RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 FAM90A13PP0C7W8 464 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 FAM90A14PP0C7W9 464 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 FAM90A24PP0C7X0 464 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 BCL2L2Q92843 193 aaPredicted RBP10.93□□□□□ -0.66
USP11-204ENST00000377107 ZDHHC16Q969W1 377 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 MIOXQ9UGB7 285 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 MAP1LC3B2A6NCE7 125 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 LINC00587B1AMM8 73 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 CXCL1P09341 107 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 ZNF709Q8N972 641 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 MAP1LC3BQ9GZQ8 125 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 TMEM9BQ9NQ34 198 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 ZFHX4Q86UP3 3567 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 ABCA1O95477 2261 aa10.92□□□□□ -0.66
USP11-204ENST00000377107 A0A1B0GU03 582 aa10.92□□□□□ -0.66
USP11-204ENST00000377107 AP4M1O00189 453 aa10.92□□□□□ -0.66
USP11-204ENST00000377107 GLIPR1P48060 266 aa10.92□□□□□ -0.66
USP11-204ENST00000377107 UCP2P55851 309 aa10.92□□□□□ -0.66
USP11-204ENST00000377107 UBE2G2P60604 165 aa10.92□□□□□ -0.66
USP11-204ENST00000377107 VWA1Q6PCB0 445 aa10.92□□□□□ -0.66
USP11-204ENST00000377107 ODF3L1Q8IXM7 274 aa10.92□□□□□ -0.66
USP11-204ENST00000377107 SAXO1Q8IYX7 474 aa10.92□□□□□ -0.66
USP11-204ENST00000377107 LYPD6BQ8NI32 183 aa10.92□□□□□ -0.66
USP11-204ENST00000377107 Q8WTZ3 238 aa10.92□□□□□ -0.66
USP11-204ENST00000377107 DDA1Q9BW61 102 aa10.92□□□□□ -0.66
USP11-204ENST00000377107 SCRT1Q9BWW7 348 aa10.92□□□□□ -0.66
USP11-204ENST00000377107 A0A0U1RQK1 487 aa10.92□□□□□ -0.66
USP11-204ENST00000377107 S100PP25815 95 aa10.92□□□□□ -0.66
USP11-204ENST00000377107 GCH1P30793 250 aa10.92□□□□□ -0.66
USP11-204ENST00000377107 NKX6-1P78426 367 aaPredicted RBP10.92□□□□□ -0.66
USP11-204ENST00000377107 WDR25Q64LD2 544 aaPredicted RBP10.92□□□□□ -0.66
USP11-204ENST00000377107 TMEM178AQ8NBL3 297 aa10.92□□□□□ -0.66
USP11-204ENST00000377107 DEFB108BQ8NET1 73 aa10.92□□□□□ -0.66
USP11-204ENST00000377107 KLF14Q8TD94 323 aaPredicted RBP10.92□□□□□ -0.66
USP11-204ENST00000377107 IGHV3OR15-7A0A075B7D8 119 aa10.92□□□□□ -0.66
USP11-204ENST00000377107 C21orf140B9A014 251 aa10.92□□□□□ -0.66
USP11-204ENST00000377107 CLN5O75503 358 aa10.92□□□□□ -0.66
USP11-204ENST00000377107 CD59P13987 128 aa10.92□□□□□ -0.66
USP11-204ENST00000377107 IGHV1-2P23083 117 aa10.92□□□□□ -0.66
USP11-204ENST00000377107 ERVFRD-1P60508 538 aa10.92□□□□□ -0.66
USP11-204ENST00000377107 SMIM7Q9BQ49 75 aa10.92□□□□□ -0.66
USP11-204ENST00000377107 GAB2Q9UQC2 676 aa10.92□□□□□ -0.66
USP11-204ENST00000377107 CHD3Q12873 2000 aaKnown RBP10.92□□□□□ -0.66
USP11-204ENST00000377107 SPAARA0A1B0GVQ0 90 aa10.91□□□□□ -0.66
USP11-204ENST00000377107 C5orf52A6NGY3 159 aa10.91□□□□□ -0.66
USP11-204ENST00000377107 SMPD2O60906 423 aa10.91□□□□□ -0.66
USP11-204ENST00000377107 S1PR2O95136 353 aa10.91□□□□□ -0.66
USP11-204ENST00000377107 HBZP02008 142 aa10.91□□□□□ -0.66
USP11-204ENST00000377107 SP9P0CG40 484 aa10.91□□□□□ -0.66
USP11-204ENST00000377107 HNF1AP20823 631 aa10.91□□□□□ -0.66
USP11-204ENST00000377107 H2BFWTQ7Z2G1 175 aa10.91□□□□□ -0.66
USP11-204ENST00000377107 VKORC1L1Q8N0U8 176 aa10.91□□□□□ -0.66
USP11-204ENST00000377107 OR2Z1Q8NG97 314 aa10.91□□□□□ -0.66
USP11-204ENST00000377107 CLDND2Q8NHS1 167 aa10.91□□□□□ -0.66
USP11-204ENST00000377107 RCC1LQ96I51 464 aaKnown RBP10.91□□□□□ -0.66
USP11-204ENST00000377107 METRNQ9UJH8 293 aa10.91□□□□□ -0.66
USP11-204ENST00000377107 MRPS18CQ9Y3D5 142 aaKnown RBP10.91□□□□□ -0.66
USP11-204ENST00000377107 ZG16O60844 167 aa10.91□□□□□ -0.66
USP11-204ENST00000377107 EGR1P18146 543 aa10.91□□□□□ -0.66
USP11-204ENST00000377107 FGF7P21781 194 aa10.91□□□□□ -0.66
USP11-204ENST00000377107 OR10D4PQ8NGN7 298 aa10.91□□□□□ -0.66
USP11-204ENST00000377107 OR4F5Q8NH21 305 aa10.91□□□□□ -0.66
USP11-204ENST00000377107 OR4F4Q96R69 305 aa10.91□□□□□ -0.66
USP11-204ENST00000377107 RNF115Q9Y4L5 304 aa10.91□□□□□ -0.66
USP11-204ENST00000377107 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.91□□□□□ -0.66
USP11-204ENST00000377107 C12orf77C9JDV5 145 aa10.91□□□□□ -0.66
USP11-204ENST00000377107 COX5BP10606 129 aa10.91□□□□□ -0.66
USP11-204ENST00000377107 RPL30P62888 115 aaKnown RBP10.91□□□□□ -0.66
USP11-204ENST00000377107 GFI1BQ5VTD9 330 aa10.91□□□□□ -0.66
USP11-204ENST00000377107 CST9LP1Q5W188 147 aa10.91□□□□□ -0.66
USP11-204ENST00000377107 SSX7Q7RTT5 188 aa10.91□□□□□ -0.66
USP11-204ENST00000377107 LEAP2Q969E1 77 aa10.91□□□□□ -0.66
USP11-204ENST00000377107 TMEM204Q9BSN7 226 aa10.91□□□□□ -0.66
USP11-204ENST00000377107 CABLES2Q9BTV7 478 aa10.91□□□□□ -0.66
USP11-204ENST00000377107 RBKSQ9H477 322 aa10.91□□□□□ -0.66
USP11-204ENST00000377107 KIAA1549Q9HCM3 1950 aa10.9□□□□□ -0.66
USP11-204ENST00000377107 C17orf98A8MV24 154 aa10.9□□□□□ -0.66
USP11-204ENST00000377107 ZNF737O75373 536 aa10.9□□□□□ -0.66
USP11-204ENST00000377107 OR8U8P0C7N1 319 aa10.9□□□□□ -0.66
USP11-204ENST00000377107 MDH2P40926 338 aaKnown RBP10.9□□□□□ -0.66
USP11-204ENST00000377107 ZNF585BQ52M93 769 aa10.9□□□□□ -0.66
USP11-204ENST00000377107 C9orf152Q5JTZ5 239 aa10.9□□□□□ -0.66
USP11-204ENST00000377107 Q6P435 159 aa10.9□□□□□ -0.66
USP11-204ENST00000377107 GATAD1Q8WUU5 269 aa10.9□□□□□ -0.66
USP11-204ENST00000377107 IER2Q9BTL4 223 aa10.9□□□□□ -0.66
USP11-204ENST00000377107 DOK5Q9P104 306 aa10.9□□□□□ -0.66
USP11-204ENST00000377107 TMEM30CPA0ZSE6 113 aa10.9□□□□□ -0.66
USP11-204ENST00000377107 IFNA10P01566 189 aa10.9□□□□□ -0.66
USP11-204ENST00000377107 EIF2S3P41091 472 aaKnown RBP10.9□□□□□ -0.66
USP11-204ENST00000377107 NRN1LQ496H8 165 aa10.9□□□□□ -0.66
USP11-204ENST00000377107 S100PBPQ96BU1 408 aa10.9□□□□□ -0.66
USP11-204ENST00000377107 CDX4O14627 284 aaPredicted RBP10.89□□□□□ -0.67
USP11-204ENST00000377107 AGAP20933 346 aa10.89□□□□□ -0.67
USP11-204ENST00000377107 MSMO1Q15800 293 aa10.89□□□□□ -0.67
USP11-204ENST00000377107 ZNF525Q8N782 197 aa10.89□□□□□ -0.67
USP11-204ENST00000377107 ZNF610Q8N9Z0 462 aa10.89□□□□□ -0.67
USP11-204ENST00000377107 DEFB124Q8NES8 71 aa10.89□□□□□ -0.67
USP11-204ENST00000377107 FDCSPQ8NFU4 85 aa10.89□□□□□ -0.67
USP11-204ENST00000377107 SNIP1Q8TAD8 396 aaKnown RBP10.89□□□□□ -0.67
USP11-204ENST00000377107 SSX3Q99909 188 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms