RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 ZNF818PQ6ZRF7 136 aa12.34□□□□□ -0.43
TCOF1-202ENST00000377797 C14orf79Q96F83 325 aa12.34□□□□□ -0.43
TCOF1-202ENST00000377797 HARBI1Q96MB7 349 aa12.34□□□□□ -0.43
TCOF1-202ENST00000377797 WNT5AP41221 380 aa12.34□□□□□ -0.43
TCOF1-202ENST00000377797 UCP3P55916 312 aa12.34□□□□□ -0.43
TCOF1-202ENST00000377797 CXorf66Q5JRM2 361 aaPredicted RBP12.34□□□□□ -0.43
TCOF1-202ENST00000377797 COMMD1Q8N668 190 aa12.34□□□□□ -0.43
TCOF1-202ENST00000377797 SAT2Q96F10 170 aaPredicted RBP12.34□□□□□ -0.43
TCOF1-202ENST00000377797 ZNF714Q96N38 554 aa12.34□□□□□ -0.43
TCOF1-202ENST00000377797 TMEM147Q9BVK8 224 aa12.34□□□□□ -0.43
TCOF1-202ENST00000377797 AMMECR1Q9Y4X0 333 aaPredicted RBP12.34□□□□□ -0.43
TCOF1-202ENST00000377797 SSTR5P35346 364 aa12.33□□□□□ -0.44
TCOF1-202ENST00000377797 SULT1A1P50225 295 aa12.33□□□□□ -0.44
TCOF1-202ENST00000377797 KCNIP4Q6PIL6 250 aa12.33□□□□□ -0.44
TCOF1-202ENST00000377797 DTX1Q86Y01 620 aa12.33□□□□□ -0.44
TCOF1-202ENST00000377797 HES4Q9HCC6 221 aa12.33□□□□□ -0.44
TCOF1-202ENST00000377797 MBPP02686 304 aaPredicted RBP12.33□□□□□ -0.44
TCOF1-202ENST00000377797 OTX1P32242 354 aaPredicted RBP12.33□□□□□ -0.44
TCOF1-202ENST00000377797 OPRK1P41145 380 aa12.33□□□□□ -0.44
TCOF1-202ENST00000377797 FAM166AQ6J272 317 aa12.33□□□□□ -0.44
TCOF1-202ENST00000377797 TMEM88Q6PEY1 159 aa12.33□□□□□ -0.44
TCOF1-202ENST00000377797 UQCC3Q6UW78 93 aa12.33□□□□□ -0.44
TCOF1-202ENST00000377797 ACP7Q6ZNF0 438 aa12.33□□□□□ -0.44
TCOF1-202ENST00000377797 CMTM2Q8TAZ6 248 aa12.33□□□□□ -0.44
TCOF1-202ENST00000377797 INSIG2Q9Y5U4 225 aa12.33□□□□□ -0.44
TCOF1-202ENST00000377797 ZGRF1Q86YA3 2104 aa12.33□□□□□ -0.44
TCOF1-202ENST00000377797 A0A0A6YYD4 124 aa12.33□□□□□ -0.44
TCOF1-202ENST00000377797 UBE2G2P60604 165 aa12.33□□□□□ -0.44
TCOF1-202ENST00000377797 ATP6V1FQ16864 119 aa12.33□□□□□ -0.44
TCOF1-202ENST00000377797 FAM209AQ5JX71 171 aa12.33□□□□□ -0.44
TCOF1-202ENST00000377797 FAM201AQ5SY85 155 aa12.33□□□□□ -0.44
TCOF1-202ENST00000377797 RNF144BQ7Z419 303 aa12.33□□□□□ -0.44
TCOF1-202ENST00000377797 GCSAMQ8N6F7 178 aa12.33□□□□□ -0.44
TCOF1-202ENST00000377797 NEIL1Q96FI4 390 aaPredicted RBP12.33□□□□□ -0.44
TCOF1-202ENST00000377797 ATP5SQ99766 215 aa12.33□□□□□ -0.44
TCOF1-202ENST00000377797 ASCL3Q9NQ33 180 aa12.33□□□□□ -0.44
TCOF1-202ENST00000377797 IGKV1-12A0A0C4DH73 117 aa12.33□□□□□ -0.44
TCOF1-202ENST00000377797 K7N7A8 449 aa12.33□□□□□ -0.44
TCOF1-202ENST00000377797 IGKV1D-12P01611 117 aa12.33□□□□□ -0.44
TCOF1-202ENST00000377797 POC1AQ8NBT0 407 aa12.33□□□□□ -0.44
TCOF1-202ENST00000377797 SMIM7Q9BQ49 75 aa12.33□□□□□ -0.44
TCOF1-202ENST00000377797 CFDP00746 253 aaPredicted RBP12.32□□□□□ -0.44
TCOF1-202ENST00000377797 IFITM2Q01629 132 aa12.32□□□□□ -0.44
TCOF1-202ENST00000377797 FLYWCH2Q96CP2 140 aaKnown RBP12.32□□□□□ -0.44
TCOF1-202ENST00000377797 OR51I2Q9H344 312 aa12.32□□□□□ -0.44
TCOF1-202ENST00000377797 CDRT15L2A8MXV6 281 aa12.32□□□□□ -0.44
TCOF1-202ENST00000377797 GPR6P46095 362 aaPredicted RBP12.32□□□□□ -0.44
TCOF1-202ENST00000377797 BSPH1Q075Z2 132 aa12.32□□□□□ -0.44
TCOF1-202ENST00000377797 TMEM252Q8N6L7 170 aa12.32□□□□□ -0.44
TCOF1-202ENST00000377797 BPIFCQ8NFQ6 507 aa12.32□□□□□ -0.44
TCOF1-202ENST00000377797 RHOVQ96L33 236 aa12.32□□□□□ -0.44
TCOF1-202ENST00000377797 LPAR3Q9UBY5 353 aa12.32□□□□□ -0.44
TCOF1-202ENST00000377797 C2orf68Q2NKX9 166 aa12.32□□□□□ -0.44
TCOF1-202ENST00000377797 MUC15Q8N387 334 aa12.32□□□□□ -0.44
TCOF1-202ENST00000377797 ZNF645Q8N7E2 425 aa12.32□□□□□ -0.44
TCOF1-202ENST00000377797 MAP1LC3B2A6NCE7 125 aa12.32□□□□□ -0.44
TCOF1-202ENST00000377797 TRIM77I1YAP6 450 aa12.32□□□□□ -0.44
TCOF1-202ENST00000377797 SLC35E4Q6ICL7 350 aa12.32□□□□□ -0.44
TCOF1-202ENST00000377797 Q6ZS92 163 aa12.32□□□□□ -0.44
TCOF1-202ENST00000377797 TMEM171Q8WVE6 324 aa12.32□□□□□ -0.44
TCOF1-202ENST00000377797 SAMD10Q9BYL1 202 aa12.32□□□□□ -0.44
TCOF1-202ENST00000377797 MAP1LC3BQ9GZQ8 125 aa12.32□□□□□ -0.44
TCOF1-202ENST00000377797 GNB4Q9HAV0 340 aa12.32□□□□□ -0.44
TCOF1-202ENST00000377797 NIT2Q9NQR4 276 aa12.32□□□□□ -0.44
TCOF1-202ENST00000377797 PLSCR4Q9NRQ2 329 aa12.32□□□□□ -0.44
TCOF1-202ENST00000377797 DEDDO75618 318 aa12.31□□□□□ -0.44
TCOF1-202ENST00000377797 IGHG3P01860 377 aa12.31□□□□□ -0.44
TCOF1-202ENST00000377797 MGST1P10620 155 aaKnown RBP12.31□□□□□ -0.44
TCOF1-202ENST00000377797 ZNF66Q6ZN08 573 aa12.31□□□□□ -0.44
TCOF1-202ENST00000377797 PIP4P1Q86T03 277 aa12.31□□□□□ -0.44
TCOF1-202ENST00000377797 FGFRL1Q8N441 504 aa12.31□□□□□ -0.44
TCOF1-202ENST00000377797 LEAP2Q969E1 77 aa12.31□□□□□ -0.44
TCOF1-202ENST00000377797 SNRNP40Q96DI7 357 aaKnown RBP12.31□□□□□ -0.44
TCOF1-202ENST00000377797 STARD4Q96DR4 205 aa12.31□□□□□ -0.44
TCOF1-202ENST00000377797 FAM157AC9JC47 383 aa12.31□□□□□ -0.44
TCOF1-202ENST00000377797 SFTA3P0C7M3 94 aa12.31□□□□□ -0.44
TCOF1-202ENST00000377797 HIST1H3AP68431 136 aa12.31□□□□□ -0.44
TCOF1-202ENST00000377797 IZUMO4Q1ZYL8 232 aa12.31□□□□□ -0.44
TCOF1-202ENST00000377797 HIST2H3AQ71DI3 136 aa12.31□□□□□ -0.44
TCOF1-202ENST00000377797 MISP3Q96FF7 219 aa12.31□□□□□ -0.44
TCOF1-202ENST00000377797 HEXA-AS1Q9H8Q6 139 aa12.31□□□□□ -0.44
TCOF1-202ENST00000377797 SLC25A22Q9H936 323 aa12.31□□□□□ -0.44
TCOF1-202ENST00000377797 WNK2Q9Y3S1 2297 aa12.31□□□□□ -0.44
TCOF1-202ENST00000377797 IFNL4K9M1U5 179 aa12.31□□□□□ -0.44
TCOF1-202ENST00000377797 LDLRAD4O15165 306 aa12.31□□□□□ -0.44
TCOF1-202ENST00000377797 HPRT1P00492 218 aa12.31□□□□□ -0.44
TCOF1-202ENST00000377797 BPIFB3P59826 476 aa12.31□□□□□ -0.44
TCOF1-202ENST00000377797 FLI1Q01543 452 aaPredicted RBP12.31□□□□□ -0.44
TCOF1-202ENST00000377797 FOXL2NBQ6ZUU3 175 aa12.31□□□□□ -0.44
TCOF1-202ENST00000377797 ZFP82Q8N141 532 aa12.31□□□□□ -0.44
TCOF1-202ENST00000377797 WSB1Q9Y6I7 421 aa12.31□□□□□ -0.44
TCOF1-202ENST00000377797 GTF3C1Q12789 2109 aa12.31□□□□□ -0.44
TCOF1-202ENST00000377797 C12orf77C9JDV5 145 aa12.31□□□□□ -0.44
TCOF1-202ENST00000377797 H7BYZ3 331 aa12.31□□□□□ -0.44
TCOF1-202ENST00000377797 COX7A2P2O60397 106 aa12.31□□□□□ -0.44
TCOF1-202ENST00000377797 DVL1P1P54792 670 aaPredicted RBP12.31□□□□□ -0.44
TCOF1-202ENST00000377797 TMEM187Q14656 261 aa12.31□□□□□ -0.44
TCOF1-202ENST00000377797 TNXAQ16473 311 aa12.31□□□□□ -0.44
TCOF1-202ENST00000377797 ZNF660Q6AZW8 331 aaPredicted RBP12.31□□□□□ -0.44
TCOF1-202ENST00000377797 HSD17B13Q7Z5P4 300 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms