRF7 136 aa11.23□□□□□ -0.61
VAPB-202ENST00000395802 KCTD9Q7L273 389 aa11.23□□□□□ -0.61
VAPB-202ENST00000395802 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.23□□□□□ -0.61
VAPB-202ENST00000395802 OR13D1Q8NGV5 346 aa11.23□□□□□ -0.61
VAPB-202ENST00000395802 OR9G1Q8NH87 305 aa11.23□□□□□ -0.61
VAPB-202ENST00000395802 PHB2Q99623 299 aa11.23□□□□□ -0.61
VAPB-202ENST00000395802 AGMATQ9BSE5 352 aa11.23□□□□□ -0.61
VAPB-202ENST00000395802 ZNF436Q9C0F3 470 aaPredicted RBP11.23□□□□□ -0.61
VAPB-202ENST00000395802 CCL28Q9NRJ3 127 aa11.23□□□□□ -0.61
VAPB-202ENST00000395802 MGAT4CQ9UBM8 478 aa11.23□□□□□ -0.61
VAPB-202ENST00000395802 PSG11Q9UQ72 335 aa11.23□□□□□ -0.61
VAPB-202ENST00000395802 IGHV2-70DA0A0C4DH43 119 aa11.23□□□□□ -0.61
VAPB-202ENST00000395802 C9orf170A2RU37 121 aa11.23□□□□□ -0.61
VAPB-202ENST00000395802 CRYM-AS1A6NIL9 109 aa11.23□□□□□ -0.61
VAPB-202ENST00000395802 B4DSR2 109 aa11.23□□□□□ -0.61
VAPB-202ENST00000395802 TOR1AO14656 332 aa11.23□□□□□ -0.61
VAPB-202ENST00000395802 C1QBP02746 253 aa11.23□□□□□ -0.61
VAPB-202ENST00000395802 PI3P19957 117 aa11.23□□□□□ -0.61
VAPB-202ENST00000395802 IL3RAP26951 378 aa11.23□□□□□ -0.61
VAPB-202ENST00000395802 CATR1Q13166 79 aa11.23□□□□□ -0.61
VAPB-202ENST00000395802 SLC25A48Q6ZT89 311 aaKnown RBP11.23□□□□□ -0.61
VAPB-202ENST00000395802 C12orf45Q8N5I9 185 aaPredicted RBP11.23□□□□□ -0.61
VAPB-202ENST00000395802 LINC00311Q8N616 119 aa11.23□□□□□ -0.61
VAPB-202ENST00000395802 HEXA-AS1Q9H8Q6 139 aa11.23□□□□□ -0.61
VAPB-202ENST00000395802 MPPED1O15442 326 aa11.22□□□□□ -0.61
VAPB-202ENST00000395802 DUS4LO95620 317 aaKnown RBP11.22□□□□□ -0.61
VAPB-202ENST00000395802 IFNA2P01563 188 aa11.22□□□□□ -0.61
VAPB-202ENST00000395802 GATA3P23771 443 aa11.22□□□□□ -0.61
VAPB-202ENST00000395802 ZFP36P26651 326 aaKnown RBP11.22□□□□□ -0.61
VAPB-202ENST00000395802 CD34P28906 385 aa11.22□□□□□ -0.61
VAPB-202ENST00000395802 SUPT4H1P63272 117 aaKnown RBP11.22□□□□□ -0.61
VAPB-202ENST00000395802 SRPXP78539 464 aa11.22□□□□□ -0.61
VAPB-202ENST00000395802 LOXL1Q08397 574 aaPredicted RBP11.22□□□□□ -0.61
VAPB-202ENST00000395802 C2orf68Q2NKX9 166 aa11.22□□□□□ -0.61
VAPB-202ENST00000395802 PHLDA2Q53GA4 152 aa11.22□□□□□ -0.61
VAPB-202ENST00000395802 ABHD12Q8N2K0 398 aa11.22□□□□□ -0.61
VAPB-202ENST00000395802 C11orf42Q8N5U0 333 aa11.22□□□□□ -0.61
VAPB-202ENST00000395802 OR10X1Q8NGY0 326 aa11.22□□□□□ -0.61
VAPB-202ENST00000395802 COQ8AQ8NI60 647 aa11.22□□□□□ -0.61
VAPB-202ENST00000395802 ZNF596Q8TC21 504 aa11.22□□□□□ -0.61
VAPB-202ENST00000395802 MITD1Q8WV92 249 aa11.22□□□□□ -0.61
VAPB-202ENST00000395802 GALNT14Q96FL9 552 aa11.22□□□□□ -0.61
VAPB-202ENST00000395802 S1PR3Q99500 378 aa11.22□□□□□ -0.61
VAPB-202ENST00000395802 HSD17B10Q99714 261 aaKnown RBP11.22□□□□□ -0.61
VAPB-202ENST00000395802 SUCNR1Q9BXA5 334 aa11.22□□□□□ -0.61
VAPB-202ENST00000395802 NAA60Q9H7X0 242 aa11.22□□□□□ -0.61
VAPB-202ENST00000395802 UNKLQ9H9P5 680 aaKnown RBP11.22□□□□□ -0.61
VAPB-202ENST00000395802 POLQO75417 2590 aa11.22□□□□□ -0.61
VAPB-202ENST00000395802 UNC79Q9P2D8 2635 aa11.22□□□□□ -0.61
VAPB-202ENST00000395802 SMLR1H3BR10 107 aa11.21□□□□□ -0.61
VAPB-202ENST00000395802 ST8SIA5O15466 376 aa11.21□□□□□ -0.61
VAPB-202ENST00000395802 MMP23AO75900 390 aa11.21□□□□□ -0.61
VAPB-202ENST00000395802 OR2A4O95047 310 aa11.21□□□□□ -0.61
VAPB-202ENST00000395802 SFT2D2O95562 160 aa11.21□□□□□ -0.61
VAPB-202ENST00000395802 PRTN3P24158 256 aa11.21□□□□□ -0.61
VAPB-202ENST00000395802 ARF6P62330 175 aa11.21□□□□□ -0.61
VAPB-202ENST00000395802 NCR3LG1Q68D85 454 aa11.21□□□□□ -0.61
VAPB-202ENST00000395802 ZNF66Q6ZN08 573 aa11.21□□□□□ -0.61
VAPB-202ENST00000395802 NOXA1Q86UR1 476 aa11.21□□□□□ -0.61
VAPB-202ENST00000395802 TCTEX1D1Q8N7M0 179 aa11.21□□□□□ -0.61
VAPB-202ENST00000395802 OR2A7Q96R45 310 aa11.21□□□□□ -0.61
VAPB-202ENST00000395802 FOXC2Q99958 501 aa11.21□□□□□ -0.61
VAPB-202ENST00000395802 CLEC7AQ9BXN2 247 aa11.21□□□□□ -0.61
VAPB-202ENST00000395802 LIN7CQ9NUP9 197 aaKnown RBP11.21□□□□□ -0.61
VAPB-202ENST00000395802 YLPM1P49750 1951 aaKnown RBP11.21□□□□□ -0.61
VAPB-202ENST00000395802 J3QR06 171 aa11.21□□□□□ -0.62
VAPB-202ENST00000395802 PGLYRP1O75594 196 aaPredicted RBP11.21□□□□□ -0.62
VAPB-202ENST00000395802 GZMKP49863 264 aa11.21□□□□□ -0.62
VAPB-202ENST00000395802 ZNF134P52741 427 aa11.21□□□□□ -0.62
VAPB-202ENST00000395802 DVL1P1P54792 670 aaPredicted RBP11.21□□□□□ -0.62
VAPB-202ENST00000395802 H2BFSP57053 126 aa11.21□□□□□ -0.62
VAPB-202ENST00000395802 CT45A1Q5HYN5 189 aa11.21□□□□□ -0.62
VAPB-202ENST00000395802 FAM71F2Q6NXP2 309 aa11.21□□□□□ -0.62
VAPB-202ENST00000395802 TBC1D26Q86UD7 250 aa11.21□□□□□ -0.62
VAPB-202ENST00000395802 LDLRAD3Q86YD5 345 aa11.21□□□□□ -0.62
VAPB-202ENST00000395802 LYG1Q8N1E2 194 aa11.21□□□□□ -0.62
VAPB-202ENST00000395802 DRAM1Q8N682 238 aa11.21□□□□□ -0.62
VAPB-202ENST00000395802 ZNF439Q8NDP4 499 aa11.21□□□□□ -0.62
VAPB-202ENST00000395802 BEND2Q8NDZ0 799 aa11.21□□□□□ -0.62
VAPB-202ENST00000395802 CT45A3Q8NHU0 189 aa11.21□□□□□ -0.62
VAPB-202ENST00000395802 TMEM186Q96B77 213 aa11.21□□□□□ -0.62
VAPB-202ENST00000395802 IFI27L2Q9H2X8 130 aa11.21□□□□□ -0.62
VAPB-202ENST00000395802 RNF150Q9ULK6 438 aa11.21□□□□□ -0.62
VAPB-202ENST00000395802 AMMECR1Q9Y4X0 333 aaPredicted RBP11.21□□□□□ -0.62
VAPB-202ENST00000395802 CSMD2Q7Z408 3487 aa11.2□□□□□ -0.62
VAPB-202ENST00000395802 A0A0B4J2A0 478 aa11.2□□□□□ -0.62
VAPB-202ENST00000395802 C3orf85A0A1B0GTC6 90 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms